RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 CDK10Q15131 360 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 SNCBQ16143 134 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.65□□□□□ -2.15
BRCA2-202ENST00000470094 HACD4Q5VWC8 232 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 TMPPEQ6ZT21 453 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 S100A7AQ86SG5 101 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 OOSP2Q86WS3 158 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 OR8B12Q8NGG6 310 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 OR52L1Q8NGH7 329 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 OR2T4Q8NH00 348 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 CLDND2Q8NHS1 167 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 SMCR5Q8TEV8 140 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 CNBD2Q96M20 576 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 C20orf166-AS1Q96NR2 134 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 PPP1R2P1Q96PQ5 205 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 TSPAN32Q96QS1 320 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 CMSS1Q9BQ75 279 aaKnown RBP1.65□□□□□ -2.15
BRCA2-202ENST00000470094 SELENOSQ9BQE4 189 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 PSORS1C2Q9UIG4 136 aa1.65□□□□□ -2.15
BRCA2-202ENST00000470094 PLXNB1O43157 2135 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 PEG3Q9GZU2 1588 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 DENND4BO75064 1496 aaPredicted RBP1.64□□□□□ -2.15
BRCA2-202ENST00000470094 NEO1Q92859 1461 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 ZSWIM8A7E2V4 1837 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 ABCC12Q96J65 1359 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 TRAV26-2A0A0B4J265 109 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 A0A0J9YX75 114 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 TMEM235A6NFC5 223 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 OR4C46A6NHA9 309 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 A8MUN3 132 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 ODF3BA8MYP8 253 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 CIAO1O76071 339 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 FABP1P07148 127 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 CD24P25063 80 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 BLVRBP30043 206 aaPredicted RBP1.64□□□□□ -2.15
BRCA2-202ENST00000470094 RPL5P46777 297 aaKnown RBP1.64□□□□□ -2.15
BRCA2-202ENST00000470094 GABRA4P48169 554 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 POLR2GP62487 172 aaKnown RBP eCLIP1.64□□□□□ -2.15
BRCA2-202ENST00000470094 RPL19P84098 196 aaKnown RBP1.64□□□□□ -2.15
BRCA2-202ENST00000470094 GNA12Q03113 381 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 TNFRSF9Q07011 255 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 C9orf64Q5T6V5 341 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 C2orf91Q6ZV80 131 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 OR51A2Q8NGJ7 313 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 OR13C8Q8NGS7 320 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 CEP19Q96LK0 163 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 NMNAT3Q96T66 252 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 CGREF1Q99674 301 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 ZNF471Q9BX82 626 aaPredicted RBP1.64□□□□□ -2.15
BRCA2-202ENST00000470094 BOLA2Q9H3K6 86 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 CENPHQ9H3R5 247 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 FAM96AQ9H5X1 160 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 PRTFDC1Q9NRG1 225 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 SMPXQ9UHP9 88 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 TIMM22Q9Y584 194 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 V9GYQ6 96 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 NCOA3Q9Y6Q9 1424 aa1.64□□□□□ -2.15
BRCA2-202ENST00000470094 TRPM3Q9HCF6 1732 aaPredicted RBP1.63□□□□□ -2.15
BRCA2-202ENST00000470094 RTL1A6NKG5 1358 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 ROBO3Q96MS0 1386 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 MYO16Q9Y6X6 1858 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 FAM236DA0A1B0GTK5 79 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 A0A1W2PQD3 144 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 hADV38S2A0JD32 116 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 KNCNA6PVL3 124 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 H3BQV1 296 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 J3QRE1 110 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 PGRMC1O00264 195 aaKnown RBP1.63□□□□□ -2.15
BRCA2-202ENST00000470094 PLA2G10O15496 165 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 PDE6DO43924 150 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 NPYP01303 97 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 HLA-DRB1P01911 266 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 FAM236CP0DP71 79 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 G0S2P27469 103 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 XCL1P47992 114 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 FXYD7P58549 80 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 TAS2R20P59543 309 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 ARPC4P59998 168 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 SMARCD3Q6STE5 483 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 MCFD2Q8NI22 146 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 NEK7Q8TDX7 302 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 PHB2Q99623 299 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 KIFC1Q9BW19 673 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 C20orf27Q9GZN8 174 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 CMTM6Q9NX76 183 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 PAQR5Q9NXK6 330 aaPredicted RBP1.63□□□□□ -2.15
BRCA2-202ENST00000470094 RSL24D1Q9UHA3 163 aaKnown RBP1.63□□□□□ -2.15
BRCA2-202ENST00000470094 CCL26Q9Y258 94 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 PKIGQ9Y2B9 76 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 FAM215AQ9Y5M1 114 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 ATG2BQ96BY7 2078 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 SYNMO15061 1565 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 SHANK3Q9BYB0 1731 aa1.63□□□□□ -2.15
BRCA2-202ENST00000470094 ZCCHC11Q5TAX3 1644 aaKnown RBP1.62□□□□□ -2.15
BRCA2-202ENST00000470094 SIPA1L1O43166 1804 aa1.62□□□□□ -2.15
BRCA2-202ENST00000470094 KIF1BO60333 1816 aa1.62□□□□□ -2.15
BRCA2-202ENST00000470094 C11orf86A6NJI1 115 aa1.62□□□□□ -2.15
BRCA2-202ENST00000470094 GNRH2O43555 120 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms