RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ATP6V0E1O15342 81 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 IFNA21P01568 189 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 RPL27AP46776 148 aaKnown RBP12□□□□□ -0.49
SNIP1-202ENST00000468040 OR2B8PP59922 312 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 SSBP2P81877 361 aaPredicted RBP12□□□□□ -0.49
SNIP1-202ENST00000468040 NDPQ00604 133 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 TATDN3Q17R31 274 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 NMSQ5H8A3 153 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 ZNF429Q86V71 674 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 C12orf45Q8N5I9 185 aaPredicted RBP12□□□□□ -0.49
SNIP1-202ENST00000468040 OR5B3Q8NH48 314 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 SGMS2Q8NHU3 365 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 GRPEL2Q8TAA5 225 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 CHPT1Q8WUD6 406 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 SRSF12Q8WXF0 261 aaKnown RBP12□□□□□ -0.49
SNIP1-202ENST00000468040 GPR146Q96CH1 333 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 SPIN2AQ99865 258 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 SPIN2BQ9BPZ2 258 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 C19orf24Q9BVV8 132 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 TMEM14BQ9NUH8 114 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 CACFD1Q9UGQ2 172 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 FOXA2Q9Y261 457 aaPredicted RBP12□□□□□ -0.49
SNIP1-202ENST00000468040 ZNF257Q9Y2Q1 563 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 NSG2Q9Y328 171 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 SETD2Q9BYW2 2564 aaPredicted RBP12□□□□□ -0.49
SNIP1-202ENST00000468040 C2CD3Q4AC94 2353 aa11.99□□□□□ -0.49
SNIP1-202ENST00000468040 A0A0G2JRQ6 117 aa11.99□□□□□ -0.49
SNIP1-202ENST00000468040 LINC01548A6NM66 108 aa11.99□□□□□ -0.49
SNIP1-202ENST00000468040 HOXB5P09067 269 aa11.99□□□□□ -0.49
SNIP1-202ENST00000468040 SULT1A3P0DMM9 295 aa11.99□□□□□ -0.49
SNIP1-202ENST00000468040 SULT1A4P0DMN0 295 aa11.99□□□□□ -0.49
SNIP1-202ENST00000468040 CRIP2P52943 208 aaPredicted RBP11.99□□□□□ -0.49
SNIP1-202ENST00000468040 TMEM267Q0VDI3 215 aaPredicted RBP11.99□□□□□ -0.49
SNIP1-202ENST00000468040 SMCO1Q147U7 214 aa11.99□□□□□ -0.49
SNIP1-202ENST00000468040 IZUMO4Q1ZYL8 232 aa11.99□□□□□ -0.49
SNIP1-202ENST00000468040 TMEM95Q3KNT9 176 aa11.99□□□□□ -0.49
SNIP1-202ENST00000468040 THOC7Q6I9Y2 204 aaKnown RBP11.99□□□□□ -0.49
SNIP1-202ENST00000468040 STPG2Q8N412 459 aa11.99□□□□□ -0.49
SNIP1-202ENST00000468040 PDCD10Q9BUL8 212 aa11.99□□□□□ -0.49
SNIP1-202ENST00000468040 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.99□□□□□ -0.49
SNIP1-202ENST00000468040 COA4Q9NYJ1 87 aa11.99□□□□□ -0.49
SNIP1-202ENST00000468040 CACNG5Q9UF02 275 aa11.99□□□□□ -0.49
SNIP1-202ENST00000468040 RNF114Q9Y508 228 aa11.99□□□□□ -0.49
SNIP1-202ENST00000468040 OR51B2Q9Y5P1 312 aa11.99□□□□□ -0.49
SNIP1-202ENST00000468040 A0A0B4J293 547 aa11.98□□□□□ -0.49
SNIP1-202ENST00000468040 A0A1B0GU03 582 aa11.98□□□□□ -0.49
SNIP1-202ENST00000468040 C7orf66A4D0T2 115 aa11.98□□□□□ -0.49
SNIP1-202ENST00000468040 MSGN1A6NI15 193 aa11.98□□□□□ -0.49
SNIP1-202ENST00000468040 DBX1A6NMT0 343 aa11.98□□□□□ -0.49
SNIP1-202ENST00000468040 SLC25A6P12236 298 aa11.98□□□□□ -0.49
SNIP1-202ENST00000468040 MDKP21741 143 aaPredicted RBP11.98□□□□□ -0.49
SNIP1-202ENST00000468040 AKIRIN2Q53H80 203 aa11.98□□□□□ -0.49
SNIP1-202ENST00000468040 C10orf55Q5SWW7 151 aa11.98□□□□□ -0.49
SNIP1-202ENST00000468040 GGNBP1Q5YKI7 109 aa11.98□□□□□ -0.49
SNIP1-202ENST00000468040 Q6ZRM9 215 aa11.98□□□□□ -0.49
SNIP1-202ENST00000468040 UXS1Q8NBZ7 420 aa11.98□□□□□ -0.49
SNIP1-202ENST00000468040 OR1L8Q8NGR8 309 aa11.98□□□□□ -0.49
SNIP1-202ENST00000468040 TMEM68Q96MH6 324 aa11.98□□□□□ -0.49
SNIP1-202ENST00000468040 SRSF8Q9BRL6 282 aaKnown RBP11.98□□□□□ -0.49
SNIP1-202ENST00000468040 FAM103A1Q9BTL3 118 aaKnown RBP11.98□□□□□ -0.49
SNIP1-202ENST00000468040 QTRT1Q9BXR0 403 aaKnown RBP11.98□□□□□ -0.49
SNIP1-202ENST00000468040 WNT10AQ9GZT5 417 aa11.98□□□□□ -0.49
SNIP1-202ENST00000468040 FBXO7Q9Y3I1 522 aa11.98□□□□□ -0.49
SNIP1-202ENST00000468040 TRAV41A0A0B4J266 112 aa11.97□□□□□ -0.49
SNIP1-202ENST00000468040 TEX50A0A1B0GTY4 177 aa11.97□□□□□ -0.49
SNIP1-202ENST00000468040 ADAP1O75689 374 aa11.97□□□□□ -0.49
SNIP1-202ENST00000468040 OPN1MWP04001 364 aa11.97□□□□□ -0.49
SNIP1-202ENST00000468040 OPN1MW2P0DN77 364 aa11.97□□□□□ -0.49
SNIP1-202ENST00000468040 OPN1MW3P0DN78 364 aa11.97□□□□□ -0.49
SNIP1-202ENST00000468040 EGR2P11161 476 aaPredicted RBP11.97□□□□□ -0.49
SNIP1-202ENST00000468040 HSPE1P61604 102 aaKnown RBP11.97□□□□□ -0.49
SNIP1-202ENST00000468040 SLC35B1P78383 322 aa11.97□□□□□ -0.49
SNIP1-202ENST00000468040 ECSCRQ19T08 205 aa11.97□□□□□ -0.49
SNIP1-202ENST00000468040 AARDQ4LEZ3 155 aa11.97□□□□□ -0.49
SNIP1-202ENST00000468040 HSD17B13Q7Z5P4 300 aaPredicted RBP11.97□□□□□ -0.49
SNIP1-202ENST00000468040 CENPVQ7Z7K6 275 aaPredicted RBP11.97□□□□□ -0.49
SNIP1-202ENST00000468040 MRPL41Q8IXM3 137 aaKnown RBP11.97□□□□□ -0.49
SNIP1-202ENST00000468040 NOL4LQ96MY1 436 aaPredicted RBP11.97□□□□□ -0.49
SNIP1-202ENST00000468040 FYTTD1Q96QD9 318 aaKnown RBP11.97□□□□□ -0.49
SNIP1-202ENST00000468040 PSMB11A5LHX3 300 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 ST8SIA3O43173 380 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 IFNA17P01571 189 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 TRAPPC2P0DI81 140 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 TRAPPC2BP0DI82 140 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 MYOD1P15172 320 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 PROK1P58294 105 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 AWAT1Q58HT5 328 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 UNQ5815/PRO19632Q6UWF5 114 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 KLHDC1Q8N7A1 406 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 LFNGQ8NES3 379 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 OR52E5Q8NH55 327 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 OR1S1Q8NH92 325 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 NDUFA4L2Q9NRX3 87 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 LINC00527Q9UJ94 153 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 ALG5Q9Y673 324 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 WSB1Q9Y6I7 421 aa11.96□□□□□ -0.49
SNIP1-202ENST00000468040 A0A1W2PN81 502 aa11.95□□□□□ -0.5
SNIP1-202ENST00000468040 TEX22C9J3V5 150 aa11.95□□□□□ -0.5
SNIP1-202ENST00000468040 G3V318 75 aa11.95□□□□□ -0.5
SNIP1-202ENST00000468040 SSNA1O43805 119 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms