RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-210	ENST00000470086	CA11	O75493	328 aa		5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	CRTAP	O75718	401 aa	Predicted RBP	5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	MIF	P14174	115 aa		5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	RAB32	Q13637	225 aa		5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	KLK9	Q2XQG4	91 aa		5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	AWAT2	Q6E213	333 aa		5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	TRPT1	Q86TN4	253 aa	Known RBP	5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	PTX4	Q96A99	478 aa		5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	EEF1AKMT3	Q96AZ1	226 aa		5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	CPNE2	Q96FN4	548 aa	Predicted RBP	5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	YTHDF1	Q9BYJ9	559 aa	Known RBP	5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	RIBC2	Q9H4K1	309 aa		5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	TMEM138	Q9NPI0	162 aa		5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	SLC2A9	Q9NRM0	540 aa		5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	RDH8	Q9NYR8	311 aa		5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	KLK9	Q9UKQ9	250 aa		5.76	□□□□□ -1.49
LSM2-210	ENST00000470086	IGHV3-21	A0A0B4J1V1	117 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086		A0A1W2PPK0	400 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	OR2T8	A6NH00	312 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	DYNC1I1	O14576	645 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	TGOLN2	O43493	480 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	IFNA21	P01568	189 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	IFNA17	P01571	189 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	GAL	P22466	123 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	HTR2C	P28335	458 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	DEFB131A	P59861	70 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	KRTAP10-1	P60331	282 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	RPS11	P62280	158 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	UNC119	Q13432	240 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	OR2B11	Q5JQS5	317 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	FAM90A2P	Q658T7	463 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	TMEM88	Q6PEY1	159 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	ASB9	Q96DX5	294 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	C17orf77	Q96MU5	243 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	FYTTD1	Q96QD9	318 aa	Known RBP	5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	SRSF8	Q9BRL6	282 aa	Known RBP	5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	PRRG3	Q9BZD7	231 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	DAZ1	Q9NQZ3	744 aa	Known RBP	5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	PPP1R14D	Q9NXH3	145 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	AK3	Q9UIJ7	227 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	EXOG	Q9Y2C4	368 aa	Known RBP	5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	UFC1	Q9Y3C8	167 aa		5.75	□□□□□ -1.49
LSM2-210	ENST00000470086	TRBV5-5	A0A0J9YX44	114 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	SAC3D1	A6NKF1	404 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	KNCN	A6PVL3	124 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	CHEK1	O14757	476 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	ZNF780A	O75290	641 aa	Predicted RBP	5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	APOH	P02749	345 aa	Predicted RBP	5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	CRYGC	P07315	174 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	ZNF735	P0CB33	412 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	PSMB6	P28072	239 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	DUT	P33316	252 aa	Known RBP	5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	CDK10	Q15131	360 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	RNF212	Q495C1	297 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	OR2G6	Q5TZ20	316 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	JAGN1	Q8N5M9	183 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	TEX45	Q8NA69	505 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	OR6M1	Q8NGM8	313 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	FRZB	Q92765	325 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	CMTM3	Q96MX0	182 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	S100A13	Q99584	98 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	ABRACL	Q9P1F3	81 aa		5.74	□□□□□ -1.49
LSM2-210	ENST00000470086	TRBV5-7	A0A0A0MS05	114 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	RAB27B	O00194	218 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	CTDSP2	O14595	271 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	GLA	P06280	429 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	CAPG	P40121	348 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	RPL27A	P46776	148 aa	Known RBP	5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	BRWD1-AS2	P59051	145 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	RPL30	P62888	115 aa	Known RBP	5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	RPL11	P62913	178 aa	Known RBP	5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	PPP3R1	P63098	170 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	DLK1	P80370	383 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	IRF3	Q14653	427 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	VMA21	Q3ZAQ7	101 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	IGSF11	Q5DX21	431 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	CST9LP1	Q5W188	147 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	SYS1	Q8N2H4	156 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	ACBD7	Q8N6N7	88 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	ZFP41	Q8N8Y5	198 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	DNAJC9	Q8WXX5	260 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	RAB24	Q969Q5	203 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	SPIN2A	Q99865	258 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	SPIN2B	Q9BPZ2	258 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	C20orf24	Q9BUV8	137 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	GABARAPL3	Q9BY60	117 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	GABARAPL1	Q9H0R8	117 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	CHMP1A	Q9HD42	196 aa	Predicted RBP	5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	PLA2G2D	Q9UNK4	145 aa		5.73	□□□□□ -1.49
LSM2-210	ENST00000470086	IGHV7-4-1	A0A0J9YVY3	117 aa		5.72	□□□□□ -1.49
LSM2-210	ENST00000470086	IGLC7	A0M8Q6	106 aa		5.72	□□□□□ -1.49
LSM2-210	ENST00000470086	FOXI3	A8MTJ6	420 aa	Predicted RBP	5.72	□□□□□ -1.49
LSM2-210	ENST00000470086	KRTAP9-7	A8MTY7	169 aa		5.72	□□□□□ -1.49
LSM2-210	ENST00000470086	SOCS1	O15524	211 aa		5.72	□□□□□ -1.49
LSM2-210	ENST00000470086	S100A6	P06703	90 aa		5.72	□□□□□ -1.49
LSM2-210	ENST00000470086	LIMS3	P0CW19	117 aa		5.72	□□□□□ -1.49
LSM2-210	ENST00000470086	LIMS4	P0CW20	117 aa		5.72	□□□□□ -1.49
LSM2-210	ENST00000470086	HTN3	P15516	51 aa		5.72	□□□□□ -1.49
LSM2-210	ENST00000470086	MAL	P21145	153 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms