RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 ZNF788Q6ZQV5 615 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 SSX7Q7RTT5 188 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 C16orf82Q7Z2V1 217 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 DEFB108BQ8NET1 73 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 OR5B3Q8NH48 314 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 OR4A5Q8NH83 315 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 DDB2Q92466 427 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 GAFA1Q96PS6 74 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 CCL13Q99616 98 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 HINT2Q9BX68 163 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 SAP30LQ9HAJ7 183 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 DYNLRB1Q9NP97 96 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 GAR1Q9NY12 217 aaKnown RBP6.58□□□□□ -1.36
SMC4-212ENST00000470240 SLC25A10Q9UBX3 287 aaPredicted RBP6.58□□□□□ -1.36
SMC4-212ENST00000470240 PXMP4Q9Y6I8 212 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 TANC2Q9HCD6 1990 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 GTF3C1Q12789 2109 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 SPTBN5Q9NRC6 3674 aaKnown RBP6.57□□□□□ -1.36
SMC4-212ENST00000470240 MDFIC2A0A1B0GVS7 189 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 A0A1W2PN81 502 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 J3QR06 171 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 HMGB3O15347 200 aaKnown RBP6.57□□□□□ -1.36
SMC4-212ENST00000470240 TNRC18O15417 2968 aaPredicted RBP6.57□□□□□ -1.36
SMC4-212ENST00000470240 NDUFB3O43676 98 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 CLN5O75503 358 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 CXCL1P09341 107 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 OR4A8P0C604 315 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 MDKP21741 143 aaPredicted RBP6.57□□□□□ -1.36
SMC4-212ENST00000470240 CHRNA7P36544 502 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 NBL1P41271 181 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 SUB1P53999 127 aaKnown RBP eCLIP6.57□□□□□ -1.36
SMC4-212ENST00000470240 FAM3BP58499 235 aaPredicted RBP6.57□□□□□ -1.36
SMC4-212ENST00000470240 ERVFRD-1P60508 538 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 RPS16P62249 146 aaKnown RBP6.57□□□□□ -1.36
SMC4-212ENST00000470240 RPL23P62829 140 aaKnown RBP6.57□□□□□ -1.36
SMC4-212ENST00000470240 ERHP84090 104 aaKnown RBP6.57□□□□□ -1.36
SMC4-212ENST00000470240 TLE1Q04724 770 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 FAM27E3Q08E93 113 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 CT45A1Q5HYN5 189 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 FAM53AQ6NSI3 398 aaPredicted RBP6.57□□□□□ -1.36
SMC4-212ENST00000470240 ZNF343Q6P1L6 599 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 SLC25A48Q6ZT89 311 aaKnown RBP6.57□□□□□ -1.36
SMC4-212ENST00000470240 CT45A3Q8NHU0 189 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 OSR1Q8TAX0 266 aaPredicted RBP6.57□□□□□ -1.36
SMC4-212ENST00000470240 SLC35E1Q96K37 410 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 ZNF714Q96N38 554 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 RNF2Q99496 336 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 C19orf24Q9BVV8 132 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 GGTLC1Q9BX51 225 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 MS4A5Q9H3V2 200 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 SRD5A3Q9H8P0 318 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 LINC00574Q9H8X3 128 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 NIT2Q9NQR4 276 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 TMEM14BQ9NUH8 114 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 DOK5Q9P104 306 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 RPUSD1Q9UJJ7 312 aaKnown RBP6.57□□□□□ -1.36
SMC4-212ENST00000470240 PITPNC1Q9UKF7 332 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 ARL2-SNX15V9GYD0 113 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 NCOR1O75376 2440 aa6.57□□□□□ -1.36
SMC4-212ENST00000470240 TRIOO75962 3097 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 FAM186AA6NE01 2351 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 PPIAL4EA0A075B759 164 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 A0A1W2PPE3 182 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 PPIAL4DF5H284 164 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 UPK2O00526 184 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 RRHO14718 337 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 SLC31A2O15432 143 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 IGHV3-7P01780 117 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 TRGC2P03986 189 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 IL6RP08887 468 aaPredicted RBP6.56□□□□□ -1.36
SMC4-212ENST00000470240 PPIAL4FP0DN26 164 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 HOXA5P20719 270 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 RPL29P47914 159 aaKnown RBP6.56□□□□□ -1.36
SMC4-212ENST00000470240 RPL31P62899 125 aaKnown RBP6.56□□□□□ -1.36
SMC4-212ENST00000470240 CCL8P80075 99 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 HOXA4Q00056 320 aaPredicted RBP6.56□□□□□ -1.36
SMC4-212ENST00000470240 PRCDQ00LT1 54 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 TCF15Q12870 199 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 SSX2Q16385 188 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 VKORC1L1Q8N0U8 176 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 RPRMLQ8N4K4 120 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 FAM216BQ8N7L0 139 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 ZNF383Q8NA42 475 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 ZNF439Q8NDP4 499 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 OR10X1Q8NGY0 326 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 OR2T10Q8NGZ9 312 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 LEAP2Q969E1 77 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 TMEM186Q96B77 213 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 HARBI1Q96MB7 349 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 IMMP2LQ96T52 175 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 PFDN5Q99471 154 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 SSX3Q99909 188 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 COMMD5Q9GZQ3 224 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 TMEM167BQ9NRX6 74 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 BET1LQ9NYM9 111 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 PPIAL4AQ9Y536 164 aa6.56□□□□□ -1.36
SMC4-212ENST00000470240 HCFC1P51610 2035 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 A0A0G2JNJ9 132 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 HIST1H2BKO60814 126 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 CA2P00918 260 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms