RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 PAX6P26367 422 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 MC5RP33032 325 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 DUTP33316 252 aaKnown RBP11.87□□□□□ -0.51
DDX56-208ENST00000467318 THBS3P49746 956 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 SP6Q3SY56 376 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 RBMS3Q6XE24 437 aaKnown RBP11.87□□□□□ -0.51
DDX56-208ENST00000467318 IL22RA2Q969J5 263 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 NABP2Q9BQ15 211 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 GINS3Q9BRX5 216 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 HRH4Q9H3N8 390 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 MXRA5Q9NR99 2828 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 TRIM77I1YAP6 450 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 TIMM23O14925 209 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 FBXO24O75426 580 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 CD1BP29016 333 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 LRRC75BQ2VPJ9 315 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 Q6YL49 198 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 MOB3BQ86TA1 216 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 ZNF695Q8IW36 515 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 OR5AN1Q8NGI8 311 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 OR4D5Q8NGN0 318 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 LYPD6BQ8NI32 183 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 C5orf30Q96GV9 206 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 SSX3Q99909 188 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 MRPL20Q9BYC9 149 aaKnown RBP11.87□□□□□ -0.51
DDX56-208ENST00000467318 SLC25A31Q9H0C2 315 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 CUBNO60494 3623 aa11.86□□□□□ -0.51
DDX56-208ENST00000467318 RNF212BA8MTL3 300 aa11.86□□□□□ -0.51
DDX56-208ENST00000467318 CTRB1P17538 263 aa11.86□□□□□ -0.51
DDX56-208ENST00000467318 CATR1Q13166 79 aa11.86□□□□□ -0.51
DDX56-208ENST00000467318 EIF4EBP1Q13541 118 aaPredicted RBP11.86□□□□□ -0.51
DDX56-208ENST00000467318 CTRB2Q6GPI1 263 aa11.86□□□□□ -0.51
DDX56-208ENST00000467318 DHRS7BQ6IAN0 325 aaPredicted RBP11.86□□□□□ -0.51
DDX56-208ENST00000467318 THNSL2Q86YJ6 484 aa11.86□□□□□ -0.51
DDX56-208ENST00000467318 SSMEM1Q8WWF3 244 aa11.86□□□□□ -0.51
DDX56-208ENST00000467318 CFHR4Q92496 578 aa11.86□□□□□ -0.51
DDX56-208ENST00000467318 ZNF48Q96MX3 618 aaPredicted RBP11.86□□□□□ -0.51
DDX56-208ENST00000467318 PRELID3BQ9Y3B1 194 aa11.86□□□□□ -0.51
DDX56-208ENST00000467318 MDFIC2A0A1B0GVS7 189 aa11.85□□□□□ -0.51
DDX56-208ENST00000467318 FAM90A9PA6NNJ1 464 aa11.85□□□□□ -0.51
DDX56-208ENST00000467318 PGLYRP1O75594 196 aaPredicted RBP11.85□□□□□ -0.51
DDX56-208ENST00000467318 APOA2P02652 100 aa11.85□□□□□ -0.51
DDX56-208ENST00000467318 CD5P06127 495 aa11.85□□□□□ -0.51
DDX56-208ENST00000467318 H2AFB1P0C5Y9 115 aa11.85□□□□□ -0.51
DDX56-208ENST00000467318 FAM106CPP0CH98 169 aa11.85□□□□□ -0.51
DDX56-208ENST00000467318 LPAR6P43657 344 aa11.85□□□□□ -0.51
DDX56-208ENST00000467318 RAB13P51153 203 aa11.85□□□□□ -0.51
DDX56-208ENST00000467318 PEA15Q15121 130 aa11.85□□□□□ -0.51
DDX56-208ENST00000467318 OR5R1Q8NH85 324 aa11.85□□□□□ -0.51
DDX56-208ENST00000467318 ZNF418Q8TF45 676 aaPredicted RBP11.85□□□□□ -0.51
DDX56-208ENST00000467318 RCL1Q9Y2P8 373 aaKnown RBP11.85□□□□□ -0.51
DDX56-208ENST00000467318 BTBD17A6NE02 478 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 LINC00473A8K010 186 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 H0YJW9 148 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 H7C2Y5 167 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 TNFSF12O43508 249 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 TSPAN15O95858 294 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 IER3P46695 156 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 FLI1Q01543 452 aaPredicted RBP11.84□□□□□ -0.51
DDX56-208ENST00000467318 Q6ZRG5 221 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 TBC1D26Q86UD7 250 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 SELENOHQ8IZQ5 122 aaKnown RBP11.84□□□□□ -0.51
DDX56-208ENST00000467318 PUSL1Q8N0Z8 303 aaKnown RBP11.84□□□□□ -0.51
DDX56-208ENST00000467318 TCTEX1D1Q8N7M0 179 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 SIGLECL1Q8N7X8 197 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 ZNF383Q8NA42 475 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 DDB2Q92466 427 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 NUPL2O15504 423 aaKnown RBP11.84□□□□□ -0.51
DDX56-208ENST00000467318 SPP1P10451 314 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 F2RP25116 425 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 KIR2DS2P43631 304 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 NKX2-1P43699 371 aaPredicted RBP11.84□□□□□ -0.51
DDX56-208ENST00000467318 LINC00205P59089 165 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 VAMP2P63027 116 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 EBI3Q14213 229 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 ZNF266Q14584 549 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 RTL8BQ17RB0 113 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 PDPNQ86YL7 162 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 TMEM86BQ8N661 226 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 SLC35G3Q8N808 338 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 PIFOQ8TCI5 191 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 CD300LFQ8TDQ1 290 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 TCTEX1D2Q8WW35 142 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 TP53RKQ96S44 253 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 SLC35D1Q9NTN3 355 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 LIN7CQ9NUP9 197 aaKnown RBP11.84□□□□□ -0.51
DDX56-208ENST00000467318 PITPNC1Q9UKF7 332 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 WASHC3Q9Y3C0 194 aa11.84□□□□□ -0.51
DDX56-208ENST00000467318 IGHV3-72A0A0B4J1Y9 119 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 FAM74A7A6NL05 159 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 H3BUX3 64 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 VENTXO95231 258 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 SLC25A6P12236 298 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 VDAC1P21796 283 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 UCP1P25874 307 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 AKR1C2P52895 323 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 RPL30P62888 115 aaKnown RBP11.83□□□□□ -0.52
DDX56-208ENST00000467318 AKR1C1Q04828 323 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 FAM74A3Q4VXF1 159 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 FAM219AQ8IW50 185 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms