RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 ASPHD1Q5U4P2 390 aa14.37□□□□□ -0.11
HOXA9-203ENST00000465941 PHB2Q99623 299 aa14.37□□□□□ -0.11
HOXA9-203ENST00000465941 SNAPC5O75971 98 aa14.36□□□□□ -0.11
HOXA9-203ENST00000465941 NDUFB6O95139 128 aa14.36□□□□□ -0.11
HOXA9-203ENST00000465941 RPLP1P05386 114 aaKnown RBP14.36□□□□□ -0.11
HOXA9-203ENST00000465941 BTCP35070 178 aa14.36□□□□□ -0.11
HOXA9-203ENST00000465941 RPL27AP46776 148 aaKnown RBP14.36□□□□□ -0.11
HOXA9-203ENST00000465941 CDX1P47902 265 aaPredicted RBP14.36□□□□□ -0.11
HOXA9-203ENST00000465941 RAB9AP51151 201 aa14.36□□□□□ -0.11
HOXA9-203ENST00000465941 RPL23AP62750 156 aaKnown RBP14.36□□□□□ -0.11
HOXA9-203ENST00000465941 TRIM16LQ309B1 348 aa14.36□□□□□ -0.11
HOXA9-203ENST00000465941 TMEM128Q5BJH2 165 aa14.36□□□□□ -0.11
HOXA9-203ENST00000465941 TMEM65Q6PI78 240 aa14.36□□□□□ -0.11
HOXA9-203ENST00000465941 H2BFWTQ7Z2G1 175 aa14.36□□□□□ -0.11
HOXA9-203ENST00000465941 MYOZ3Q8TDC0 251 aa14.36□□□□□ -0.11
HOXA9-203ENST00000465941 TSC22D3Q99576 134 aa14.36□□□□□ -0.11
HOXA9-203ENST00000465941 KLK15Q9H2R5 256 aa14.36□□□□□ -0.11
HOXA9-203ENST00000465941 TEX22C9J3V5 150 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 E7EUB6 86 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 H3BUA1 57 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 LYRM1O43325 122 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 BRI3O95415 125 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 IGKV1-5P01602 117 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 OR9G9P0C7N8 305 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 PF4V1P10720 104 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 SUPT4H1P63272 117 aaKnown RBP14.35□□□□□ -0.11
HOXA9-203ENST00000465941 KIAA0141Q14154 515 aaPredicted RBP14.35□□□□□ -0.11
HOXA9-203ENST00000465941 KHDC1LQ5JSQ8 128 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 LCNL1Q6ZST4 164 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 TMED4Q7Z7H5 227 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 OR5T1Q8NG75 326 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 TMEM56Q96MV1 263 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 COMMD5Q9GZQ3 224 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 FKBP11Q9NYL4 201 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 PRNDQ9UKY0 176 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 TMEM56-RWDD3S4R434 201 aa14.35□□□□□ -0.11
HOXA9-203ENST00000465941 A0A1B0GW64 132 aa14.34□□□□□ -0.11
HOXA9-203ENST00000465941 A0A1W2PRX2 142 aa14.34□□□□□ -0.11
HOXA9-203ENST00000465941 PLXNB1O43157 2135 aa14.34□□□□□ -0.11
HOXA9-203ENST00000465941 UPK1BO75841 260 aa14.34□□□□□ -0.11
HOXA9-203ENST00000465941 P0C879 139 aa14.34□□□□□ -0.11
HOXA9-203ENST00000465941 MYOD1P15172 320 aa14.34□□□□□ -0.11
HOXA9-203ENST00000465941 SLC6A1P30531 599 aa14.34□□□□□ -0.11
HOXA9-203ENST00000465941 OR2B8PP59922 312 aa14.34□□□□□ -0.11
HOXA9-203ENST00000465941 TMEM187Q14656 261 aa14.34□□□□□ -0.11
HOXA9-203ENST00000465941 TTC9CQ8N5M4 171 aa14.34□□□□□ -0.11
HOXA9-203ENST00000465941 FAM110DQ8TAY7 271 aaPredicted RBP14.34□□□□□ -0.11
HOXA9-203ENST00000465941 SLA2Q9H6Q3 261 aa14.34□□□□□ -0.11
HOXA9-203ENST00000465941 TMEM14BQ9NUH8 114 aa14.34□□□□□ -0.11
HOXA9-203ENST00000465941 TET2Q6N021 2002 aaPredicted RBP14.33□□□□□ -0.12
HOXA9-203ENST00000465941 TEX50A0A1B0GTY4 177 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 HMX3A6NHT5 357 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 CGB1A6NKQ9 187 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 TSPAN15O95858 294 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 APELAP0DMC3 54 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 ANXA3P12429 323 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 SLC25A42Q86VD7 318 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 ZNF695Q8IW36 515 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 SELENOHQ8IZQ5 122 aaKnown RBP14.33□□□□□ -0.12
HOXA9-203ENST00000465941 CENPSQ8N2Z9 138 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 ZNF491Q8N8L2 437 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 OR4F17Q8NGA8 305 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 LHFPL5Q8TAF8 219 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 RBPMSQ93062 196 aaKnown RBP14.33□□□□□ -0.12
HOXA9-203ENST00000465941 IL22RA2Q969J5 263 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 UBE2E2Q96LR5 201 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 FYTTD1Q96QD9 318 aaKnown RBP14.33□□□□□ -0.12
HOXA9-203ENST00000465941 OR4F4Q96R69 305 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 SRSF8Q9BRL6 282 aaKnown RBP14.33□□□□□ -0.12
HOXA9-203ENST00000465941 NSG2Q9Y328 171 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 OR51B2Q9Y5P1 312 aa14.33□□□□□ -0.12
HOXA9-203ENST00000465941 C15orf61A6NNL5 157 aa14.32□□□□□ -0.12
HOXA9-203ENST00000465941 AKR1C2P52895 323 aa14.32□□□□□ -0.12
HOXA9-203ENST00000465941 UBE2MP61081 183 aaKnown RBP14.32□□□□□ -0.12
HOXA9-203ENST00000465941 TMEM268Q5VZI3 342 aa14.32□□□□□ -0.12
HOXA9-203ENST00000465941 THOC7Q6I9Y2 204 aaKnown RBP14.32□□□□□ -0.12
HOXA9-203ENST00000465941 FAM219AQ8IW50 185 aa14.32□□□□□ -0.12
HOXA9-203ENST00000465941 OR1L8Q8NGR8 309 aa14.32□□□□□ -0.12
HOXA9-203ENST00000465941 OR5B3Q8NH48 314 aa14.32□□□□□ -0.12
HOXA9-203ENST00000465941 OR4A16Q8NH70 328 aa14.32□□□□□ -0.12
HOXA9-203ENST00000465941 RRNAD1Q96FB5 475 aaKnown RBP14.32□□□□□ -0.12
HOXA9-203ENST00000465941 QTRT1Q9BXR0 403 aaKnown RBP14.32□□□□□ -0.12
HOXA9-203ENST00000465941 NDUFA4L2Q9NRX3 87 aa14.32□□□□□ -0.12
HOXA9-203ENST00000465941 NPIPB5A8MRT5 1133 aa14.31□□□□□ -0.12
HOXA9-203ENST00000465941 TRAPPC2P0DI81 140 aa14.31□□□□□ -0.12
HOXA9-203ENST00000465941 TRAPPC2BP0DI82 140 aa14.31□□□□□ -0.12
HOXA9-203ENST00000465941 SRPXP78539 464 aa14.31□□□□□ -0.12
HOXA9-203ENST00000465941 ASAH1Q13510 395 aa14.31□□□□□ -0.12
HOXA9-203ENST00000465941 CASTOR1Q8WTX7 329 aa14.31□□□□□ -0.12
HOXA9-203ENST00000465941 MS4A10Q96PG2 267 aa14.31□□□□□ -0.12
HOXA9-203ENST00000465941 ZNF355PQ9NSJ1 428 aa14.31□□□□□ -0.12
HOXA9-203ENST00000465941 COA4Q9NYJ1 87 aa14.31□□□□□ -0.12
HOXA9-203ENST00000465941 TBC1D24Q9ULP9 559 aa14.31□□□□□ -0.12
HOXA9-203ENST00000465941 ZNF257Q9Y2Q1 563 aa14.31□□□□□ -0.12
HOXA9-203ENST00000465941 A0A0B4J293 547 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 PIGBOS1A0A0B4J2F0 54 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 IGLC7A0M8Q6 106 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 DBX1A6NMT0 343 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 NUDT19A8MXV4 375 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 TRGV3P03979 118 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms