RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 CCL20P78556 96 aa1.26□□□□□ -2.21
GARNL3-213ENST00000464616 OR2F1Q13607 317 aa1.26□□□□□ -2.21
GARNL3-213ENST00000464616 SPA17Q15506 151 aa1.26□□□□□ -2.21
GARNL3-213ENST00000464616 IBA57Q5T440 356 aaKnown RBP1.26□□□□□ -2.21
GARNL3-213ENST00000464616 SFXN4Q6P4A7 337 aa1.26□□□□□ -2.21
GARNL3-213ENST00000464616 SSX8Q7RTT4 187 aa1.26□□□□□ -2.21
GARNL3-213ENST00000464616 DEFB119Q8N690 84 aa1.26□□□□□ -2.21
GARNL3-213ENST00000464616 RNASE11Q8TAA1 199 aaKnown RBP1.26□□□□□ -2.21
GARNL3-213ENST00000464616 ANKRD7Q92527 254 aa1.26□□□□□ -2.21
GARNL3-213ENST00000464616 SLC35B4Q969S0 331 aa1.26□□□□□ -2.21
GARNL3-213ENST00000464616 CHST6Q9GZX3 395 aa1.26□□□□□ -2.21
GARNL3-213ENST00000464616 VCX3BQ9H321 246 aa1.26□□□□□ -2.21
GARNL3-213ENST00000464616 OR51I1Q9H343 314 aa1.26□□□□□ -2.21
GARNL3-213ENST00000464616 CXorf21Q9HAI6 301 aa1.26□□□□□ -2.21
GARNL3-213ENST00000464616 MPDZO75970 2070 aa1.26□□□□□ -2.21
GARNL3-213ENST00000464616 PTPRSQ13332 1948 aa1.26□□□□□ -2.21
GARNL3-213ENST00000464616 PLB1Q6P1J6 1458 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 MYO3BQ8WXR4 1341 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 TMSB15BA0A087X1C1 80 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 TRAV38-1A0A0B4J264 116 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 IGHV1-18A0A0C4DH31 117 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 A0A0G2JQZ4 141 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 EEF1E1-BLOC1S5C9J1V9 151 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 LST1O00453 97 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 SULT1A3P0DMM9 295 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 SULT1A4P0DMN0 295 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 CCL1P22362 96 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 PSMD8P48556 350 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 RPL18Q07020 188 aaKnown RBP1.25□□□□□ -2.21
GARNL3-213ENST00000464616 STX5Q13190 355 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 SYPL2Q5VXT5 272 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 LPCAT3Q6P1A2 487 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 RPL22L1Q6P5R6 122 aaKnown RBP1.25□□□□□ -2.21
GARNL3-213ENST00000464616 KTN1-AS1Q86SY8 53 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 TRAPPC5Q8IUR0 188 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 OR6V1Q8N148 313 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 OR1M1Q8NGA1 313 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 OR1L8Q8NGR8 309 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 MCFD2Q8NI22 146 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 CCDC42Q96M95 316 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 IMMP2LQ96T52 175 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 TIMM21Q9BVV7 248 aa1.25□□□□□ -2.21
GARNL3-213ENST00000464616 COL5A3P25940 1745 aaPredicted RBP1.24□□□□□ -2.21
GARNL3-213ENST00000464616 ARHGAP32A7KAX9 2087 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 TRBV20OR9-2A0A075B6H5 130 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 MDFIC2A0A1B0GVS7 189 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 PQLC2LA1A4F0 135 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 RFPL4AA6NLU0 287 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 HMSDA8MTL9 139 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 A8MUN3 132 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 FABP5P3A8MUU1 101 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 EVPLLA8MZ36 301 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 RFPL4AL1F8VTS6 287 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 I3L521 148 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 LEPROTO15243 131 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 IFNA10P01566 189 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 PRM2P04554 102 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 LGALS1P09382 135 aaKnown RBP1.24□□□□□ -2.21
GARNL3-213ENST00000464616 MAP2K4P45985 399 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 KRTAP12-1P59990 96 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 ACOT6Q3I5F7 207 aaPredicted RBP1.24□□□□□ -2.21
GARNL3-213ENST00000464616 ZNF791Q3KP31 576 aaPredicted RBP1.24□□□□□ -2.21
GARNL3-213ENST00000464616 PCOTHQ58A44 107 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 ZNF676Q8N7Q3 588 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 OR8J2Q8NGG1 315 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 RNASE6Q93091 150 aaKnown RBP1.24□□□□□ -2.21
GARNL3-213ENST00000464616 BORCS7Q96B45 105 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 ERMAPQ96PL5 475 aaPredicted RBP1.24□□□□□ -2.21
GARNL3-213ENST00000464616 ULBP3Q9BZM4 244 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 CYSTM1Q9H1C7 97 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 CST9LQ9H4G1 147 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 EFCAB1Q9HAE3 211 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 XPNPEP1Q9NQW7 623 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 SCN9AQ15858 1988 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 DISP1Q96F81 1524 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 SNAPC4Q5SXM2 1469 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 PCNX2A6NKB5 2137 aa1.24□□□□□ -2.21
GARNL3-213ENST00000464616 TRGV2A0A075B6R0 118 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 ZNF705FA8MVS1 300 aaPredicted RBP1.23□□□□□ -2.21
GARNL3-213ENST00000464616 HLA-DRB1P01911 266 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 PEBP1P30086 187 aaKnown RBP1.23□□□□□ -2.21
GARNL3-213ENST00000464616 AKR1C3P42330 323 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 REG1BP48304 166 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 EDDM3AQ14507 147 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 KRTAP13-4Q3LI77 160 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 Q6ZS49 121 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 LRRC28Q86X40 367 aaPredicted RBP1.23□□□□□ -2.21
GARNL3-213ENST00000464616 OR51T1Q8NGJ9 327 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 OR13C4Q8NGS5 318 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 C11orf40Q8WZ69 217 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 PPP1R14BQ96C90 147 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 CMSS1Q9BQ75 279 aaKnown RBP1.23□□□□□ -2.21
GARNL3-213ENST00000464616 UCK1Q9HA47 277 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 PAQR5Q9NXK6 330 aaPredicted RBP1.23□□□□□ -2.21
GARNL3-213ENST00000464616 NAT8Q9UHE5 227 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 FUT9Q9Y231 359 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 COQ4Q9Y3A0 265 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 PXDNLA1KZ92 1463 aa1.23□□□□□ -2.21
GARNL3-213ENST00000464616 DENND4BO75064 1496 aaPredicted RBP1.23□□□□□ -2.21
GARNL3-213ENST00000464616 MDC1Q14676 2089 aaKnown RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms