RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 RBM39Q14498 530 aaKnown RBP4.09□□□□□ -1.75
PTCD3-207ENST00000467273 ZNF146Q15072 292 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 SPHARQ15513 63 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 ACSM3Q53FZ2 586 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 TMEM42Q69YG0 159 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 LCN12Q6JVE5 192 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 TMED4Q7Z7H5 227 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 JAGN1Q8N5M9 183 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 OR8B12Q8NGG6 310 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 OR52L1Q8NGH7 329 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 OR6M1Q8NGM8 313 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 THAP6Q8TBB0 222 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 S1PR3Q99500 378 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 TMED9Q9BVK6 235 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 YTHDF1Q9BYJ9 559 aaKnown RBP4.09□□□□□ -1.75
PTCD3-207ENST00000467273 MRPS26Q9BYN8 205 aaKnown RBP4.09□□□□□ -1.75
PTCD3-207ENST00000467273 LINC00574Q9H8X3 128 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 SIGLEC8Q9NYZ4 499 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 PTTG2Q9NZH5 202 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 COPS3Q9UNS2 423 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 SLC7A11Q9UPY5 501 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 ARL2BPQ9Y2Y0 163 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 PKHD1P08F94 4074 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 DNAH10Q8IVF4 4471 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 TRAV18A0A075B6X5 111 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 TRBV9A0A0B4J1U6 114 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 TRBV4-1A0A0J9YWV2 114 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 A0A1B0GVY2 172 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 BBIP1A8MTZ0 92 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 FXYD1O00168 92 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 SULT1C2O00338 296 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 ARPC5O15511 151 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 ZNF682O95780 498 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 HAND1O96004 215 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 MOSP00540 346 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 IFNA21P01568 189 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 ORM1P02763 201 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 HSPB1P04792 205 aaKnown RBP4.08□□□□□ -1.76
PTCD3-207ENST00000467273 CD5P06127 495 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 SMIM18P0DKX4 95 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 ANXA3P12429 323 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 SPI1P17947 270 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 AADACP22760 399 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 FASP25445 335 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 EPHA2P29317 976 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 P2RY1P47900 373 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 RANP62826 216 aaKnown RBP4.08□□□□□ -1.76
PTCD3-207ENST00000467273 RAB40BQ12829 278 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 PDZD11Q5EBL8 140 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 RBM48Q5RL73 367 aaKnown RBP4.08□□□□□ -1.76
PTCD3-207ENST00000467273 ZFP1Q6P2D0 407 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 FAHD1Q6P587 224 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 BAIAP2L2Q6UXY1 529 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 Q75L30 129 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 MREGQ8N565 214 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 TCTEX1D1Q8N7M0 179 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 TPRX1Q8N7U7 411 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 LFNGQ8NES3 379 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 OR52I1Q8NGK6 324 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 OR2K2Q8NGT1 345 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 OR6K6Q8NGW6 343 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 OTOSQ8NHW6 89 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 RNASEH2CQ8TDP1 164 aaKnown RBP4.08□□□□□ -1.76
PTCD3-207ENST00000467273 TMED6Q8WW62 240 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 ZNRF4Q8WWF5 429 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 MARC2Q969Z3 335 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 YIPF6Q96EC8 236 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 EBF4Q9BQW3 602 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 BARHL1Q9BZE3 327 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 CSTL1Q9H114 145 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 RHOFQ9HBH0 211 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 RETNQ9HD89 108 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 PLSCR3Q9NRY6 295 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 FGFR1OP2Q9NVK5 253 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 ZNF221Q9UK13 617 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 RAB26Q9ULW5 256 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 BAIAP2Q9UQB8 552 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 WDR83OSQ9Y284 106 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 NUBP2Q9Y5Y2 271 aa4.08□□□□□ -1.76
PTCD3-207ENST00000467273 IGHV1-3A0A0C4DH29 117 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 ODAMA1E959 279 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 DISC1C4P0D8 188 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 SIRPB1O00241 398 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 HSD17B6O14756 317 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 CYB5AP00167 134 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 IFNGP01579 166 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 GTF2F2P13984 249 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 MYOD1P15172 320 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 SSTR5P35346 364 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 RPL19P84098 196 aaKnown RBP4.07□□□□□ -1.76
PTCD3-207ENST00000467273 MLLT11Q13015 90 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-207ENST00000467273 GAGE2BQ13066 116 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 LRRC36Q1X8D7 754 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 GAGE2EQ4V326 116 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 LINC01590Q5TEZ4 76 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 GAGE2AQ6NT46 116 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 Q6ZSR3 168 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 SSX6Q7RTT6 188 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 ARPINQ7Z6K5 226 aa4.07□□□□□ -1.76
PTCD3-207ENST00000467273 MOB3BQ86TA1 216 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms