RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 PRCDQ00LT1 54 aa20.89■□□□□ 0.93
U2AF1-208ENST00000471250 HABP2Q14520 560 aaPredicted RBP20.89■□□□□ 0.93
U2AF1-208ENST00000471250 RNF141Q8WVD5 230 aa20.89■□□□□ 0.93
U2AF1-208ENST00000471250 CFHR4Q92496 578 aa20.89■□□□□ 0.93
U2AF1-208ENST00000471250 TBL2Q9Y4P3 447 aaKnown RBP20.89■□□□□ 0.93
U2AF1-208ENST00000471250 LGALS4P56470 323 aa20.88■□□□□ 0.93
U2AF1-208ENST00000471250 SLC38A11Q08AI6 406 aa20.88■□□□□ 0.93
U2AF1-208ENST00000471250 HSD17B11Q8NBQ5 300 aa20.88■□□□□ 0.93
U2AF1-208ENST00000471250 ENY2Q9NPA8 101 aa20.88■□□□□ 0.93
U2AF1-208ENST00000471250 AUP1Q9Y679 476 aa20.88■□□□□ 0.93
U2AF1-208ENST00000471250 UTP20O75691 2785 aaKnown RBP20.88■□□□□ 0.93
U2AF1-208ENST00000471250 SLC25A17O43808 307 aa20.87■□□□□ 0.93
U2AF1-208ENST00000471250 SCAF4O95104 1147 aaKnown RBP20.87■□□□□ 0.93
U2AF1-208ENST00000471250 CRYGBP07316 175 aa20.87■□□□□ 0.93
U2AF1-208ENST00000471250 OR8G2PQ6IF36 304 aa20.87■□□□□ 0.93
U2AF1-208ENST00000471250 LILRB2Q8N423 598 aa20.87■□□□□ 0.93
U2AF1-208ENST00000471250 PLA2G2EQ9NZK7 142 aa20.87■□□□□ 0.93
U2AF1-208ENST00000471250 VENTXO95231 258 aa20.86■□□□□ 0.93
U2AF1-208ENST00000471250 PSG5Q15238 335 aa20.86■□□□□ 0.93
U2AF1-208ENST00000471250 ATP6V1FQ16864 119 aa20.86■□□□□ 0.93
U2AF1-208ENST00000471250 CCDC144NLQ6NUI1 221 aa20.86■□□□□ 0.93
U2AF1-208ENST00000471250 THNSL2Q86YJ6 484 aa20.86■□□□□ 0.93
U2AF1-208ENST00000471250 CXorf58Q96LI9 332 aa20.86■□□□□ 0.93
U2AF1-208ENST00000471250 IFNA10P01566 189 aa20.86■□□□□ 0.93
U2AF1-208ENST00000471250 IFNA5P01569 189 aa20.86■□□□□ 0.93
U2AF1-208ENST00000471250 SULT1A2P50226 295 aa20.86■□□□□ 0.93
U2AF1-208ENST00000471250 LRRC75A-AS1Q8N1F1 130 aa20.86■□□□□ 0.93
U2AF1-208ENST00000471250 OR10P1Q8NGE3 313 aa20.86■□□□□ 0.93
U2AF1-208ENST00000471250 OR1L8Q8NGR8 309 aa20.86■□□□□ 0.93
U2AF1-208ENST00000471250 COMMD5Q9GZQ3 224 aa20.86■□□□□ 0.93
U2AF1-208ENST00000471250 ZNF430Q9H8G1 570 aaPredicted RBP20.86■□□□□ 0.93
U2AF1-208ENST00000471250 MED9Q9NWA0 146 aa20.86■□□□□ 0.93
U2AF1-208ENST00000471250 CNTFRP26992 372 aa20.85■□□□□ 0.93
U2AF1-208ENST00000471250 ATP6V0CP27449 155 aa20.85■□□□□ 0.93
U2AF1-208ENST00000471250 MRGPRG-AS1Q2M3A8 158 aa20.85■□□□□ 0.93
U2AF1-208ENST00000471250 DEFB113Q30KQ7 82 aa20.85■□□□□ 0.93
U2AF1-208ENST00000471250 PINX1Q96BK5 328 aaKnown RBP20.85■□□□□ 0.93
U2AF1-208ENST00000471250 HINT2Q9BX68 163 aa20.85■□□□□ 0.93
U2AF1-208ENST00000471250 PLEKHA3Q9HB20 300 aa20.85■□□□□ 0.93
U2AF1-208ENST00000471250 NDUFA4L2Q9NRX3 87 aa20.85■□□□□ 0.93
U2AF1-208ENST00000471250 OPN1MWP04001 364 aa20.84■□□□□ 0.93
U2AF1-208ENST00000471250 OPN1MW2P0DN77 364 aa20.84■□□□□ 0.93
U2AF1-208ENST00000471250 OPN1MW3P0DN78 364 aa20.84■□□□□ 0.93
U2AF1-208ENST00000471250 SSX2Q16385 188 aa20.84■□□□□ 0.93
U2AF1-208ENST00000471250 DYNAPQ8N1N2 210 aa20.84■□□□□ 0.93
U2AF1-208ENST00000471250 PARD6GQ9BYG4 376 aaPredicted RBP20.84■□□□□ 0.93
U2AF1-208ENST00000471250 SH3BGRL3Q9H299 93 aa20.84■□□□□ 0.93
U2AF1-208ENST00000471250 TPSG1Q9NRR2 321 aa20.84■□□□□ 0.93
U2AF1-208ENST00000471250 GNPNAT1Q96EK6 184 aaPredicted RBP20.83■□□□□ 0.93
U2AF1-208ENST00000471250 C1orf159Q96HA4 380 aa20.83■□□□□ 0.93
U2AF1-208ENST00000471250 RRHO14718 337 aa20.83■□□□□ 0.92
U2AF1-208ENST00000471250 MSMBP08118 114 aa20.83■□□□□ 0.92
U2AF1-208ENST00000471250 OR8U8P0C7N1 319 aa20.83■□□□□ 0.92
U2AF1-208ENST00000471250 COMMD7Q86VX2 200 aa20.83■□□□□ 0.92
U2AF1-208ENST00000471250 TMEM170AQ8WVE7 144 aa20.83■□□□□ 0.92
U2AF1-208ENST00000471250 C17orf50Q8WW18 174 aa20.83■□□□□ 0.92
U2AF1-208ENST00000471250 MALSU1Q96EH3 234 aa20.83■□□□□ 0.92
U2AF1-208ENST00000471250 SIGLEC9Q9Y336 463 aa20.83■□□□□ 0.92
U2AF1-208ENST00000471250 ABCA2Q9BZC7 2435 aa20.82■□□□□ 0.92
U2AF1-208ENST00000471250 A0A096LNT2 108 aa20.82■□□□□ 0.92
U2AF1-208ENST00000471250 INS-IGF2F8WCM5 200 aa20.82■□□□□ 0.92
U2AF1-208ENST00000471250 PRSS8Q16651 343 aa20.82■□□□□ 0.92
U2AF1-208ENST00000471250 LRRC75BQ2VPJ9 315 aa20.82■□□□□ 0.92
U2AF1-208ENST00000471250 MMD2Q8IY49 270 aa20.82■□□□□ 0.92
U2AF1-208ENST00000471250 SLC24A4Q8NFF2 622 aa20.82■□□□□ 0.92
U2AF1-208ENST00000471250 SCGB1C1Q8TD33 95 aa20.82■□□□□ 0.92
U2AF1-208ENST00000471250 SAT2Q96F10 170 aaPredicted RBP20.82■□□□□ 0.92
U2AF1-208ENST00000471250 AJUBAQ96IF1 538 aa20.82■□□□□ 0.92
U2AF1-208ENST00000471250 TMEM147Q9BVK8 224 aa20.82■□□□□ 0.92
U2AF1-208ENST00000471250 SPG11Q96JI7 2443 aa20.82■□□□□ 0.92
U2AF1-208ENST00000471250 MED13LQ71F56 2210 aa20.82■□□□□ 0.92
U2AF1-208ENST00000471250 RAB11AP62491 216 aa20.81■□□□□ 0.92
U2AF1-208ENST00000471250 SLC25A24Q6NUK1 477 aa20.81■□□□□ 0.92
U2AF1-208ENST00000471250 ETV3LQ6ZN32 361 aa20.81■□□□□ 0.92
U2AF1-208ENST00000471250 CENPVL3A0A0U1RRI6 287 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 ZNF705EA8MWA4 302 aaPredicted RBP20.8■□□□□ 0.92
U2AF1-208ENST00000471250 B4DSR2 109 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 MOSP00540 346 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 IGKV1D-33P01593 117 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 IGKV1-33P01594 117 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 NPY1RP25929 384 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 PAX6P26367 422 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 PJVKQ0ZLH3 352 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 VWC2Q2TAL6 325 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 METTL1Q9UBP6 276 aaKnown RBP20.8■□□□□ 0.92
U2AF1-208ENST00000471250 PFDN2Q9UHV9 154 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 TNCP24821 2201 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 WNK2Q9Y3S1 2297 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 A0A1W2PN81 502 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 CGB1A6NKQ9 187 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 NPFFO15130 113 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 MAS1LP35410 378 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 CHRNA7P36544 502 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 F2RL1P55085 397 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 RUNX1Q01196 453 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 OR2G3Q8NGZ4 309 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 WDR61Q9GZS3 305 aaKnown RBP20.8■□□□□ 0.92
U2AF1-208ENST00000471250 UQCC1Q9NVA1 299 aa20.8■□□□□ 0.92
U2AF1-208ENST00000471250 USP9YO00507 2555 aaPredicted RBP20.79■□□□□ 0.92
U2AF1-208ENST00000471250 PRSS46E5RG02 174 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms