RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 RTBDNQ9BSG5 229 aaPredicted RBP15.56■□□□□ 0.08
NPHP4-206ENST00000468253 TMEM140Q9NV12 185 aa15.56■□□□□ 0.08
NPHP4-206ENST00000468253 H0Y980 276 aa15.55■□□□□ 0.08
NPHP4-206ENST00000468253 KRASP01116 189 aa15.55■□□□□ 0.08
NPHP4-206ENST00000468253 PI3P19957 117 aa15.55■□□□□ 0.08
NPHP4-206ENST00000468253 FAAP20Q6NZ36 180 aa15.55■□□□□ 0.08
NPHP4-206ENST00000468253 MRPL41Q8IXM3 137 aaKnown RBP15.55■□□□□ 0.08
NPHP4-206ENST00000468253 LINC00482Q8N8I6 264 aa15.55■□□□□ 0.08
NPHP4-206ENST00000468253 ADAD2Q8NCV1 583 aaKnown RBP15.55■□□□□ 0.08
NPHP4-206ENST00000468253 USMG5Q96IX5 58 aa15.55■□□□□ 0.08
NPHP4-206ENST00000468253 SRRQ9GZT4 340 aa15.55■□□□□ 0.08
NPHP4-206ENST00000468253 FKBP11Q9NYL4 201 aa15.55■□□□□ 0.08
NPHP4-206ENST00000468253 C14orf166Q9Y224 244 aaKnown RBP15.55■□□□□ 0.08
NPHP4-206ENST00000468253 C3orf85A0A1B0GTC6 90 aa15.54■□□□□ 0.08
NPHP4-206ENST00000468253 TEX22C9J3V5 150 aa15.54■□□□□ 0.08
NPHP4-206ENST00000468253 TRGV3P03979 118 aa15.54■□□□□ 0.08
NPHP4-206ENST00000468253 CD33P20138 364 aa15.54■□□□□ 0.08
NPHP4-206ENST00000468253 PPP5CP53041 499 aa15.54■□□□□ 0.08
NPHP4-206ENST00000468253 ZNF45Q02386 682 aa15.54■□□□□ 0.08
NPHP4-206ENST00000468253 KLK9Q2XQG4 91 aa15.54■□□□□ 0.08
NPHP4-206ENST00000468253 SEC22AQ96IW7 307 aa15.54■□□□□ 0.08
NPHP4-206ENST00000468253 MS4A10Q96PG2 267 aa15.54■□□□□ 0.08
NPHP4-206ENST00000468253 TSC22D3Q99576 134 aa15.54■□□□□ 0.08
NPHP4-206ENST00000468253 COMMD5Q9GZQ3 224 aa15.54■□□□□ 0.08
NPHP4-206ENST00000468253 GNB4Q9HAV0 340 aa15.54■□□□□ 0.08
NPHP4-206ENST00000468253 ZNF355PQ9NSJ1 428 aa15.54■□□□□ 0.08
NPHP4-206ENST00000468253 KLK9Q9UKQ9 250 aa15.54■□□□□ 0.08
NPHP4-206ENST00000468253 TRAV3A0A0B4J244 114 aa15.53■□□□□ 0.08
NPHP4-206ENST00000468253 NPIPB5A8MRT5 1133 aa15.53■□□□□ 0.08
NPHP4-206ENST00000468253 E7EUB6 86 aa15.53■□□□□ 0.08
NPHP4-206ENST00000468253 SNAPC5O75971 98 aa15.53■□□□□ 0.08
NPHP4-206ENST00000468253 ATG12O94817 140 aa15.53■□□□□ 0.08
NPHP4-206ENST00000468253 DUS4LO95620 317 aaKnown RBP15.53■□□□□ 0.08
NPHP4-206ENST00000468253 CRYGCP07315 174 aa15.53■□□□□ 0.08
NPHP4-206ENST00000468253 G6PCP35575 357 aa15.53■□□□□ 0.08
NPHP4-206ENST00000468253 TPPP2P59282 170 aa15.53■□□□□ 0.08
NPHP4-206ENST00000468253 OR2B8PP59922 312 aa15.53■□□□□ 0.08
NPHP4-206ENST00000468253 FHL3Q13643 280 aa15.53■□□□□ 0.08
NPHP4-206ENST00000468253 THOC7Q6I9Y2 204 aaKnown RBP15.53■□□□□ 0.08
NPHP4-206ENST00000468253 OR1N2Q8NGR9 330 aa15.53■□□□□ 0.08
NPHP4-206ENST00000468253 RCC1LQ96I51 464 aaKnown RBP15.53■□□□□ 0.08
NPHP4-206ENST00000468253 C5orf66Q9H5L9 145 aa15.53■□□□□ 0.08
NPHP4-206ENST00000468253 MCUBQ9NWR8 336 aa15.53■□□□□ 0.08
NPHP4-206ENST00000468253 ZNF257Q9Y2Q1 563 aa15.53■□□□□ 0.08
NPHP4-206ENST00000468253 TRBV9A0A0B4J1U6 114 aa15.52■□□□□ 0.08
NPHP4-206ENST00000468253 IGKV1-39P01597 117 aa15.52■□□□□ 0.08
NPHP4-206ENST00000468253 IGKV1D-39P04432 117 aa15.52■□□□□ 0.08
NPHP4-206ENST00000468253 C10orf55Q5SWW7 151 aa15.52■□□□□ 0.08
NPHP4-206ENST00000468253 OR11H1Q8NG94 326 aa15.52■□□□□ 0.08
NPHP4-206ENST00000468253 OR1L8Q8NGR8 309 aa15.52■□□□□ 0.08
NPHP4-206ENST00000468253 BATF3Q9NR55 127 aa15.52■□□□□ 0.08
NPHP4-206ENST00000468253 COA4Q9NYJ1 87 aa15.52■□□□□ 0.08
NPHP4-206ENST00000468253 PRNDQ9UKY0 176 aa15.52■□□□□ 0.08
NPHP4-206ENST00000468253 TEX50A0A1B0GTY4 177 aa15.51■□□□□ 0.07
NPHP4-206ENST00000468253 A0A1B0GW64 132 aa15.51■□□□□ 0.07
NPHP4-206ENST00000468253 LGALS1P09382 135 aaKnown RBP15.51■□□□□ 0.07
NPHP4-206ENST00000468253 UCP1P25874 307 aa15.51■□□□□ 0.07
NPHP4-206ENST00000468253 SAMD5Q5TGI4 173 aa15.51■□□□□ 0.07
NPHP4-206ENST00000468253 H2BFWTQ7Z2G1 175 aa15.51■□□□□ 0.07
NPHP4-206ENST00000468253 HSD17B13Q7Z5P4 300 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-206ENST00000468253 CASTOR1Q8WTX7 329 aa15.51■□□□□ 0.07
NPHP4-206ENST00000468253 FYTTD1Q96QD9 318 aaKnown RBP15.51■□□□□ 0.07
NPHP4-206ENST00000468253 TP53RKQ96S44 253 aa15.51■□□□□ 0.07
NPHP4-206ENST00000468253 SLC25A21Q9BQT8 299 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-206ENST00000468253 MCRIP2Q9BUT9 160 aaKnown RBP15.51■□□□□ 0.07
NPHP4-206ENST00000468253 KCNIP3Q9Y2W7 256 aa15.51■□□□□ 0.07
NPHP4-206ENST00000468253 TEX13DA0A0J9YY54 714 aaPredicted RBP15.5■□□□□ 0.07
NPHP4-206ENST00000468253 C13orf42A0A1B0GVH6 325 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 HMX3A6NHT5 357 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 CGB1A6NKQ9 187 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 CDS2O95674 445 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 DHFRP00374 187 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 HSPB1P04792 205 aaKnown RBP15.5■□□□□ 0.07
NPHP4-206ENST00000468253 TRAPPC2P0DI81 140 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 TRAPPC2BP0DI82 140 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 APELAP0DMC3 54 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 PSMB6P28072 239 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 DHODHQ02127 395 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 ZNF616Q08AN1 781 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 KPRPQ5T749 579 aaPredicted RBP15.5■□□□□ 0.07
NPHP4-206ENST00000468253 OR5B3Q8NH48 314 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 DPF1Q92782 380 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 QTRT1Q9BXR0 403 aaKnown RBP15.5■□□□□ 0.07
NPHP4-206ENST00000468253 GPR61Q9BZJ8 451 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 NAA60Q9H7X0 242 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 NDUFA4L2Q9NRX3 87 aa15.5■□□□□ 0.07
NPHP4-206ENST00000468253 CRYM-AS1A6NIL9 109 aa15.49■□□□□ 0.07
NPHP4-206ENST00000468253 FAM223BA6NKX1 122 aa15.49■□□□□ 0.07
NPHP4-206ENST00000468253 OR8U8P0C7N1 319 aa15.49■□□□□ 0.07
NPHP4-206ENST00000468253 CTRB1P17538 263 aa15.49■□□□□ 0.07
NPHP4-206ENST00000468253 BAK1Q16611 211 aa15.49■□□□□ 0.07
NPHP4-206ENST00000468253 DEFB136Q30KP8 78 aa15.49■□□□□ 0.07
NPHP4-206ENST00000468253 CTRB2Q6GPI1 263 aa15.49■□□□□ 0.07
NPHP4-206ENST00000468253 FAM223AQ8IWN6 122 aa15.49■□□□□ 0.07
NPHP4-206ENST00000468253 NECAP1Q8NC96 275 aa15.49■□□□□ 0.07
NPHP4-206ENST00000468253 GLYATL2Q8WU03 294 aa15.49■□□□□ 0.07
NPHP4-206ENST00000468253 GALNT14Q96FL9 552 aa15.49■□□□□ 0.07
NPHP4-206ENST00000468253 SDHCQ99643 169 aaPredicted RBP15.49■□□□□ 0.07
NPHP4-206ENST00000468253 TMEM222Q9H0R3 208 aa15.49■□□□□ 0.07
NPHP4-206ENST00000468253 TMEM14BQ9NUH8 114 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms