RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 OR2F2O95006 317 aa13.69□□□□□ -0.22
PTPRU-206ENST00000465525 SPDEFO95238 335 aa13.69□□□□□ -0.22
PTPRU-206ENST00000465525 PRSS8Q16651 343 aa13.69□□□□□ -0.22
PTPRU-206ENST00000465525 PPP1R27Q86WC6 154 aa13.69□□□□□ -0.22
PTPRU-206ENST00000465525 FAM71E2Q8N5Q1 922 aa13.69□□□□□ -0.22
PTPRU-206ENST00000465525 OR4D5Q8NGN0 318 aa13.69□□□□□ -0.22
PTPRU-206ENST00000465525 VSTM2AQ8TAG5 236 aa13.69□□□□□ -0.22
PTPRU-206ENST00000465525 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.69□□□□□ -0.22
PTPRU-206ENST00000465525 POMT1Q9Y6A1 747 aa13.69□□□□□ -0.22
PTPRU-206ENST00000465525 CA2P00918 260 aa13.68□□□□□ -0.22
PTPRU-206ENST00000465525 GIPP09681 153 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-206ENST00000465525 S100A10P60903 97 aa13.68□□□□□ -0.22
PTPRU-206ENST00000465525 RPL8P62917 257 aaKnown RBP13.68□□□□□ -0.22
PTPRU-206ENST00000465525 TNXAQ16473 311 aa13.68□□□□□ -0.22
PTPRU-206ENST00000465525 Q5BKY6 102 aa13.68□□□□□ -0.22
PTPRU-206ENST00000465525 TMEM86BQ8N661 226 aa13.68□□□□□ -0.22
PTPRU-206ENST00000465525 HINT2Q9BX68 163 aa13.68□□□□□ -0.22
PTPRU-206ENST00000465525 C1RLQ9NZP8 487 aa13.68□□□□□ -0.22
PTPRU-206ENST00000465525 MOB4Q9Y3A3 225 aa13.68□□□□□ -0.22
PTPRU-206ENST00000465525 OR51B2Q9Y5P1 312 aa13.68□□□□□ -0.22
PTPRU-206ENST00000465525 MBPP02686 304 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-206ENST00000465525 SLC25A6P12236 298 aa13.67□□□□□ -0.22
PTPRU-206ENST00000465525 IL15RAQ13261 267 aa13.67□□□□□ -0.22
PTPRU-206ENST00000465525 RAB32Q13637 225 aa13.67□□□□□ -0.22
PTPRU-206ENST00000465525 ZFP69Q49AA0 526 aa13.67□□□□□ -0.22
PTPRU-206ENST00000465525 C5orf56Q8N8D9 126 aa13.67□□□□□ -0.22
PTPRU-206ENST00000465525 OR4A5Q8NH83 315 aa13.67□□□□□ -0.22
PTPRU-206ENST00000465525 JMJD8Q96S16 334 aa13.67□□□□□ -0.22
PTPRU-206ENST00000465525 RASL11BQ9BPW5 248 aa13.67□□□□□ -0.22
PTPRU-206ENST00000465525 NMES1Q9C002 83 aa13.67□□□□□ -0.22
PTPRU-206ENST00000465525 TMEM14BQ9NUH8 114 aa13.67□□□□□ -0.22
PTPRU-206ENST00000465525 PITPNC1Q9UKF7 332 aa13.67□□□□□ -0.22
PTPRU-206ENST00000465525 VPREB3Q9UKI3 123 aa13.67□□□□□ -0.22
PTPRU-206ENST00000465525 LSM5Q9Y4Y9 91 aaKnown RBP13.67□□□□□ -0.22
PTPRU-206ENST00000465525 TEX50A0A1B0GTY4 177 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 DNAJC9-AS1A6NH13 148 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 IFNA17P01571 189 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 AMY1AP04745 511 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 SRSF4Q08170 494 aaKnown RBP13.66□□□□□ -0.22
PTPRU-206ENST00000465525 OR8H1Q8NGG4 311 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 OR2T35Q8NGX2 323 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 PPP1R1CQ8WVI7 109 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 ESM1Q9NQ30 184 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 COA4Q9NYJ1 87 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 PRNDQ9UKY0 176 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 FOXA2Q9Y261 457 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-206ENST00000465525 E7EUB6 86 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 APELAP0DMC3 54 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 NKX2-1P43699 371 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-206ENST00000465525 HILS1P60008 231 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 RAP2BP61225 183 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 POLR2GP62487 172 aaKnown RBP eCLIP13.66□□□□□ -0.22
PTPRU-206ENST00000465525 SSBP2P81877 361 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-206ENST00000465525 MMD2Q8IY49 270 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 TCTE3Q8IZS6 198 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 HSPB9Q9BQS6 159 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 COMMD5Q9GZQ3 224 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 RBKSQ9H477 322 aa13.66□□□□□ -0.22
PTPRU-206ENST00000465525 CLDN34H7C241 214 aa13.65□□□□□ -0.22
PTPRU-206ENST00000465525 SSSCA1O60232 199 aa13.65□□□□□ -0.22
PTPRU-206ENST00000465525 CNIH1O95406 144 aa13.65□□□□□ -0.22
PTPRU-206ENST00000465525 CYCSP99999 105 aaKnown RBP13.65□□□□□ -0.22
PTPRU-206ENST00000465525 TNFRSF9Q07011 255 aa13.65□□□□□ -0.22
PTPRU-206ENST00000465525 C9orf152Q5JTZ5 239 aa13.65□□□□□ -0.22
PTPRU-206ENST00000465525 PAIP2BQ9ULR5 123 aaKnown RBP13.65□□□□□ -0.22
PTPRU-206ENST00000465525 RCL1Q9Y2P8 373 aaKnown RBP13.65□□□□□ -0.22
PTPRU-206ENST00000465525 TRAV14DV4A0A0A6YYC5 116 aa13.64□□□□□ -0.23
PTPRU-206ENST00000465525 A0A1B0GW64 132 aa13.64□□□□□ -0.23
PTPRU-206ENST00000465525 CGB1A6NKQ9 187 aa13.64□□□□□ -0.23
PTPRU-206ENST00000465525 K7EPK0 472 aa13.64□□□□□ -0.23
PTPRU-206ENST00000465525 TCF21O43680 179 aa13.64□□□□□ -0.23
PTPRU-206ENST00000465525 ACTL6BO94805 426 aa13.64□□□□□ -0.23
PTPRU-206ENST00000465525 IAPPP10997 89 aa13.64□□□□□ -0.23
PTPRU-206ENST00000465525 NDPQ00604 133 aa13.64□□□□□ -0.23
PTPRU-206ENST00000465525 ID3Q02535 119 aa13.64□□□□□ -0.23
PTPRU-206ENST00000465525 OR10W1Q8NGF6 305 aa13.64□□□□□ -0.23
PTPRU-206ENST00000465525 GRPEL2Q8TAA5 225 aa13.64□□□□□ -0.23
PTPRU-206ENST00000465525 FAM103A1Q9BTL3 118 aaKnown RBP13.64□□□□□ -0.23
PTPRU-206ENST00000465525 HSPB7Q9UBY9 170 aa13.64□□□□□ -0.23
PTPRU-206ENST00000465525 LINC01548A6NM66 108 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 CEBPZOSA8MTT3 80 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 G3V3Q6 166 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 COMPP49747 757 aaPredicted RBP13.63□□□□□ -0.23
PTPRU-206ENST00000465525 HSPE1P61604 102 aaKnown RBP13.63□□□□□ -0.23
PTPRU-206ENST00000465525 BLCAPP62952 87 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 CX3CL1P78423 397 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 FXYD3Q14802 87 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 Q6ZS46 218 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 ZNF429Q86V71 674 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 ABHD5Q8WTS1 349 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 OR5AC2Q9NZP5 309 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 IGHV7-81A0A0B4J1V7 117 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 H0YIZ8 118 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 WRBO00258 174 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 FGF16O43320 207 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 KCNAB3O43448 404 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 MPC2O95563 127 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 PSMB6P28072 239 aa13.63□□□□□ -0.23
PTPRU-206ENST00000465525 RPL27AP46776 148 aaKnown RBP13.63□□□□□ -0.23
PTPRU-206ENST00000465525 AARDQ4LEZ3 155 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms