RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 TATDN3Q17R31 274 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 RPEL1Q2QD12 228 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 C15orf32Q32M92 178 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 CMTM1Q8IZ96 169 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 COMMD9Q9P000 198 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 SMAD5-AS1Q9Y6J3 95 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 CGB1A6NKQ9 187 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 FAM25AB3EWG3 89 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 FAM25CB3EWG5 89 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 FAM25GB3EWG6 89 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 BMPR1BO00238 502 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 GPR31O00270 319 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 RLN1P04808 185 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 FGF2P09038 288 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 OR2B8PP59922 312 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 TSPAN5P62079 268 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 KLK9Q2XQG4 91 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 C19orf35Q6ZS72 473 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 GPR141Q7Z602 305 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 DMBX1Q8NFW5 382 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 DGCR14Q96DF8 476 aaKnown RBP13.05□□□□□ -0.32
SSBP1-207ENST00000468267 FANCD2OSQ96PS1 177 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 RSRP1Q9BUV0 290 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 TMEM140Q9NV12 185 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 FBXL7Q9UJT9 491 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 KLK9Q9UKQ9 250 aa13.05□□□□□ -0.32
SSBP1-207ENST00000468267 DHFRP00374 187 aa13.04□□□□□ -0.32
SSBP1-207ENST00000468267 CTRB1P17538 263 aa13.04□□□□□ -0.32
SSBP1-207ENST00000468267 FAM209BQ5JX69 171 aa13.04□□□□□ -0.32
SSBP1-207ENST00000468267 CTRB2Q6GPI1 263 aa13.04□□□□□ -0.32
SSBP1-207ENST00000468267 LPCAT3Q6P1A2 487 aa13.04□□□□□ -0.32
SSBP1-207ENST00000468267 HAPLN4Q86UW8 402 aa13.04□□□□□ -0.32
SSBP1-207ENST00000468267 TPPPO94811 219 aa13.03□□□□□ -0.32
SSBP1-207ENST00000468267 CSN3P07498 182 aa13.03□□□□□ -0.32
SSBP1-207ENST00000468267 RPA2P15927 270 aa13.03□□□□□ -0.32
SSBP1-207ENST00000468267 LPAR6P43657 344 aa13.03□□□□□ -0.32
SSBP1-207ENST00000468267 ERVK-16P61578 105 aa13.03□□□□□ -0.32
SSBP1-207ENST00000468267 ZNF585BQ52M93 769 aa13.03□□□□□ -0.32
SSBP1-207ENST00000468267 CADM3Q8N126 398 aa13.03□□□□□ -0.32
SSBP1-207ENST00000468267 FCAMRQ8WWV6 532 aa13.03□□□□□ -0.32
SSBP1-207ENST00000468267 SRSF8Q9BRL6 282 aaKnown RBP13.03□□□□□ -0.32
SSBP1-207ENST00000468267 COMMD5Q9GZQ3 224 aa13.03□□□□□ -0.32
SSBP1-207ENST00000468267 SIGLEC8Q9NYZ4 499 aa13.03□□□□□ -0.32
SSBP1-207ENST00000468267 DMRT1Q9Y5R6 373 aa13.03□□□□□ -0.32
SSBP1-207ENST00000468267 IGLC7A0M8Q6 106 aa13.02□□□□□ -0.33
SSBP1-207ENST00000468267 MARCH11A6NNE9 402 aa13.02□□□□□ -0.33
SSBP1-207ENST00000468267 NDUFB8O95169 186 aa13.02□□□□□ -0.33
SSBP1-207ENST00000468267 REG1AP05451 166 aa13.02□□□□□ -0.33
SSBP1-207ENST00000468267 HIST1H1BP16401 226 aaKnown RBP13.02□□□□□ -0.33
SSBP1-207ENST00000468267 UCP3P55916 312 aa13.02□□□□□ -0.33
SSBP1-207ENST00000468267 PHLDA2Q53GA4 152 aa13.02□□□□□ -0.33
SSBP1-207ENST00000468267 ASCL2Q99929 193 aa13.02□□□□□ -0.33
SSBP1-207ENST00000468267 EXTL2Q9UBQ6 330 aa13.02□□□□□ -0.33
SSBP1-207ENST00000468267 KLK11Q9UBX7 282 aa13.02□□□□□ -0.33
SSBP1-207ENST00000468267 DNAH7Q8WXX0 4024 aa13.01□□□□□ -0.33
SSBP1-207ENST00000468267 IGLV11-55A0A075B6I3 123 aa13.01□□□□□ -0.33
SSBP1-207ENST00000468267 PPP5D1E7EU14 171 aa13.01□□□□□ -0.33
SSBP1-207ENST00000468267 M0QYG6 137 aa13.01□□□□□ -0.33
SSBP1-207ENST00000468267 KRASP01116 189 aa13.01□□□□□ -0.33
SSBP1-207ENST00000468267 DEFA4P12838 97 aa13.01□□□□□ -0.33
SSBP1-207ENST00000468267 S100GP29377 79 aa13.01□□□□□ -0.33
SSBP1-207ENST00000468267 OR52I2Q8NH67 350 aa13.01□□□□□ -0.33
SSBP1-207ENST00000468267 ABHD1Q96SE0 405 aa13.01□□□□□ -0.33
SSBP1-207ENST00000468267 QTRT1Q9BXR0 403 aaKnown RBP13.01□□□□□ -0.33
SSBP1-207ENST00000468267 FAM212BQ9NTI7 297 aaPredicted RBP13.01□□□□□ -0.33
SSBP1-207ENST00000468267 PEMTQ9UBM1 199 aa13.01□□□□□ -0.33
SSBP1-207ENST00000468267 NBEAL2Q6ZNJ1 2754 aa13.01□□□□□ -0.33
SSBP1-207ENST00000468267 TEX50A0A1B0GTY4 177 aa13□□□□□ -0.33
SSBP1-207ENST00000468267 H0Y980 276 aa13□□□□□ -0.33
SSBP1-207ENST00000468267 GGCTO75223 188 aaKnown RBP13□□□□□ -0.33
SSBP1-207ENST00000468267 TRAPPC2P0DI81 140 aa13□□□□□ -0.33
SSBP1-207ENST00000468267 TRAPPC2BP0DI82 140 aa13□□□□□ -0.33
SSBP1-207ENST00000468267 G6PCP35575 357 aa13□□□□□ -0.33
SSBP1-207ENST00000468267 MECP2P51608 486 aaKnown RBP13□□□□□ -0.33
SSBP1-207ENST00000468267 SPCS2Q15005 226 aa13□□□□□ -0.33
SSBP1-207ENST00000468267 RNASE12Q5GAN4 147 aaKnown RBP13□□□□□ -0.33
SSBP1-207ENST00000468267 SLC38A6Q8IZM9 456 aa13□□□□□ -0.33
SSBP1-207ENST00000468267 Q8N1Y9 231 aa13□□□□□ -0.33
SSBP1-207ENST00000468267 OR10W1Q8NGF6 305 aa13□□□□□ -0.33
SSBP1-207ENST00000468267 OR1L8Q8NGR8 309 aa13□□□□□ -0.33
SSBP1-207ENST00000468267 C15orf40Q8WUR7 153 aa13□□□□□ -0.33
SSBP1-207ENST00000468267 CCDC140Q96MF4 163 aa13□□□□□ -0.33
SSBP1-207ENST00000468267 MIXL1Q9H2W2 232 aa13□□□□□ -0.33
SSBP1-207ENST00000468267 MTFP1Q9UDX5 166 aa13□□□□□ -0.33
SSBP1-207ENST00000468267 U3KQK5 164 aa13□□□□□ -0.33
SSBP1-207ENST00000468267 IGHV3-23P01764 117 aa12.99□□□□□ -0.33
SSBP1-207ENST00000468267 IFNA6P05013 189 aa12.99□□□□□ -0.33
SSBP1-207ENST00000468267 THOC7Q6I9Y2 204 aaKnown RBP12.99□□□□□ -0.33
SSBP1-207ENST00000468267 CLEC19AQ6UXS0 136 aa12.99□□□□□ -0.33
SSBP1-207ENST00000468267 TBC1D26Q86UD7 250 aa12.99□□□□□ -0.33
SSBP1-207ENST00000468267 CLVS1Q8IUQ0 354 aaPredicted RBP12.99□□□□□ -0.33
SSBP1-207ENST00000468267 EEF1AKMT3Q96AZ1 226 aa12.99□□□□□ -0.33
SSBP1-207ENST00000468267 WWC2-AS2Q96NR7 200 aa12.99□□□□□ -0.33
SSBP1-207ENST00000468267 NDUFA4L2Q9NRX3 87 aa12.99□□□□□ -0.33
SSBP1-207ENST00000468267 S4R3C0 116 aa12.99□□□□□ -0.33
SSBP1-207ENST00000468267 TRBV7-1A0A0A6YYK4 115 aa12.98□□□□□ -0.33
SSBP1-207ENST00000468267 CTDSP2O14595 271 aa12.98□□□□□ -0.33
SSBP1-207ENST00000468267 SNAPC5O75971 98 aa12.98□□□□□ -0.33
SSBP1-207ENST00000468267 OR2C1O95371 312 aa12.98□□□□□ -0.33
SSBP1-207ENST00000468267 HLA-AP01891 365 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms