RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 AKIP1Q9NQ31 210 aa11.23□□□□□ -0.61
COMMD3-206ENST00000468179 EXTL2Q9UBQ6 330 aa11.23□□□□□ -0.61
COMMD3-206ENST00000468179 HMX3A6NHT5 357 aa11.22□□□□□ -0.61
COMMD3-206ENST00000468179 TEX22C9J3V5 150 aa11.22□□□□□ -0.61
COMMD3-206ENST00000468179 UPK2O00526 184 aa11.22□□□□□ -0.61
COMMD3-206ENST00000468179 CYB5BO43169 146 aa11.22□□□□□ -0.61
COMMD3-206ENST00000468179 NOL3O60936 208 aaKnown RBP11.22□□□□□ -0.61
COMMD3-206ENST00000468179 RLN1P04808 185 aa11.22□□□□□ -0.61
COMMD3-206ENST00000468179 IL6RP08887 468 aaPredicted RBP11.22□□□□□ -0.61
COMMD3-206ENST00000468179 DEFA4P12838 97 aa11.22□□□□□ -0.61
COMMD3-206ENST00000468179 TBPP20226 339 aa11.22□□□□□ -0.61
COMMD3-206ENST00000468179 EXOSC2Q13868 293 aaKnown RBP11.22□□□□□ -0.61
COMMD3-206ENST00000468179 VAX1Q5SQQ9 334 aa11.22□□□□□ -0.61
COMMD3-206ENST00000468179 HSD17B13Q7Z5P4 300 aaPredicted RBP11.22□□□□□ -0.61
COMMD3-206ENST00000468179 SLC38A6Q8IZM9 456 aa11.22□□□□□ -0.61
COMMD3-206ENST00000468179 CADM3Q8N126 398 aa11.22□□□□□ -0.61
COMMD3-206ENST00000468179 FAM212BQ9NTI7 297 aaPredicted RBP11.22□□□□□ -0.61
COMMD3-206ENST00000468179 RABL2AQ9UBK7 228 aaPredicted RBP11.22□□□□□ -0.61
COMMD3-206ENST00000468179 RABL2BQ9UNT1 228 aa11.22□□□□□ -0.61
COMMD3-206ENST00000468179 RGS5O15539 181 aa11.21□□□□□ -0.61
COMMD3-206ENST00000468179 SNAPC5O75971 98 aa11.21□□□□□ -0.61
COMMD3-206ENST00000468179 S1PR2O95136 353 aa11.21□□□□□ -0.61
COMMD3-206ENST00000468179 CRYGCP07315 174 aa11.21□□□□□ -0.61
COMMD3-206ENST00000468179 NHLRC4P0CG21 123 aaPredicted RBP11.21□□□□□ -0.61
COMMD3-206ENST00000468179 PSMB6P28072 239 aa11.21□□□□□ -0.61
COMMD3-206ENST00000468179 TMBIM6P55061 237 aa11.21□□□□□ -0.61
COMMD3-206ENST00000468179 UCP3P55916 312 aa11.21□□□□□ -0.61
COMMD3-206ENST00000468179 MRPS10P82664 201 aaKnown RBP11.21□□□□□ -0.61
COMMD3-206ENST00000468179 RNASE10Q5GAN6 216 aaKnown RBP11.21□□□□□ -0.61
COMMD3-206ENST00000468179 CLVS1Q8IUQ0 354 aaPredicted RBP11.21□□□□□ -0.61
COMMD3-206ENST00000468179 OR9G4Q8NGQ1 327 aa11.21□□□□□ -0.61
COMMD3-206ENST00000468179 FCAMRQ8WWV6 532 aa11.21□□□□□ -0.61
COMMD3-206ENST00000468179 RSRP1Q9BUV0 290 aa11.21□□□□□ -0.61
COMMD3-206ENST00000468179 TMEM140Q9NV12 185 aa11.21□□□□□ -0.61
COMMD3-206ENST00000468179 PEMTQ9UBM1 199 aa11.21□□□□□ -0.61
COMMD3-206ENST00000468179 FBXL7Q9UJT9 491 aa11.21□□□□□ -0.61
COMMD3-206ENST00000468179 LSM4Q9Y4Z0 139 aaKnown RBP11.21□□□□□ -0.61
COMMD3-206ENST00000468179 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.2□□□□□ -0.62
COMMD3-206ENST00000468179 MARCH11A6NNE9 402 aa11.2□□□□□ -0.62
COMMD3-206ENST00000468179 OR2J3O76001 311 aa11.2□□□□□ -0.62
COMMD3-206ENST00000468179 PRH1P02810 166 aa11.2□□□□□ -0.62
COMMD3-206ENST00000468179 LPAR6P43657 344 aa11.2□□□□□ -0.62
COMMD3-206ENST00000468179 RPL5P46777 297 aaKnown RBP11.2□□□□□ -0.62
COMMD3-206ENST00000468179 ZNF45Q02386 682 aa11.2□□□□□ -0.62
COMMD3-206ENST00000468179 C15orf32Q32M92 178 aa11.2□□□□□ -0.62
COMMD3-206ENST00000468179 ARRDC1Q8N5I2 433 aa11.2□□□□□ -0.62
COMMD3-206ENST00000468179 TSC22D3Q99576 134 aa11.2□□□□□ -0.62
COMMD3-206ENST00000468179 FXYD6Q9H0Q3 95 aa11.2□□□□□ -0.62
COMMD3-206ENST00000468179 FKBP11Q9NYL4 201 aa11.2□□□□□ -0.62
COMMD3-206ENST00000468179 THYN1Q9P016 225 aa11.2□□□□□ -0.62
COMMD3-206ENST00000468179 SMAD5-AS1Q9Y6J3 95 aa11.2□□□□□ -0.62
COMMD3-206ENST00000468179 H0Y980 276 aa11.19□□□□□ -0.62
COMMD3-206ENST00000468179 SPNP16150 400 aa11.19□□□□□ -0.62
COMMD3-206ENST00000468179 CTRB1P17538 263 aa11.19□□□□□ -0.62
COMMD3-206ENST00000468179 SYNJ2BPP57105 145 aa11.19□□□□□ -0.62
COMMD3-206ENST00000468179 OR2B8PP59922 312 aa11.19□□□□□ -0.62
COMMD3-206ENST00000468179 SSBP1Q04837 148 aaKnown RBP11.19□□□□□ -0.62
COMMD3-206ENST00000468179 PHLDA2Q53GA4 152 aa11.19□□□□□ -0.62
COMMD3-206ENST00000468179 CTRB2Q6GPI1 263 aa11.19□□□□□ -0.62
COMMD3-206ENST00000468179 EEF1AKMT3Q96AZ1 226 aa11.19□□□□□ -0.62
COMMD3-206ENST00000468179 ZNF486Q96H40 463 aaPredicted RBP11.19□□□□□ -0.62
COMMD3-206ENST00000468179 CXorf58Q96LI9 332 aa11.19□□□□□ -0.62
COMMD3-206ENST00000468179 QTRT1Q9BXR0 403 aaKnown RBP11.19□□□□□ -0.62
COMMD3-206ENST00000468179 SIGLEC8Q9NYZ4 499 aa11.19□□□□□ -0.62
COMMD3-206ENST00000468179 KLK11Q9UBX7 282 aa11.19□□□□□ -0.62
COMMD3-206ENST00000468179 MTFP1Q9UDX5 166 aa11.19□□□□□ -0.62
COMMD3-206ENST00000468179 E7EUB6 86 aa11.18□□□□□ -0.62
COMMD3-206ENST00000468179 GGCTO75223 188 aaKnown RBP11.18□□□□□ -0.62
COMMD3-206ENST00000468179 KRASP01116 189 aa11.18□□□□□ -0.62
COMMD3-206ENST00000468179 IGLV1-51P01701 117 aa11.18□□□□□ -0.62
COMMD3-206ENST00000468179 TRAPPC2P0DI81 140 aa11.18□□□□□ -0.62
COMMD3-206ENST00000468179 TRAPPC2BP0DI82 140 aa11.18□□□□□ -0.62
COMMD3-206ENST00000468179 GP9P14770 177 aa11.18□□□□□ -0.62
COMMD3-206ENST00000468179 AREGP15514 252 aa11.18□□□□□ -0.62
COMMD3-206ENST00000468179 DEFA5Q01523 94 aa11.18□□□□□ -0.62
COMMD3-206ENST00000468179 SPCS2Q15005 226 aa11.18□□□□□ -0.62
COMMD3-206ENST00000468179 KLK9Q2XQG4 91 aa11.18□□□□□ -0.62
COMMD3-206ENST00000468179 OR1L8Q8NGR8 309 aa11.18□□□□□ -0.62
COMMD3-206ENST00000468179 OR52I2Q8NH67 350 aa11.18□□□□□ -0.62
COMMD3-206ENST00000468179 CCDC59Q9P031 241 aaKnown RBP11.18□□□□□ -0.62
COMMD3-206ENST00000468179 KLK9Q9UKQ9 250 aa11.18□□□□□ -0.62
COMMD3-206ENST00000468179 PRNDQ9UKY0 176 aa11.18□□□□□ -0.62
COMMD3-206ENST00000468179 TGP01266 2768 aa11.18□□□□□ -0.62
COMMD3-206ENST00000468179 TRBV7-1A0A0A6YYK4 115 aa11.17□□□□□ -0.62
COMMD3-206ENST00000468179 GABARAPH6UMI1 98 aa11.17□□□□□ -0.62
COMMD3-206ENST00000468179 M0QYG6 137 aa11.17□□□□□ -0.62
COMMD3-206ENST00000468179 RBMXL2O75526 392 aaKnown RBP11.17□□□□□ -0.62
COMMD3-206ENST00000468179 PGAM2P15259 253 aa11.17□□□□□ -0.62
COMMD3-206ENST00000468179 TAS2R19P59542 299 aa11.17□□□□□ -0.62
COMMD3-206ENST00000468179 RNASE12Q5GAN4 147 aaKnown RBP11.17□□□□□ -0.62
COMMD3-206ENST00000468179 TBC1D26Q86UD7 250 aa11.17□□□□□ -0.62
COMMD3-206ENST00000468179 TMEM229BQ8NBD8 167 aa11.17□□□□□ -0.62
COMMD3-206ENST00000468179 ZFAND1Q8TCF1 268 aa11.17□□□□□ -0.62
COMMD3-206ENST00000468179 ABHD1Q96SE0 405 aa11.17□□□□□ -0.62
COMMD3-206ENST00000468179 TRAV3A0A0B4J244 114 aa11.16□□□□□ -0.62
COMMD3-206ENST00000468179 TEX50A0A1B0GTY4 177 aa11.16□□□□□ -0.62
COMMD3-206ENST00000468179 A0A1B0GW64 132 aa11.16□□□□□ -0.62
COMMD3-206ENST00000468179 BMPR1BO00238 502 aa11.16□□□□□ -0.62
COMMD3-206ENST00000468179 ATG12O94817 140 aa11.16□□□□□ -0.62
COMMD3-206ENST00000468179 NDUFB8O95169 186 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms