RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 C10orf55Q5SWW7 151 aa7.34□□□□□ -1.23
SDCCAG3-208ENST00000466579 FAAP20Q6NZ36 180 aa7.34□□□□□ -1.23
SDCCAG3-208ENST00000466579 OR5T1Q8NG75 326 aa7.34□□□□□ -1.23
SDCCAG3-208ENST00000466579 OR13C8Q8NGS7 320 aa7.34□□□□□ -1.23
SDCCAG3-208ENST00000466579 RCC1LQ96I51 464 aaKnown RBP7.34□□□□□ -1.23
SDCCAG3-208ENST00000466579 PRRT1Q99946 306 aa7.34□□□□□ -1.23
SDCCAG3-208ENST00000466579 SRSF8Q9BRL6 282 aaKnown RBP7.34□□□□□ -1.23
SDCCAG3-208ENST00000466579 SRRQ9GZT4 340 aa7.34□□□□□ -1.23
SDCCAG3-208ENST00000466579 TMEM140Q9NV12 185 aa7.34□□□□□ -1.23
SDCCAG3-208ENST00000466579 GPR132Q9UNW8 380 aa7.34□□□□□ -1.23
SDCCAG3-208ENST00000466579 TRAV3A0A0B4J244 114 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 A6NHS1 94 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 WIPF1O43516 503 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 DUS4LO95620 317 aaKnown RBP7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 P0C879 139 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 PI3P19957 117 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 CD40LGP29965 261 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 PPP5CP53041 499 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 OR2B8PP59922 312 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 ERVK-16P61578 105 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 DEFB136Q30KP8 78 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 SCGB2B2Q4G0G5 96 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 PYDC2Q56P42 97 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 SPANXN2Q5MJ10 180 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 SSX9Q7RTT3 188 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 SLC25A42Q86VD7 318 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 Q8N402 240 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 GDPD1Q8N9F7 314 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 CCDC71LQ8N9Z2 235 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 MARCH1Q8TCQ1 289 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 CASTOR1Q8WTX7 329 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 SEC22AQ96IW7 307 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 USMG5Q96IX5 58 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 RTBDNQ9BSG5 229 aaPredicted RBP7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 C5orf66Q9H5L9 145 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 ZNF257Q9Y2Q1 563 aa7.33□□□□□ -1.24
SDCCAG3-208ENST00000466579 A0A0G2JLM5 398 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 G3V4G9 280 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 RBMXL2O75526 392 aaKnown RBP7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 KRASP01116 189 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 TRGV3P03979 118 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 OR8U8P0C7N1 319 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 CTRB1P17538 263 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 CD33P20138 364 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 UCP1P25874 307 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 G6PCP35575 357 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 TPPP2P59282 170 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 AP3S2P59780 193 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 ZNF45Q02386 682 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 CTRB2Q6GPI1 263 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 THOC7Q6I9Y2 204 aaKnown RBP7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 ZNF343Q6P1L6 599 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 LINC00299Q6ZSB3 139 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 DMBX1Q8NFW5 382 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 OR11H1Q8NG94 326 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 OR51S1Q8NGJ8 323 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 OR1N2Q8NGR9 330 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 MS4A10Q96PG2 267 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 TP53RKQ96S44 253 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 PHB2Q99623 299 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 SDHCQ99643 169 aaPredicted RBP7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 MCRIP2Q9BUT9 160 aaKnown RBP7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 HRASLSQ9HDD0 168 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 TMEM14BQ9NUH8 114 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 COPZ2Q9P299 210 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 SCP2D1Q9UJQ7 156 aa7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 PRKDCP78527 4128 aaKnown RBP7.32□□□□□ -1.24
SDCCAG3-208ENST00000466579 C3orf85A0A1B0GTC6 90 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 TEX50A0A1B0GTY4 177 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 IGLC7A0M8Q6 106 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 HMX3A6NHT5 357 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 CRYM-AS1A6NIL9 109 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 FAM223BA6NKX1 122 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 IGKV1-5P01602 117 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 SERPINE2P07093 398 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 MYOD1P15172 320 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 IGLL1P15814 213 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 PSMB6P28072 239 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 FAUP35544 74 aaKnown RBP7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 ZNF616Q08AN1 781 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 OXLD1Q5BKU9 147 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 HSD17B13Q7Z5P4 300 aaPredicted RBP7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 FAM223AQ8IWN6 122 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 NECAP1Q8NC96 275 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 SCGB3A2Q96PL1 93 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 FANCD2OSQ96PS1 177 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 DUX3Q96PT4 197 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 FYTTD1Q96QD9 318 aaKnown RBP7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 TSC22D3Q99576 134 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 QTRT1Q9BXR0 403 aaKnown RBP7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 GPR61Q9BZJ8 451 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 COMMD5Q9GZQ3 224 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 NDUFA4L2Q9NRX3 87 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 COA4Q9NYJ1 87 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 FKBP11Q9NYL4 201 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 PRNDQ9UKY0 176 aa7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 C14orf166Q9Y224 244 aaKnown RBP7.31□□□□□ -1.24
SDCCAG3-208ENST00000466579 IGLV11-55A0A075B6I3 123 aa7.3□□□□□ -1.24
SDCCAG3-208ENST00000466579 C13orf42A0A1B0GVH6 325 aa7.3□□□□□ -1.24
SDCCAG3-208ENST00000466579 C15orf61A6NNL5 157 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms