RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 TBPL2Q6SJ96 375 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 Q8N2B8 174 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 LY6G5BQ8NDX9 201 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 OR51G1Q8NGK1 321 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 RORBQ92753 470 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 TNFRSF14Q92956 283 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 CCDC124Q96CT7 223 aaKnown RBP3.72□□□□□ -1.81
CKS1B-204ENST00000471245 SEH1LQ96EE3 360 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 OR5B12Q96R08 314 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 NAA50Q9GZZ1 169 aaKnown RBP3.72□□□□□ -1.81
CKS1B-204ENST00000471245 SYT4Q9H2B2 425 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 MED31Q9Y3C7 131 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 ALMS1Q8TCU4 4167 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 A0A087WUU8 490 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 IGLV1-36A0A0B4J1U3 117 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 MPDU1O75352 247 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 LHBP01229 141 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 CD14P08571 375 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 HTR2CP28335 458 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 LSM6P62312 80 aaKnown RBP3.71□□□□□ -1.82
CKS1B-204ENST00000471245 RAP1AP62834 184 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 MXD1Q05195 221 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 KCNJ8Q15842 424 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 LRRC75BQ2VPJ9 315 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 ZFAND6Q6FIF0 208 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 HCP5Q6MZN7 132 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 NANOGP8Q6NSW7 305 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 WDR82Q6UXN9 313 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 LINC00173Q6ZV60 143 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 WDR86Q86TI4 376 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 OR11L1Q8NGX0 322 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 OR2AE1Q8NHA4 323 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 PIFOQ8TCI5 191 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 APOBEC3DQ96AK3 386 aaPredicted RBP3.71□□□□□ -1.82
CKS1B-204ENST00000471245 FAM3DQ96BQ1 224 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 RBMXL1Q96E39 390 aaKnown RBP3.71□□□□□ -1.82
CKS1B-204ENST00000471245 RNF170Q96K19 258 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 AGMATQ9BSE5 352 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 TMEM100Q9NV29 134 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 MCUBQ9NWR8 336 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 ATPIF1Q9UII2 106 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 ENPP5Q9UJA9 477 aa3.71□□□□□ -1.82
CKS1B-204ENST00000471245 RYR1P21817 5038 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 TRAV38-1A0A0B4J264 116 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 GMNCA6NCL1 334 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 CD300LBA8K4G0 201 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 EFCAB9A8MZ26 197 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 H0Y9J4 135 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 NDUFA2O43678 99 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 SLC16A7O60669 478 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 FADS2O95864 444 aaKnown RBP3.7□□□□□ -1.82
CKS1B-204ENST00000471245 ARG1P05089 322 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 DNAH10OSP0CZ25 163 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 KDELR2P33947 212 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 GGT2P36268 569 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 RPS27P42677 84 aaKnown RBP3.7□□□□□ -1.82
CKS1B-204ENST00000471245 NMUP48645 174 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 RGS6P49758 472 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 UBE2E1P51965 193 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 KRR1Q13601 381 aaKnown RBP3.7□□□□□ -1.82
CKS1B-204ENST00000471245 OR8B8Q15620 311 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 TNXAQ16473 311 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 C2orf83Q53S99 150 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 TEX43Q6ZNM6 134 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 CCDC121Q6ZUS5 278 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 OAFQ86UD1 273 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 ZNF429Q86V71 674 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 VKORC1L1Q8N0U8 176 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 OR6V1Q8N148 313 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 STPG2Q8N412 459 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 FAM216BQ8N7L0 139 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 SLC26A10Q8NG04 563 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 OR6N2Q8NGY6 317 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 OR4S2Q8NH73 311 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 CCL13Q99616 98 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 CDCA4Q9BXL8 241 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 FGF23Q9GZV9 251 aaPredicted RBP3.7□□□□□ -1.82
CKS1B-204ENST00000471245 RERGLQ9H628 205 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 NMNAT1Q9HAN9 279 aaPredicted RBP3.7□□□□□ -1.82
CKS1B-204ENST00000471245 TMBIM4Q9HC24 238 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 KAAG1Q9UBP8 84 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 CELA1Q9UNI1 258 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 SIGLEC7Q9Y286 467 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 NDUFAF1Q9Y375 327 aa3.7□□□□□ -1.82
CKS1B-204ENST00000471245 TCRBV4S1A1TA0A5B7 111 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 PLAC8L1A1L4L8 177 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 NCBP2LA6PVI3 153 aaKnown RBP3.69□□□□□ -1.82
CKS1B-204ENST00000471245 F5H5K5 113 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 NUPL2O15504 423 aaKnown RBP3.69□□□□□ -1.82
CKS1B-204ENST00000471245 SYNGR1O43759 233 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 BRI3O95415 125 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 RAB3DO95716 219 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 IGLV2-23P01705 113 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 GUCA1AP43080 201 aaPredicted RBP3.69□□□□□ -1.82
CKS1B-204ENST00000471245 OMPP47874 163 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 TGM4P49221 684 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 BLCAPP62952 87 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 SELENOWP63302 87 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 OR8G1Q15617 311 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 TMEM183BQ1AE95 376 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms