RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 DEFB112Q30KQ8 113 aa7.82□□□□□ -1.16
CCM2-204ENST00000470837 SSMEM1Q8WWF3 244 aa7.82□□□□□ -1.16
CCM2-204ENST00000470837 AJUBAQ96IF1 538 aa7.82□□□□□ -1.16
CCM2-204ENST00000470837 MFFQ9GZY8 342 aa7.82□□□□□ -1.16
CCM2-204ENST00000470837 SLC25A31Q9H0C2 315 aa7.82□□□□□ -1.16
CCM2-204ENST00000470837 RBKSQ9H477 322 aa7.82□□□□□ -1.16
CCM2-204ENST00000470837 ZNF430Q9H8G1 570 aaPredicted RBP7.82□□□□□ -1.16
CCM2-204ENST00000470837 HEYLQ9NQ87 328 aaPredicted RBP7.82□□□□□ -1.16
CCM2-204ENST00000470837 TMEM160Q9NX00 188 aa7.82□□□□□ -1.16
CCM2-204ENST00000470837 HSPB7Q9UBY9 170 aa7.82□□□□□ -1.16
CCM2-204ENST00000470837 PAIP2BQ9ULR5 123 aaKnown RBP7.82□□□□□ -1.16
CCM2-204ENST00000470837 MOB4Q9Y3A3 225 aa7.82□□□□□ -1.16
CCM2-204ENST00000470837 WNK2Q9Y3S1 2297 aa7.82□□□□□ -1.16
CCM2-204ENST00000470837 ASH1LQ9NR48 2969 aaKnown RBP7.82□□□□□ -1.16
CCM2-204ENST00000470837 CSMD2Q7Z408 3487 aa7.82□□□□□ -1.16
CCM2-204ENST00000470837 PDZD2O15018 2839 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 TRAV3A0A0B4J244 114 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 HMSDA8MTL9 139 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 OR2F2O95006 317 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 SCAF4O95104 1147 aaKnown RBP7.81□□□□□ -1.16
CCM2-204ENST00000470837 NDUFA3O95167 84 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 FSHBP01225 129 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 OPN1MWP04001 364 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 OPN1MW2P0DN77 364 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 OPN1MW3P0DN78 364 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 IAPPP10997 89 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 CNTFRP26992 372 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 SNCAP37840 140 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 RPL27AP46776 148 aaKnown RBP7.81□□□□□ -1.16
CCM2-204ENST00000470837 P2RY1P47900 373 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 TAS2R30P59541 319 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 ERHP84090 104 aaKnown RBP7.81□□□□□ -1.16
CCM2-204ENST00000470837 IL15RAQ13261 267 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 LY6EQ16553 131 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 TMEM65Q6PI78 240 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 CLEC9AQ6UXN8 241 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 IL17RELQ6ZVW7 336 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 C16orf82Q7Z2V1 217 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 STX12Q86Y82 276 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 ABHD5Q8WTS1 349 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 RITA1Q96K30 269 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 RBM14Q96PK6 669 aaKnown RBP7.81□□□□□ -1.16
CCM2-204ENST00000470837 SLC25A33Q9BSK2 321 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 PSENENQ9NZ42 101 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 CDC42EP3Q9UKI2 254 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 TCF19Q9Y242 345 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 WSB1Q9Y6I7 421 aa7.81□□□□□ -1.16
CCM2-204ENST00000470837 TRAV14DV4A0A0A6YYC5 116 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 A0A0D9SG52 128 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 TEX50A0A1B0GTY4 177 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 FGF16O43320 207 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 CA2P00918 260 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 IFNA10P01566 189 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 IL6RP08887 468 aaPredicted RBP7.8□□□□□ -1.16
CCM2-204ENST00000470837 SRD5A1P18405 259 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 COMPP49747 757 aaPredicted RBP7.8□□□□□ -1.16
CCM2-204ENST00000470837 AP2S1P53680 142 aaPredicted RBP7.8□□□□□ -1.16
CCM2-204ENST00000470837 SUB1P53999 127 aaKnown RBP eCLIP7.8□□□□□ -1.16
CCM2-204ENST00000470837 RAB11AP62491 216 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 PRCDQ00LT1 54 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 OR2F1Q13607 317 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 FXYD3Q14802 87 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 AARDQ4LEZ3 155 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 Q5BKY6 102 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 SPINK9Q5DT21 86 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 SPANXN5Q5MJ07 72 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 ACOT7LQ6ZUV0 252 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 HSD17B13Q7Z5P4 300 aaPredicted RBP7.8□□□□□ -1.16
CCM2-204ENST00000470837 TMEM219Q86XT9 240 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 BCL6BQ8N143 479 aaPredicted RBP7.8□□□□□ -1.16
CCM2-204ENST00000470837 OR2C3Q8N628 320 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 Q8N6K4 173 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 GRPEL2Q8TAA5 225 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 RBMXL1Q96E39 390 aaKnown RBP7.8□□□□□ -1.16
CCM2-204ENST00000470837 SMIM8Q96KF7 97 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 OR5AC2Q9NZP5 309 aa7.8□□□□□ -1.16
CCM2-204ENST00000470837 STRAPQ9Y3F4 350 aaKnown RBP7.8□□□□□ -1.16
CCM2-204ENST00000470837 FLNBO75369 2602 aaKnown RBP7.8□□□□□ -1.16
CCM2-204ENST00000470837 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.79□□□□□ -1.16
CCM2-204ENST00000470837 MDFIC2A0A1B0GVS7 189 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 KANTRA0A1W2PQU2 76 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 CYB5BO43169 146 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 TSC22D2O75157 780 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 LY6G6DO95868 133 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 CRYGBP07316 175 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 OR8U8P0C7N1 319 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 LYL1P12980 280 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 RPL12P30050 165 aaKnown RBP7.79□□□□□ -1.16
CCM2-204ENST00000470837 IER3P46695 156 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 NKX2-5P52952 324 aaPredicted RBP7.79□□□□□ -1.16
CCM2-204ENST00000470837 ATP5IP56385 69 aaPredicted RBP7.79□□□□□ -1.16
CCM2-204ENST00000470837 HBG1P69891 147 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 HBG2P69892 147 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 KRTAP1-1Q07627 177 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 BAXQ07812 192 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 PDLIM3Q53GG5 364 aaPredicted RBP7.79□□□□□ -1.16
CCM2-204ENST00000470837 ZNF562Q6V9R5 426 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 Q6YL49 198 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 OR11H4Q8NGC9 324 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 ARPC1AQ92747 370 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms