RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 TMEM213A2RRL7 107 aa0.5□□□□□ -2.33
SMC4-207ENST00000467263 PMP2P02689 132 aa0.5□□□□□ -2.33
SMC4-207ENST00000467263 CDK10Q15131 360 aa0.5□□□□□ -2.33
SMC4-207ENST00000467263 TEX36Q5VZQ5 186 aa0.5□□□□□ -2.33
SMC4-207ENST00000467263 KRTAP19-3Q7Z4W3 81 aa0.5□□□□□ -2.33
SMC4-207ENST00000467263 FAM19A5Q7Z5A7 132 aaPredicted RBP0.5□□□□□ -2.33
SMC4-207ENST00000467263 C12orf29Q8N999 325 aa0.5□□□□□ -2.33
SMC4-207ENST00000467263 TRABDQ9H4I3 376 aa0.5□□□□□ -2.33
SMC4-207ENST00000467263 BAIAP2Q9UQB8 552 aa0.5□□□□□ -2.33
SMC4-207ENST00000467263 TRAV14DV4A0A0A6YYC5 116 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 IRGMA1A4Y4 181 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 I3L521 148 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 SLC22A1O15245 554 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 SULT1A3P0DMM9 295 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 SULT1A4P0DMN0 295 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 UGT2B7P16662 529 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 RUNX1Q01196 453 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 NDUFA5Q16718 116 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 TNFAIP8L3Q5GJ75 292 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 SDHAF4Q5VUM1 108 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 TMEM251Q8N6I4 163 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 OR7G1Q8NGA0 311 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 OR1M1Q8NGA1 313 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 AQP3Q92482 292 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 ANKRD7Q92527 254 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 YIPF3Q9GZM5 350 aa0.49□□□□□ -2.33
SMC4-207ENST00000467263 KIF15Q9NS87 1388 aa0.48□□□□□ -2.33
SMC4-207ENST00000467263 SYNRGQ9UMZ2 1314 aa0.48□□□□□ -2.33
SMC4-207ENST00000467263 GOLGA6L10A6NI86 522 aa0.48□□□□□ -2.33
SMC4-207ENST00000467263 REG1AP05451 166 aa0.48□□□□□ -2.33
SMC4-207ENST00000467263 DDTP30046 118 aa0.48□□□□□ -2.33
SMC4-207ENST00000467263 S100A7P31151 101 aa0.48□□□□□ -2.33
SMC4-207ENST00000467263 ZNF345Q14585 488 aa0.48□□□□□ -2.33
SMC4-207ENST00000467263 C1orf194Q5T5A4 169 aa0.48□□□□□ -2.33
SMC4-207ENST00000467263 FUNDC1Q8IVP5 155 aa0.48□□□□□ -2.33
SMC4-207ENST00000467263 C10orf67Q8IYJ2 551 aa0.48□□□□□ -2.33
SMC4-207ENST00000467263 MRPL57Q9BQC6 102 aaKnown RBP0.48□□□□□ -2.33
SMC4-207ENST00000467263 EIF4G1Q04637 1599 aaKnown RBP0.48□□□□□ -2.33
SMC4-207ENST00000467263 TNRC6BQ9UPQ9 1833 aaKnown RBP0.48□□□□□ -2.33
SMC4-207ENST00000467263 STRCQ7RTU9 1775 aa0.47□□□□□ -2.33
SMC4-207ENST00000467263 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.47□□□□□ -2.33
SMC4-207ENST00000467263 IQCF5A8MTL0 148 aa0.47□□□□□ -2.33
SMC4-207ENST00000467263 LST1O00453 97 aa0.47□□□□□ -2.33
SMC4-207ENST00000467263 BIRC5O15392 142 aa0.47□□□□□ -2.33
SMC4-207ENST00000467263 HPGDSO60760 199 aa0.47□□□□□ -2.33
SMC4-207ENST00000467263 OR4D2P58180 307 aa0.47□□□□□ -2.33
SMC4-207ENST00000467263 ZNF846Q147U1 533 aa0.47□□□□□ -2.33
SMC4-207ENST00000467263 FAM78BQ5VT40 261 aa0.47□□□□□ -2.33
SMC4-207ENST00000467263 HIST2H3AQ71DI3 136 aa0.47□□□□□ -2.33
SMC4-207ENST00000467263 DHRS9Q9BPW9 319 aa0.47□□□□□ -2.33
SMC4-207ENST00000467263 DCUN1D5Q9BTE7 237 aa0.47□□□□□ -2.33
SMC4-207ENST00000467263 NDEL1Q9GZM8 345 aa0.47□□□□□ -2.33
SMC4-207ENST00000467263 PAQR5Q9NXK6 330 aaPredicted RBP0.47□□□□□ -2.33
SMC4-207ENST00000467263 OR5AC2Q9NZP5 309 aa0.47□□□□□ -2.33
SMC4-207ENST00000467263 EML5Q05BV3 1969 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 ANAPC1Q9H1A4 1944 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 LAMA4Q16363 1823 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 TRBV6-7A0A0A0MS04 114 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 ERICH2A1L162 156 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 GGT3PA6NGU5 568 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 C21orf140B9A014 251 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 HLA-DRAP01903 254 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 METTL15P1P0C7V9 234 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 CCL1P22362 96 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 EIF2B2P49770 351 aaKnown RBP0.46□□□□□ -2.34
SMC4-207ENST00000467263 FXYD2P54710 66 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 POLR2GP62487 172 aaKnown RBP eCLIP0.46□□□□□ -2.34
SMC4-207ENST00000467263 SUPT4H1P63272 117 aaKnown RBP0.46□□□□□ -2.34
SMC4-207ENST00000467263 PPP1R1AQ13522 171 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 C5orf46Q6UWT4 87 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 SMIM19Q96E16 107 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 OBSCN-AS1Q96MR7 158 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 WDR54Q9H977 334 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 SPACA1Q9HBV2 294 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 SPANXB1Q9NS25 103 aaPredicted RBP0.46□□□□□ -2.34
SMC4-207ENST00000467263 AK3Q9UIJ7 227 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 PXMP4Q9Y6I8 212 aa0.46□□□□□ -2.34
SMC4-207ENST00000467263 TTC21AQ8NDW8 1320 aa0.45□□□□□ -2.34
SMC4-207ENST00000467263 USP24Q9UPU5 2620 aa0.45□□□□□ -2.34
SMC4-207ENST00000467263 IGHV3-7P01780 117 aa0.45□□□□□ -2.34
SMC4-207ENST00000467263 CDC34P49427 236 aaPredicted RBP0.45□□□□□ -2.34
SMC4-207ENST00000467263 TNFAIP6P98066 277 aaPredicted RBP0.45□□□□□ -2.34
SMC4-207ENST00000467263 OR4C6Q8NH72 309 aa0.45□□□□□ -2.34
SMC4-207ENST00000467263 DNAJB3Q8WWF6 145 aa0.45□□□□□ -2.34
SMC4-207ENST00000467263 DKKL1Q9UK85 242 aa0.45□□□□□ -2.34
SMC4-207ENST00000467263 FUT9Q9Y231 359 aa0.45□□□□□ -2.34
SMC4-207ENST00000467263 MAST2Q6P0Q8 1798 aa0.45□□□□□ -2.34
SMC4-207ENST00000467263 A0A087WX48 190 aa0.44□□□□□ -2.34
SMC4-207ENST00000467263 IGHV1-69-2A0A0G2JMI3 117 aa0.44□□□□□ -2.34
SMC4-207ENST00000467263 OR4C45A6NMZ5 311 aa0.44□□□□□ -2.34
SMC4-207ENST00000467263 HSBP1L1C9JCN9 74 aa0.44□□□□□ -2.34
SMC4-207ENST00000467263 F5H768 121 aa0.44□□□□□ -2.34
SMC4-207ENST00000467263 IL3P08700 152 aa0.44□□□□□ -2.34
SMC4-207ENST00000467263 NFYAP23511 347 aaPredicted RBP0.44□□□□□ -2.34
SMC4-207ENST00000467263 UBE2IP63279 158 aaKnown RBP0.44□□□□□ -2.34
SMC4-207ENST00000467263 SLC51BQ86UW2 128 aa0.44□□□□□ -2.34
SMC4-207ENST00000467263 JOSD2Q8TAC2 188 aa0.44□□□□□ -2.34
SMC4-207ENST00000467263 KCTD7Q96MP8 289 aa0.44□□□□□ -2.34
SMC4-207ENST00000467263 FKBP14Q9NWM8 211 aa0.44□□□□□ -2.34
SMC4-207ENST00000467263 RSL24D1Q9UHA3 163 aaKnown RBP0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms