RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 FAM110DQ8TAY7 271 aaPredicted RBP10.71□□□□□ -0.69
LIMD1-203ENST00000465039 C4orf3Q8WVX3 66 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 IL22RA2Q969J5 263 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 SEC22AQ96IW7 307 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 WDR12Q9GZL7 423 aaKnown RBP10.71□□□□□ -0.69
LIMD1-203ENST00000465039 COMMD5Q9GZQ3 224 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 NAA60Q9H7X0 242 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 CACFD1Q9UGQ2 172 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 PRNDQ9UKY0 176 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 ZNF257Q9Y2Q1 563 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 NBEAL1Q6ZS30 2694 aa10.71□□□□□ -0.7
LIMD1-203ENST00000465039 A0A1W2PN81 502 aa10.7□□□□□ -0.7
LIMD1-203ENST00000465039 SNAPC5O75971 98 aa10.7□□□□□ -0.7
LIMD1-203ENST00000465039 CDS2O95674 445 aa10.7□□□□□ -0.7
LIMD1-203ENST00000465039 OR9G9P0C7N8 305 aa10.7□□□□□ -0.7
LIMD1-203ENST00000465039 PI3P19957 117 aa10.7□□□□□ -0.7
LIMD1-203ENST00000465039 CHRNA7P36544 502 aa10.7□□□□□ -0.7
LIMD1-203ENST00000465039 RAB9AP51151 201 aa10.7□□□□□ -0.7
LIMD1-203ENST00000465039 UBE2MP61081 183 aaKnown RBP10.7□□□□□ -0.7
LIMD1-203ENST00000465039 KLK9Q2XQG4 91 aa10.7□□□□□ -0.7
LIMD1-203ENST00000465039 KHDC1LQ5JSQ8 128 aa10.7□□□□□ -0.7
LIMD1-203ENST00000465039 SGPP2Q8IWX5 399 aa10.7□□□□□ -0.7
LIMD1-203ENST00000465039 MRPL41Q8IXM3 137 aaKnown RBP10.7□□□□□ -0.7
LIMD1-203ENST00000465039 TP53RKQ96S44 253 aa10.7□□□□□ -0.7
LIMD1-203ENST00000465039 KLK9Q9UKQ9 250 aa10.7□□□□□ -0.7
LIMD1-203ENST00000465039 VSIG4Q9Y279 399 aa10.7□□□□□ -0.7
LIMD1-203ENST00000465039 KCNIP3Q9Y2W7 256 aa10.7□□□□□ -0.7
LIMD1-203ENST00000465039 A0A0G2JLM5 398 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 TEX13DA0A0J9YY54 714 aaPredicted RBP10.69□□□□□ -0.7
LIMD1-203ENST00000465039 MSGN1A6NI15 193 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 C15orf61A6NNL5 157 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 NPIPB5A8MRT5 1133 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 SOX15O60248 233 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 TSPAN15O95858 294 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 DHFRP00374 187 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 KRASP01116 189 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 RPLP1P05386 114 aaKnown RBP10.69□□□□□ -0.7
LIMD1-203ENST00000465039 PF4V1P10720 104 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 ANXA3P12429 323 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 OR2B8PP59922 312 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 TMEM128Q5BJH2 165 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 ASPHD1Q5U4P2 390 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 SSX9Q7RTT3 188 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 H2BFWTQ7Z2G1 175 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 ZNF429Q86V71 674 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 TTC9CQ8N5M4 171 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 ADAD2Q8NCV1 583 aaKnown RBP10.69□□□□□ -0.7
LIMD1-203ENST00000465039 PHB2Q99623 299 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 FAM103A1Q9BTL3 118 aaKnown RBP10.69□□□□□ -0.7
LIMD1-203ENST00000465039 QTRT1Q9BXR0 403 aaKnown RBP10.69□□□□□ -0.7
LIMD1-203ENST00000465039 TMEM14BQ9NUH8 114 aa10.69□□□□□ -0.7
LIMD1-203ENST00000465039 FAM223BA6NKX1 122 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 TEX22C9J3V5 150 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 NDUFB6O95139 128 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 CRYGCP07315 174 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 P0C879 139 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 G6PCP35575 357 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 TRIM16LQ309B1 348 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 NSUN5P1Q3KNT7 163 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 AARDQ4LEZ3 155 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 FAM223AQ8IWN6 122 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 ZNF491Q8N8L2 437 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 KLHL30-AS1Q8NEE0 82 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 OR1L8Q8NGR8 309 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 GLYATL2Q8WU03 294 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 RBPMSQ93062 196 aaKnown RBP10.68□□□□□ -0.7
LIMD1-203ENST00000465039 USMG5Q96IX5 58 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 TMEM56Q96MV1 263 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 TMEM56-RWDD3S4R434 201 aa10.68□□□□□ -0.7
LIMD1-203ENST00000465039 DUXBA0A1W2PPF3 345 aa10.67□□□□□ -0.7
LIMD1-203ENST00000465039 NUDT19A8MXV4 375 aa10.67□□□□□ -0.7
LIMD1-203ENST00000465039 CYB5BO43169 146 aa10.67□□□□□ -0.7
LIMD1-203ENST00000465039 IGKV1-39P01597 117 aa10.67□□□□□ -0.7
LIMD1-203ENST00000465039 IGKV1D-39P04432 117 aa10.67□□□□□ -0.7
LIMD1-203ENST00000465039 OR5AC1P0C628 307 aa10.67□□□□□ -0.7
LIMD1-203ENST00000465039 MYCNOSP40205 109 aa10.67□□□□□ -0.7
LIMD1-203ENST00000465039 AKR1C2P52895 323 aa10.67□□□□□ -0.7
LIMD1-203ENST00000465039 FHL3Q13643 280 aa10.67□□□□□ -0.7
LIMD1-203ENST00000465039 KIAA0141Q14154 515 aaPredicted RBP10.67□□□□□ -0.7
LIMD1-203ENST00000465039 ZNF846Q147U1 533 aa10.67□□□□□ -0.7
LIMD1-203ENST00000465039 WFDC9Q8NEX5 89 aa10.67□□□□□ -0.7
LIMD1-203ENST00000465039 LSM10Q969L4 123 aaKnown RBP10.67□□□□□ -0.7
LIMD1-203ENST00000465039 TMEM230Q96A57 120 aa10.67□□□□□ -0.7
LIMD1-203ENST00000465039 RRNAD1Q96FB5 475 aaKnown RBP10.67□□□□□ -0.7
LIMD1-203ENST00000465039 KLK15Q9H2R5 256 aa10.67□□□□□ -0.7
LIMD1-203ENST00000465039 NOTCH3Q9UM47 2321 aa10.66□□□□□ -0.7
LIMD1-203ENST00000465039 TRBV9A0A0B4J1U6 114 aa10.66□□□□□ -0.7
LIMD1-203ENST00000465039 IGLC7A0M8Q6 106 aa10.66□□□□□ -0.7
LIMD1-203ENST00000465039 INS-IGF2F8WCM5 200 aa10.66□□□□□ -0.7
LIMD1-203ENST00000465039 DUS4LO95620 317 aaKnown RBP10.66□□□□□ -0.7
LIMD1-203ENST00000465039 PF4P02776 101 aa10.66□□□□□ -0.7
LIMD1-203ENST00000465039 LGALS1P09382 135 aaKnown RBP10.66□□□□□ -0.7
LIMD1-203ENST00000465039 TRAPPC2P0DI81 140 aa10.66□□□□□ -0.7
LIMD1-203ENST00000465039 TRAPPC2BP0DI82 140 aa10.66□□□□□ -0.7
LIMD1-203ENST00000465039 HIST1H1BP16401 226 aaKnown RBP10.66□□□□□ -0.7
LIMD1-203ENST00000465039 TPPP2P59282 170 aa10.66□□□□□ -0.7
LIMD1-203ENST00000465039 C10orf55Q5SWW7 151 aa10.66□□□□□ -0.7
LIMD1-203ENST00000465039 CENPSQ8N2Z9 138 aa10.66□□□□□ -0.7
LIMD1-203ENST00000465039 NECAP1Q8NC96 275 aa10.66□□□□□ -0.7
LIMD1-203ENST00000465039 OR1L6Q8NGR2 347 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms