RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 FOXF1Q12946 379 aa2.02□□□□□ -2.09
SMC4-208ENST00000467468 TMEM42Q69YG0 159 aa2.02□□□□□ -2.09
SMC4-208ENST00000467468 ANKRD29Q8N6D5 301 aa2.02□□□□□ -2.09
SMC4-208ENST00000467468 ZNF676Q8N7Q3 588 aa2.02□□□□□ -2.09
SMC4-208ENST00000467468 PHOSPHO2Q8TCD6 241 aa2.02□□□□□ -2.09
SMC4-208ENST00000467468 FGF13Q92913 245 aa2.02□□□□□ -2.09
SMC4-208ENST00000467468 BTF3L4Q96K17 158 aa2.02□□□□□ -2.09
SMC4-208ENST00000467468 WDR61Q9GZS3 305 aaKnown RBP2.02□□□□□ -2.09
SMC4-208ENST00000467468 TUBA4BQ9H853 241 aa2.02□□□□□ -2.09
SMC4-208ENST00000467468 EFCAB1Q9HAE3 211 aa2.02□□□□□ -2.09
SMC4-208ENST00000467468 NMNAT1Q9HAN9 279 aaPredicted RBP2.02□□□□□ -2.09
SMC4-208ENST00000467468 CCL26Q9Y258 94 aa2.02□□□□□ -2.09
SMC4-208ENST00000467468 ARL5AQ9Y689 179 aa2.02□□□□□ -2.09
SMC4-208ENST00000467468 TRIOBPQ9H2D6 2365 aa2.02□□□□□ -2.09
SMC4-208ENST00000467468 SHANK1Q9Y566 2161 aa2.02□□□□□ -2.09
SMC4-208ENST00000467468 REREQ9P2R6 1566 aa2.02□□□□□ -2.09
SMC4-208ENST00000467468 DSCAMO60469 2012 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 CACNA1SQ13698 1873 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 TRGV5A0A0B4J1U4 118 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 ZNF878C9JN71 531 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 OR2B3O76000 313 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 ALDH3A1P30838 453 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 S100A7P31151 101 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 CA5AP35218 305 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 FUSP35637 526 aaKnown RBP eCLIP2.01□□□□□ -2.09
SMC4-208ENST00000467468 RPS20P60866 119 aaKnown RBP2.01□□□□□ -2.09
SMC4-208ENST00000467468 AP1S1P61966 158 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 CCL20P78556 96 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 GLO1Q04760 184 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 LIN52Q52LA3 116 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 OR10X1Q8NGY0 326 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 MRPL30Q8TCC3 161 aaKnown RBP2.01□□□□□ -2.09
SMC4-208ENST00000467468 NIPSNAP1Q9BPW8 284 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 COMMD5Q9GZQ3 224 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 HIVEP2P31629 2446 aa2.01□□□□□ -2.09
SMC4-208ENST00000467468 ZNF638Q14966 1978 aaKnown RBP2.01□□□□□ -2.09
SMC4-208ENST00000467468 PIK3C2GO75747 1445 aa2□□□□□ -2.09
SMC4-208ENST00000467468 MUC21A0A0G2JKD1 596 aa2□□□□□ -2.09
SMC4-208ENST00000467468 A0A0J9YW62 118 aa2□□□□□ -2.09
SMC4-208ENST00000467468 MUC21A0A140T8X8 626 aa2□□□□□ -2.09
SMC4-208ENST00000467468 hADV38S2A0JD32 116 aa2□□□□□ -2.09
SMC4-208ENST00000467468 SDHAF1A6NFY7 115 aa2□□□□□ -2.09
SMC4-208ENST00000467468 LEPROTO15243 131 aa2□□□□□ -2.09
SMC4-208ENST00000467468 PDE6DO43924 150 aa2□□□□□ -2.09
SMC4-208ENST00000467468 SERPINA7P05543 415 aa2□□□□□ -2.09
SMC4-208ENST00000467468 IGKV4-1P06312 121 aa2□□□□□ -2.09
SMC4-208ENST00000467468 PPP1R2P41236 205 aa2□□□□□ -2.09
SMC4-208ENST00000467468 TAF1AQ15573 450 aaPredicted RBP2□□□□□ -2.09
SMC4-208ENST00000467468 PPP1R2P3Q6NXS1 205 aa2□□□□□ -2.09
SMC4-208ENST00000467468 ZNF767PQ75MW2 155 aa2□□□□□ -2.09
SMC4-208ENST00000467468 S100A7AQ86SG5 101 aa2□□□□□ -2.09
SMC4-208ENST00000467468 LHFPL1Q86WI0 220 aa2□□□□□ -2.09
SMC4-208ENST00000467468 OOSP2Q86WS3 158 aa2□□□□□ -2.09
SMC4-208ENST00000467468 SLC35F6Q8N357 371 aa2□□□□□ -2.09
SMC4-208ENST00000467468 PXT1Q8NFP0 134 aa2□□□□□ -2.09
SMC4-208ENST00000467468 OR51A2Q8NGJ7 313 aa2□□□□□ -2.09
SMC4-208ENST00000467468 CT55Q8WUE5 264 aa2□□□□□ -2.09
SMC4-208ENST00000467468 C9orf16Q9BUW7 83 aa2□□□□□ -2.09
SMC4-208ENST00000467468 KIFC1Q9BW19 673 aa2□□□□□ -2.09
SMC4-208ENST00000467468 C20orf27Q9GZN8 174 aa2□□□□□ -2.09
SMC4-208ENST00000467468 RNASE7Q9H1E1 156 aaKnown RBP2□□□□□ -2.09
SMC4-208ENST00000467468 FBXL12Q9NXK8 326 aa2□□□□□ -2.09
SMC4-208ENST00000467468 FUT9Q9Y231 359 aa2□□□□□ -2.09
SMC4-208ENST00000467468 RBM7Q9Y580 266 aaKnown RBP2□□□□□ -2.09
SMC4-208ENST00000467468 TMEM56-RWDD3S4R434 201 aa2□□□□□ -2.09
SMC4-208ENST00000467468 PCF11O94913 1555 aaKnown RBP2□□□□□ -2.09
SMC4-208ENST00000467468 ITGB4P16144 1822 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 C2orf74A8MZ97 194 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 SULT1B1O43704 296 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 ZNF189O75820 626 aaPredicted RBP1.99□□□□□ -2.09
SMC4-208ENST00000467468 CRYZL1O95825 349 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 C1QAP02745 245 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 PRM2P04554 102 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 TFPTP0C1Z6 253 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 GZMHP20718 246 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 MAGEA12P43365 314 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 C9orf64Q5T6V5 341 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 TEX36Q5VZQ5 186 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 BRD3OSQ6XYD6 125 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 OR52L1Q8NGH7 329 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 ACOT12Q8WYK0 555 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 Q9BRP9 147 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 TMEM147Q9BVK8 224 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 C14orf105Q9NVL8 296 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 IL36BQ9NZH7 164 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 STOML2Q9UJZ1 356 aa1.99□□□□□ -2.09
SMC4-208ENST00000467468 SLIT2O94813 1529 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 BPGMP07738 259 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 CCR2P41597 374 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 HIST1H4AP62805 103 aaKnown RBP1.98□□□□□ -2.09
SMC4-208ENST00000467468 HBA1P69905 142 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 RPL18Q07020 188 aaKnown RBP1.98□□□□□ -2.09
SMC4-208ENST00000467468 C12orf74Q32Q52 190 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 PABPC1L2AQ5JQF8 200 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 HACD4Q5VWC8 232 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 DHRS4L2Q6PKH6 230 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 AGTRAPQ6RW13 159 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 Q6ZS52 159 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 C12orf45Q8N5I9 185 aaPredicted RBP1.98□□□□□ -2.09
SMC4-208ENST00000467468 GDPD1Q8N9F7 314 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms