RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 ZNF550Q7Z398 422 aa1.14□□□□□ -2.23
SSB-209ENST00000470621 OR6V1Q8N148 313 aa1.14□□□□□ -2.23
SSB-209ENST00000470621 C1orf158Q8N1D5 194 aa1.14□□□□□ -2.23
SSB-209ENST00000470621 LRRC25Q8N386 305 aaPredicted RBP1.14□□□□□ -2.23
SSB-209ENST00000470621 CLDN22Q8N7P3 220 aa1.14□□□□□ -2.23
SSB-209ENST00000470621 ZNF676Q8N7Q3 588 aa1.14□□□□□ -2.23
SSB-209ENST00000470621 OR5B17Q8NGF7 314 aa1.14□□□□□ -2.23
SSB-209ENST00000470621 OR1L8Q8NGR8 309 aa1.14□□□□□ -2.23
SSB-209ENST00000470621 KLK6Q92876 244 aa1.14□□□□□ -2.23
SSB-209ENST00000470621 RNASE6Q93091 150 aaKnown RBP1.14□□□□□ -2.23
SSB-209ENST00000470621 Q96M85 177 aa1.14□□□□□ -2.23
SSB-209ENST00000470621 NKX6-2Q9C056 277 aaPredicted RBP1.14□□□□□ -2.23
SSB-209ENST00000470621 PKIGQ9Y2B9 76 aa1.14□□□□□ -2.23
SSB-209ENST00000470621 POLR1DQ9Y2S0 133 aa1.14□□□□□ -2.23
SSB-209ENST00000470621 COQ4Q9Y3A0 265 aa1.14□□□□□ -2.23
SSB-209ENST00000470621 HDGFL3Q9Y3E1 203 aa1.14□□□□□ -2.23
SSB-209ENST00000470621 HECW1Q76N89 1606 aa1.14□□□□□ -2.23
SSB-209ENST00000470621 BAZ2BQ9UIF8 2168 aaKnown RBP1.14□□□□□ -2.23
SSB-209ENST00000470621 WRNQ14191 1432 aaPredicted RBP eCLIP1.14□□□□□ -2.23
SSB-209ENST00000470621 TEX50A0A1B0GTY4 177 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 SMIM23A6NLE4 172 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 M0R381 172 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 STX10O60499 249 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 HAND1O96004 215 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 HBZP02008 142 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 CFL1P23528 166 aaKnown RBP1.13□□□□□ -2.23
SSB-209ENST00000470621 CD24P25063 80 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 CA7P43166 264 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 TMEM33P57088 247 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 OR4D2P58180 307 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 TAS2R30P59541 319 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 RAB5BP61020 215 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 DAD1P61803 113 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 ARF6P62330 175 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 HLA-DRB3P79483 266 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 TMEM155Q4W5P6 130 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 TMEM42Q69YG0 159 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 SPOPLQ6IQ16 392 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 SCGB1D4Q6XE38 83 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 LYG2Q86SG7 212 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 C1orf174Q8IYL3 243 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 DAND5Q8N907 189 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 OR10X1Q8NGY0 326 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 CLDND2Q8NHS1 167 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 SLC35B4Q969S0 331 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 HOPXQ9BPY8 73 aaPredicted RBP1.13□□□□□ -2.23
SSB-209ENST00000470621 CYSTM1Q9H1C7 97 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 CMTM6Q9NX76 183 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 ANGPT4Q9Y264 503 aa1.13□□□□□ -2.23
SSB-209ENST00000470621 GRIN2BQ13224 1484 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 MTUS2Q5JR59 1369 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 TNNC2P02585 160 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 CST2P09228 141 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 SULT1A1P50225 295 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 SNAP25P60880 206 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 POLR2GP62487 172 aaKnown RBP eCLIP1.12□□□□□ -2.23
SSB-209ENST00000470621 TNFAIP6P98066 277 aaPredicted RBP1.12□□□□□ -2.23
SSB-209ENST00000470621 FABP5Q01469 135 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 PRB3Q04118 309 aaPredicted RBP1.12□□□□□ -2.23
SSB-209ENST00000470621 EMX1Q04741 257 aaPredicted RBP1.12□□□□□ -2.23
SSB-209ENST00000470621 HIST3H3Q16695 136 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 ACOT6Q3I5F7 207 aaPredicted RBP1.12□□□□□ -2.23
SSB-209ENST00000470621 HACD4Q5VWC8 232 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 DEFB125Q8N687 156 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 PXT1Q8NFP0 134 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 OR2D3Q8NGH3 330 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 SMCR5Q8TEV8 140 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 Q8WTZ3 238 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 ANP32BQ92688 251 aaKnown RBP1.12□□□□□ -2.23
SSB-209ENST00000470621 IMP4Q96G21 291 aaKnown RBP1.12□□□□□ -2.23
SSB-209ENST00000470621 PPP1R2P1Q96PQ5 205 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 OR7D2Q96RA2 312 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 VCX3BQ9H321 246 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 IDI2-AS1Q9NZ38 188 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 VPS29Q9UBQ0 182 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 ANAPC10Q9UM13 185 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 PRELID1Q9Y255 219 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 PRELID3BQ9Y3B1 194 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 PCYT1BQ9Y5K3 369 aaPredicted RBP1.12□□□□□ -2.23
SSB-209ENST00000470621 CPAMD8Q8IZJ3 1885 aa1.12□□□□□ -2.23
SSB-209ENST00000470621 EIF3AQ14152 1382 aaKnown RBP1.11□□□□□ -2.23
SSB-209ENST00000470621 FAM236DA0A1B0GTK5 79 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 EEF1E1-BLOC1S5C9J1V9 151 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 BHLHE40O14503 412 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 COPEO14579 308 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 GSTZ1O43708 216 aaPredicted RBP1.11□□□□□ -2.23
SSB-209ENST00000470621 CIAO1O76071 339 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 KRT75O95678 551 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 FABP1P07148 127 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 OR5G3P0C626 314 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 FAM236CP0DP71 79 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 FGF6P10767 208 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 MYL12AP19105 171 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 CCR2P41597 374 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 OMPP47874 163 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 MARCKSL1P49006 195 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 SPCS3P61009 180 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 BTN3A2P78410 334 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 PMAIP1Q13794 54 aa1.11□□□□□ -2.23
SSB-209ENST00000470621 GUK1Q16774 197 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms