RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 LINC01553A4QN01 128 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 LINC01565O15544 149 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 NEURL1O76050 574 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 NDUFB4O95168 129 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 PVRP15151 417 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 AMTP48728 403 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 RPL27P61353 136 aaKnown RBP6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 FOXF2Q12947 444 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 LAGE3Q14657 143 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 PMVKQ15126 192 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 SPATA31B1PQ5VZV4 182 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 METTL27Q8N6F8 245 aaPredicted RBP6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 STPG4Q8N801 248 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 APCDD1LQ8NCL9 501 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 ZNF418Q8TF45 676 aaPredicted RBP6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 TMEM255BQ8WV15 326 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 IMMP2LQ96T52 175 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 COX11Q9Y6N1 276 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 TRANK1O15050 2925 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 GP1BBP13224 206 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 RAB38P57729 211 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 DEFB110Q30KQ9 67 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 C1QL3Q5VWW1 255 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 OR4C11Q6IEV9 310 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 NEGR1Q7Z3B1 354 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 GAPTQ8N292 157 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 ZNF502Q8TBZ5 544 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 VN1R17PQ8TDU5 208 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 C6orf106Q9H6K1 298 aaPredicted RBP6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 SLC7A7Q9UM01 511 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 WIPI2Q9Y4P8 454 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 MDC1Q14676 2089 aaKnown RBP6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 PLXNA2O75051 1894 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 ATG2AQ2TAZ0 1938 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 CDC14CA4D256 554 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 KLK2P20151 261 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 PPP1CCP36873 323 aaKnown RBP6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 PPP1CBP62140 327 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 HLA-DRB3P79483 266 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 DEFB134Q4QY38 66 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 ZNF506Q5JVG8 444 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 OR10G7Q8NGN6 311 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 SH3BGRL3Q9H299 93 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 TRAPPC2LQ9UL33 140 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 IGHV2OR16-5A0A0B4J2B6 119 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 OR5B21A6NL26 309 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 GPR137BO60478 399 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 SFT2D2O95562 160 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 APOHP02749 345 aaPredicted RBP6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 OR5AL1P0C617 328 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 FCGR2CP31995 323 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 RND3P61587 244 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 ZNF417Q8TAU3 575 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 LYSMD1Q96S90 227 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 TBX15Q96SF7 602 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 PRSS27Q9BQR3 290 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 PLA2G2FQ9BZM2 168 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 PARP12Q9H0J9 701 aaKnown RBP6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 FUT9Q9Y231 359 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 KCNE3Q9Y6H6 103 aa6.3□□□□□ -1.4
SPTBN1-204ENST00000467371 TCF20Q9UGU0 1960 aaKnown RBP6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 IGLV3-16A0A075B6K0 115 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 FABP5P3A8MUU1 101 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 OR5G3P0C626 314 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 MYOD1P15172 320 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 RPS4Y1P22090 263 aaKnown RBP6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 ICAM4Q14773 271 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 OR8I2Q8N0Y5 310 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 TMEM230Q96A57 120 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 VDAC3Q9Y277 283 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 RIIAD1A6NNX1 92 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 J3KT08 172 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 SLC17A2O00624 439 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 SMIM17P0DL12 118 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 GNG5P63218 68 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 OR1N2Q8NGR9 330 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 FAM3DQ96BQ1 224 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 GPR146Q96CH1 333 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 MRPL27Q9P0M9 148 aaKnown RBP6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 ZNF581Q9P0T4 197 aa6.29□□□□□ -1.4
SPTBN1-204ENST00000467371 CCL21O00585 134 aa6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 DEDDO75618 318 aa6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 CXCL12P48061 93 aa6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 TMEM183BQ1AE95 376 aa6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 FGF14Q92915 247 aa6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 GPER1Q99527 375 aa6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 RTBDNQ9BSG5 229 aaPredicted RBP6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 SLC25A33Q9BSK2 321 aa6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 HES7Q9BYE0 225 aa6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 MCTS1Q9ULC4 181 aaKnown RBP6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 COL4A3Q01955 1670 aa6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 ASXL3Q9C0F0 2248 aa6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 TRAV38-1A0A0B4J264 116 aa6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 HMGN2P05204 90 aaKnown RBP6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 DBIP07108 87 aaKnown RBP6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 ORM2P19652 201 aa6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 TCN2P20062 427 aa6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 CMPK1P30085 196 aa6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 UBE2NP61088 152 aaKnown RBP6.28□□□□□ -1.4
SPTBN1-204ENST00000467371 SUPT4H1P63272 117 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms