RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 CACNA1DQ01668 2161 aa11.57□□□□□ -0.56
GPC1-208ENST00000469694 A0A1W2PN81 502 aa11.57□□□□□ -0.56
GPC1-208ENST00000469694 KITLGP21583 273 aa11.57□□□□□ -0.56
GPC1-208ENST00000469694 ZNF738Q8NE65 137 aa11.57□□□□□ -0.56
GPC1-208ENST00000469694 PLSCR4Q9NRQ2 329 aa11.57□□□□□ -0.56
GPC1-208ENST00000469694 PROCRQ9UNN8 238 aa11.57□□□□□ -0.56
GPC1-208ENST00000469694 MDFIC2A0A1B0GVS7 189 aa11.56□□□□□ -0.56
GPC1-208ENST00000469694 CGAP01215 116 aa11.56□□□□□ -0.56
GPC1-208ENST00000469694 HOXC12P31275 282 aa11.56□□□□□ -0.56
GPC1-208ENST00000469694 MPV17P39210 176 aa11.56□□□□□ -0.56
GPC1-208ENST00000469694 Q6ZVH6 145 aa11.56□□□□□ -0.56
GPC1-208ENST00000469694 ZGRF1Q86YA3 2104 aa11.56□□□□□ -0.56
GPC1-208ENST00000469694 ZNF586Q9NXT0 402 aa11.56□□□□□ -0.56
GPC1-208ENST00000469694 F6UZH7 168 aa11.56□□□□□ -0.56
GPC1-208ENST00000469694 SH2D1BO14796 132 aa11.56□□□□□ -0.56
GPC1-208ENST00000469694 MORN2Q502X0 79 aa11.56□□□□□ -0.56
GPC1-208ENST00000469694 PRR30Q53SZ7 412 aaPredicted RBP11.56□□□□□ -0.56
GPC1-208ENST00000469694 OR2D3Q8NGH3 330 aa11.56□□□□□ -0.56
GPC1-208ENST00000469694 MRGPRDQ8TDS7 321 aa11.56□□□□□ -0.56
GPC1-208ENST00000469694 FAM103A1Q9BTL3 118 aaKnown RBP11.56□□□□□ -0.56
GPC1-208ENST00000469694 TUBG2Q9NRH3 451 aa11.56□□□□□ -0.56
GPC1-208ENST00000469694 ERRFI1Q9UJM3 462 aaPredicted RBP11.56□□□□□ -0.56
GPC1-208ENST00000469694 NBASA2RRP1 2371 aa11.56□□□□□ -0.56
GPC1-208ENST00000469694 ATP5G3P48201 142 aa11.55□□□□□ -0.56
GPC1-208ENST00000469694 PSG7Q13046 419 aa11.55□□□□□ -0.56
GPC1-208ENST00000469694 WDR86Q86TI4 376 aa11.55□□□□□ -0.56
GPC1-208ENST00000469694 ICE1Q9Y2F5 2266 aa11.55□□□□□ -0.56
GPC1-208ENST00000469694 MBD3L4A6NDZ8 208 aaPredicted RBP11.55□□□□□ -0.56
GPC1-208ENST00000469694 MBD3L3A6NE82 208 aaPredicted RBP11.55□□□□□ -0.56
GPC1-208ENST00000469694 MBD3L5A6NJ08 208 aaPredicted RBP11.55□□□□□ -0.56
GPC1-208ENST00000469694 A8MXE2 369 aa11.55□□□□□ -0.56
GPC1-208ENST00000469694 FAM87AP0C7U9 286 aa11.55□□□□□ -0.56
GPC1-208ENST00000469694 CECR9P0C854 216 aa11.55□□□□□ -0.56
GPC1-208ENST00000469694 ZNF90Q03938 601 aa11.55□□□□□ -0.56
GPC1-208ENST00000469694 RNF151Q2KHN1 245 aa11.55□□□□□ -0.56
GPC1-208ENST00000469694 ZNF474Q6S9Z5 364 aaPredicted RBP11.55□□□□□ -0.56
GPC1-208ENST00000469694 UNQ5815/PRO19632Q6UWF5 114 aa11.55□□□□□ -0.56
GPC1-208ENST00000469694 MBD3L2Q8NHZ7 208 aaPredicted RBP11.55□□□□□ -0.56
GPC1-208ENST00000469694 RDH5Q92781 318 aa11.55□□□□□ -0.56
GPC1-208ENST00000469694 TMEM147Q9BVK8 224 aa11.55□□□□□ -0.56
GPC1-208ENST00000469694 TRBV20OR9-2A0A075B6H5 130 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 TRAV9-1A0A075B6T8 112 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 CLDN1O95832 211 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 PPBPP02775 128 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 DEFA4P12838 97 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 TIMP3P35625 211 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 ZNF585BQ52M93 769 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 INO80CQ6PI98 192 aaPredicted RBP11.54□□□□□ -0.56
GPC1-208ENST00000469694 C20orf204Q6ZNR8 217 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 OR5A2Q8NGI9 324 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 OR10G8Q8NGN5 311 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 CHODLQ9H9P2 273 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 KCNIP2Q9NS61 270 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 IGHV2OR16-5A0A0B4J2B6 119 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 IGHV2-70DA0A0C4DH43 119 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 IGKV3-15P01624 115 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 IGLV2-14P01704 120 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 FABP6P51161 128 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 MRPL49Q13405 166 aaKnown RBP11.54□□□□□ -0.56
GPC1-208ENST00000469694 Q8NA96 180 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 KLF14Q8TD94 323 aaPredicted RBP11.54□□□□□ -0.56
GPC1-208ENST00000469694 NRN1Q9NPD7 142 aa11.54□□□□□ -0.56
GPC1-208ENST00000469694 TBL2Q9Y4P3 447 aaKnown RBP11.54□□□□□ -0.56
GPC1-208ENST00000469694 FAM90A26D6RGX4 464 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 TRAPPC2LH3BP13 241 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 DEGS1O15121 323 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 UBE2G2P60604 165 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 TBR1Q16650 682 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 OR1L1Q8NH94 360 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 NPCDR1Q9BY65 106 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 HEATR1Q9H583 2144 aaKnown RBP11.53□□□□□ -0.56
GPC1-208ENST00000469694 FCN1O00602 326 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 ZNF253O75346 499 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 BMP5P22003 454 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 CDC34P49427 236 aaPredicted RBP11.53□□□□□ -0.56
GPC1-208ENST00000469694 HINT1P49773 126 aaPredicted RBP11.53□□□□□ -0.56
GPC1-208ENST00000469694 FGF12P61328 243 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 TFF3Q07654 80 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 KRTCAP3Q53RY4 240 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 C22orf34Q6ZV56 151 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 BET1LQ9NYM9 111 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 IL36BQ9NZH7 164 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 MRPS16Q9Y3D3 137 aaKnown RBP11.53□□□□□ -0.56
GPC1-208ENST00000469694 ROS1P08922 2347 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 LRP5LA4QPB2 252 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 GNG3P63215 75 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 FBLN7Q53RD9 439 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 BHLHA15Q7RTS1 189 aaPredicted RBP11.53□□□□□ -0.56
GPC1-208ENST00000469694 KLHDC1Q8N7A1 406 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 OCC1Q8TAD7 63 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 IL1F10Q8WWZ1 152 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 GNB4Q9HAV0 340 aa11.53□□□□□ -0.56
GPC1-208ENST00000469694 TRAV34A0A0B4J273 112 aa11.52□□□□□ -0.57
GPC1-208ENST00000469694 IGHV1-18A0A0C4DH31 117 aa11.52□□□□□ -0.57
GPC1-208ENST00000469694 PMS2P5A8MQ11 134 aa11.52□□□□□ -0.57
GPC1-208ENST00000469694 CDIPTO14735 213 aa11.52□□□□□ -0.57
GPC1-208ENST00000469694 GRPP07492 148 aa11.52□□□□□ -0.57
GPC1-208ENST00000469694 TSPOP30536 169 aa11.52□□□□□ -0.57
GPC1-208ENST00000469694 ZNF83P51522 516 aa11.52□□□□□ -0.57
GPC1-208ENST00000469694 C1orf185Q5T7R7 199 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms