RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 A0A1B0GW64 132 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 IGSF23A1L1A6 192 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 L7N2F9 121 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 WRBO00258 174 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 RRHO14718 337 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 NBR2O15453 112 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 MED6O75586 246 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 OR2F2O95006 317 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 RPL12P30050 165 aaKnown RBP10.37□□□□□ -0.75
COL4A1-202ENST00000467182 BRS3P32247 399 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 TAS2R30P59541 319 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 BPIFB3P59826 476 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 RPL8P62917 257 aaKnown RBP10.37□□□□□ -0.75
COL4A1-202ENST00000467182 OR2F1Q13607 317 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 HNF4GQ14541 408 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 PRSS8Q16651 343 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 C9orf139Q6ZV77 190 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 BCL6BQ8N143 479 aaPredicted RBP10.37□□□□□ -0.75
COL4A1-202ENST00000467182 OR2C3Q8N628 320 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 DTD1Q8TEA8 209 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 METTL1Q9UBP6 276 aaKnown RBP10.37□□□□□ -0.75
COL4A1-202ENST00000467182 NUP50Q9UKX7 468 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 WSB1Q9Y6I7 421 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 ZANQ9Y493 2812 aa10.37□□□□□ -0.75
COL4A1-202ENST00000467182 A0A0D9SG52 128 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 FCN1O00602 326 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 CD5LO43866 347 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 GPR137BO60478 399 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 RBMXL2O75526 392 aaKnown RBP10.36□□□□□ -0.75
COL4A1-202ENST00000467182 IFNA17P01571 189 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 TMEM11P17152 192 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 PVALBP20472 110 aaPredicted RBP10.36□□□□□ -0.75
COL4A1-202ENST00000467182 S100A11P31949 105 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 AP2S1P53680 142 aaPredicted RBP10.36□□□□□ -0.75
COL4A1-202ENST00000467182 VAMP2P63027 116 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 PRCDQ00LT1 54 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 IFITM2Q01629 132 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 OPCMLQ14982 345 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 MMDQ15546 238 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 TMEM252Q8N6L7 170 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 OR5B3Q8NH48 314 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 OR4C12Q96R67 309 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 NDUFA4L2Q9NRX3 87 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 PSENENQ9NZ42 101 aa10.36□□□□□ -0.75
COL4A1-202ENST00000467182 MDFIC2A0A1B0GVS7 189 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 PMS2P5A8MQ11 134 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 CEBPZOSA8MTT3 80 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 H3BP45 60 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 TSC22D2O75157 780 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 FBP1P09467 338 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 FAM106CPP0CH98 169 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 EWSR1Q01844 656 aaKnown RBP eCLIP10.35□□□□□ -0.75
COL4A1-202ENST00000467182 HES1Q14469 280 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 C5orf64Q2M2E5 130 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 TUSC1Q2TAM9 212 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 C10orf55Q5SWW7 151 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 CLEC9AQ6UXN8 241 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 TMEM14EPQ6UXP3 125 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 HAPLN4Q86UW8 402 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 PPP1R27Q86WC6 154 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 MMD2Q8IY49 270 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 Q8N9W7 124 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 INO80EQ8NBZ0 244 aaPredicted RBP10.35□□□□□ -0.75
COL4A1-202ENST00000467182 TMEM170AQ8WVE7 144 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 ARL6Q9H0F7 186 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 CYTL1Q9NRR1 136 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 FKBP11Q9NYL4 201 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 CACFD1Q9UGQ2 172 aa10.35□□□□□ -0.75
COL4A1-202ENST00000467182 CCDC168Q8NDH2 2452 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 TNCP24821 2201 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 ABCA1O95477 2261 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 INS-IGF2F8WCM5 200 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 BCL2L11O43521 198 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 OPN1MWP04001 364 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 OPN1MW2P0DN77 364 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 OPN1MW3P0DN78 364 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 MAS1LP35410 378 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 CAV2P51636 162 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 RPL23AP62750 156 aaKnown RBP10.34□□□□□ -0.75
COL4A1-202ENST00000467182 NHLH2Q02577 135 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 ARL16Q0P5N6 197 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 AANATQ16613 207 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 LRRC75BQ2VPJ9 315 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 DEFB112Q30KQ8 113 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 NANPQ8TBE9 248 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 CIB3Q96Q77 187 aaPredicted RBP10.34□□□□□ -0.75
COL4A1-202ENST00000467182 CLCC1Q96S66 551 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 SSX3Q99909 188 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 CREBBPQ92793 2442 aa10.34□□□□□ -0.75
COL4A1-202ENST00000467182 CELSR1Q9NYQ6 3014 aa10.33□□□□□ -0.75
COL4A1-202ENST00000467182 A6NDX4 124 aa10.33□□□□□ -0.76
COL4A1-202ENST00000467182 C15orf62A8K5M9 175 aa10.33□□□□□ -0.76
COL4A1-202ENST00000467182 TEX22C9J3V5 150 aa10.33□□□□□ -0.76
COL4A1-202ENST00000467182 CA2P00918 260 aa10.33□□□□□ -0.76
COL4A1-202ENST00000467182 NUP62P37198 522 aaPredicted RBP10.33□□□□□ -0.76
COL4A1-202ENST00000467182 COMPP49747 757 aaPredicted RBP10.33□□□□□ -0.76
COL4A1-202ENST00000467182 TMEM267Q0VDI3 215 aaPredicted RBP10.33□□□□□ -0.76
COL4A1-202ENST00000467182 TNXAQ16473 311 aa10.33□□□□□ -0.76
COL4A1-202ENST00000467182 BSXQ3C1V8 233 aa10.33□□□□□ -0.76
COL4A1-202ENST00000467182 SPANXN5Q5MJ07 72 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms