RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 GATAD1Q8WUU5 269 aa10.82□□□□□ -0.68
MCF2L-220ENST00000464800 ATG5Q9H1Y0 275 aa10.82□□□□□ -0.68
MCF2L-220ENST00000464800 KLK9Q9UKQ9 250 aa10.82□□□□□ -0.68
MCF2L-220ENST00000464800 HERC2O95714 4834 aa10.82□□□□□ -0.68
MCF2L-220ENST00000464800 KMT2AQ03164 3969 aa10.82□□□□□ -0.68
MCF2L-220ENST00000464800 IGHV3-35A0A0C4DH35 117 aa10.81□□□□□ -0.68
MCF2L-220ENST00000464800 TSPAN4O14817 238 aa10.81□□□□□ -0.68
MCF2L-220ENST00000464800 RPL35AP18077 110 aaKnown RBP10.81□□□□□ -0.68
MCF2L-220ENST00000464800 NFYAP23511 347 aaPredicted RBP10.81□□□□□ -0.68
MCF2L-220ENST00000464800 DTYMKP23919 212 aa10.81□□□□□ -0.68
MCF2L-220ENST00000464800 MYL9P24844 172 aa10.81□□□□□ -0.68
MCF2L-220ENST00000464800 RPL8P62917 257 aaKnown RBP10.81□□□□□ -0.68
MCF2L-220ENST00000464800 ARL6IP1Q15041 203 aa10.81□□□□□ -0.68
MCF2L-220ENST00000464800 ODF3L2Q3SX64 289 aa10.81□□□□□ -0.68
MCF2L-220ENST00000464800 PLET1Q6UQ28 207 aa10.81□□□□□ -0.68
MCF2L-220ENST00000464800 ZNF367Q7RTV3 350 aa10.81□□□□□ -0.68
MCF2L-220ENST00000464800 TCTEX1D2Q8WW35 142 aa10.81□□□□□ -0.68
MCF2L-220ENST00000464800 HSD17B10Q99714 261 aaKnown RBP10.81□□□□□ -0.68
MCF2L-220ENST00000464800 OR2W1Q9Y3N9 320 aa10.81□□□□□ -0.68
MCF2L-220ENST00000464800 TRDV1A0A1B0GX56 115 aa10.8□□□□□ -0.68
MCF2L-220ENST00000464800 IGLV2-14P01704 120 aa10.8□□□□□ -0.68
MCF2L-220ENST00000464800 HLA-DQB1P01920 261 aa10.8□□□□□ -0.68
MCF2L-220ENST00000464800 TBCEQ15813 527 aaPredicted RBP10.8□□□□□ -0.68
MCF2L-220ENST00000464800 SSX9Q7RTT3 188 aa10.8□□□□□ -0.68
MCF2L-220ENST00000464800 NR2C2APQ86WQ0 139 aa10.8□□□□□ -0.68
MCF2L-220ENST00000464800 ZNF502Q8TBZ5 544 aa10.8□□□□□ -0.68
MCF2L-220ENST00000464800 ZNF436Q9C0F3 470 aaPredicted RBP10.8□□□□□ -0.68
MCF2L-220ENST00000464800 NDUFB11Q9NX14 153 aa10.8□□□□□ -0.68
MCF2L-220ENST00000464800 SPATA2Q9UM82 520 aa10.8□□□□□ -0.68
MCF2L-220ENST00000464800 OR4C46A6NHA9 309 aa10.79□□□□□ -0.68
MCF2L-220ENST00000464800 HRASP01112 189 aa10.79□□□□□ -0.68
MCF2L-220ENST00000464800 CTXN2P0C2S0 81 aa10.79□□□□□ -0.68
MCF2L-220ENST00000464800 HLA-GP17693 338 aa10.79□□□□□ -0.68
MCF2L-220ENST00000464800 FCGR2BP31994 310 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-220ENST00000464800 HACD4Q5VWC8 232 aa10.79□□□□□ -0.68
MCF2L-220ENST00000464800 LAMTOR1Q6IAA8 161 aa10.79□□□□□ -0.68
MCF2L-220ENST00000464800 C22orf42Q6IC83 251 aa10.79□□□□□ -0.68
MCF2L-220ENST00000464800 TMEM190Q8WZ59 177 aa10.79□□□□□ -0.68
MCF2L-220ENST00000464800 GALNT14Q96FL9 552 aa10.79□□□□□ -0.68
MCF2L-220ENST00000464800 MFFQ9GZY8 342 aa10.79□□□□□ -0.68
MCF2L-220ENST00000464800 DCSTAMPQ9H295 470 aa10.79□□□□□ -0.68
MCF2L-220ENST00000464800 MAP6D1Q9H9H5 199 aa10.79□□□□□ -0.68
MCF2L-220ENST00000464800 DAZ1Q9NQZ3 744 aaKnown RBP10.79□□□□□ -0.68
MCF2L-220ENST00000464800 IGKV1D-13A0A0B4J2D9 117 aa10.78□□□□□ -0.68
MCF2L-220ENST00000464800 SMIM30A4D0T7 59 aa10.78□□□□□ -0.68
MCF2L-220ENST00000464800 TGOLN2O43493 480 aa10.78□□□□□ -0.68
MCF2L-220ENST00000464800 S1PR2O95136 353 aa10.78□□□□□ -0.68
MCF2L-220ENST00000464800 IGKV1-13P0DP09 117 aa10.78□□□□□ -0.68
MCF2L-220ENST00000464800 RBMS2Q15434 407 aaKnown RBP10.78□□□□□ -0.68
MCF2L-220ENST00000464800 OR4A5Q8NH83 315 aa10.78□□□□□ -0.68
MCF2L-220ENST00000464800 C6orf62Q9GZU0 229 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-220ENST00000464800 TAS2R8Q9NYW2 309 aa10.78□□□□□ -0.68
MCF2L-220ENST00000464800 THYN1Q9P016 225 aa10.78□□□□□ -0.68
MCF2L-220ENST00000464800 FBXL17Q9UF56 701 aa10.78□□□□□ -0.68
MCF2L-220ENST00000464800 CGB1A6NKQ9 187 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 IFNA4P05014 189 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 PTBP1P26599 531 aaKnown RBP eCLIP10.77□□□□□ -0.69
MCF2L-220ENST00000464800 BRWD1-AS2P59051 145 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 NANOS2P60321 138 aaKnown RBP10.77□□□□□ -0.69
MCF2L-220ENST00000464800 PRR20EP86478 221 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 PRR20CP86479 221 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 PRR20DP86480 221 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 PRR20BP86481 221 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 PRR20AP86496 221 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 EIF4EBP1Q13541 118 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-220ENST00000464800 TIMM50Q3ZCQ8 353 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 CNIH2Q6PI25 160 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 MFSD4AQ8N468 514 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 OR5B3Q8NH48 314 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 C11orf45Q8TAV5 145 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 NUDCD2Q8WVJ2 157 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 CNBD2Q96M20 576 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 HRASLSQ9HDD0 168 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 BET1LQ9NYM9 111 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 BLOC1S6Q9UL45 172 aa10.77□□□□□ -0.69
MCF2L-220ENST00000464800 HECTD4Q9Y4D8 3996 aa10.76□□□□□ -0.69
MCF2L-220ENST00000464800 IGLC7A0M8Q6 106 aa10.76□□□□□ -0.69
MCF2L-220ENST00000464800 TMEM235A6NFC5 223 aa10.76□□□□□ -0.69
MCF2L-220ENST00000464800 OR2T8A6NH00 312 aa10.76□□□□□ -0.69
MCF2L-220ENST00000464800 NOTOA8MTQ0 251 aa10.76□□□□□ -0.69
MCF2L-220ENST00000464800 SSX5O60225 188 aa10.76□□□□□ -0.69
MCF2L-220ENST00000464800 RPA2P15927 270 aa10.76□□□□□ -0.69
MCF2L-220ENST00000464800 OR2B8PP59922 312 aa10.76□□□□□ -0.69
MCF2L-220ENST00000464800 ZNF66Q6ZN08 573 aa10.76□□□□□ -0.69
MCF2L-220ENST00000464800 CD300LFQ8TDQ1 290 aa10.76□□□□□ -0.69
MCF2L-220ENST00000464800 RARRES2Q99969 163 aa10.76□□□□□ -0.69
MCF2L-220ENST00000464800 AIFM2Q9BRQ8 373 aa10.76□□□□□ -0.69
MCF2L-220ENST00000464800 C11orf68Q9H3H3 251 aaKnown RBP10.76□□□□□ -0.69
MCF2L-220ENST00000464800 ANXA10Q9UJ72 324 aa10.76□□□□□ -0.69
MCF2L-220ENST00000464800 PCLOQ9Y6V0 5065 aa10.75□□□□□ -0.69
MCF2L-220ENST00000464800 MPTX1A8MV57 137 aa10.75□□□□□ -0.69
MCF2L-220ENST00000464800 CYB5BO43169 146 aa10.75□□□□□ -0.69
MCF2L-220ENST00000464800 TCTAP57738 103 aa10.75□□□□□ -0.69
MCF2L-220ENST00000464800 GNG2P59768 71 aa10.75□□□□□ -0.69
MCF2L-220ENST00000464800 APRG1Q8IVJ8 170 aa10.75□□□□□ -0.69
MCF2L-220ENST00000464800 VN1R17PQ8TDU5 208 aa10.75□□□□□ -0.69
MCF2L-220ENST00000464800 C2CD4CQ8TF44 421 aa10.75□□□□□ -0.69
MCF2L-220ENST00000464800 BSCL2Q96G97 398 aaPredicted RBP10.75□□□□□ -0.69
MCF2L-220ENST00000464800 GPHA2Q96T91 129 aa10.75□□□□□ -0.69
MCF2L-220ENST00000464800 SRSF8Q9BRL6 282 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms