RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 MOB3AQ96BX8 217 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 SEC22CQ9BRL7 303 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 MRPL20Q9BYC9 149 aaKnown RBP2.83□□□□□ -1.96
SCFD1-204ENST00000463622 OR2D2Q9H210 308 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 TMEM133Q9H2Q1 129 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 RIMS4Q9H426 269 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-204ENST00000463622 SDHAF2Q9NX18 166 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 GNG12Q9UBI6 72 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 JPT1Q9UK76 154 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 IGHV4OR15-8A0A075B7B6 117 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 A0A0G2JRQ6 117 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 A0A0U1RQK1 487 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 A0A1W2PPI3 338 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 VGLL3A8MV65 326 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 J3QR06 171 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 M0R1W7 72 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 ARPC1BO15143 372 aaKnown RBP2.83□□□□□ -1.96
SCFD1-204ENST00000463622 SPINT2O43291 252 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 YPEL1O60688 119 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 ECDO95905 644 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-204ENST00000463622 IGKV1-39P01597 117 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 IGKV1D-39P04432 117 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 TCRBP04435 133 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 GZMHP20718 246 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 CNTFRP26992 372 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 RAB13P51153 203 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 SSBP1Q04837 148 aaKnown RBP2.83□□□□□ -1.96
SCFD1-204ENST00000463622 ARL6IP1Q15041 203 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 HLA-DRB5Q30154 266 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 SP6Q3SY56 376 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 Q3ZCU0 254 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 NCR3LG1Q68D85 454 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 C11orf88Q6PI97 169 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 LYG1Q8N1E2 194 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 CENPSQ8N2Z9 138 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 ZNF383Q8NA42 475 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 OR10J5Q8NHC4 309 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 ZNF596Q8TC21 504 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 GIMAP1Q8WWP7 306 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 GALMQ96C23 342 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 YPEL2Q96QA6 119 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 TP53RKQ96S44 253 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 B9D2Q9BPU9 175 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 GINS4Q9BRT9 223 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 SLC5A7Q9GZV3 580 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 C20orf85Q9H1P6 137 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 DPAGT1Q9H3H5 408 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 GAL3ST2Q9H3Q3 398 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 NUDT15Q9NV35 164 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 SLC2A8Q9NY64 477 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 TAS2R8Q9NYW2 309 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 KCNIP1Q9NZI2 227 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 GPR132Q9UNW8 380 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 OR2W1Q9Y3N9 320 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 HILPDAQ9Y5L2 63 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 KPTNQ9Y664 436 aa2.83□□□□□ -1.96
SCFD1-204ENST00000463622 DYNC2H1Q8NCM8 4307 aaKnown RBP2.82□□□□□ -1.96
SCFD1-204ENST00000463622 IGHV1-69DA0A0B4J2H0 117 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 WI2-2373I1.2A0A1W2PRP0 233 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 FUOMA2VDF0 154 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 SH2D7A6NKC9 451 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-204ENST00000463622 M0R1X1 148 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 PLXNB1O43157 2135 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 RAMP3O60896 148 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 PGLYRP1O75594 196 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-204ENST00000463622 IGHV1-69P01742 117 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 RLN1P04808 185 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 ARG1P05089 322 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 CT45A6P0DMU7 189 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 CT45A5P0DMU8 189 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 CT45A7P0DMV0 189 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 MYOD1P15172 320 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 RPA2P15927 270 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 ZBTB25P24278 435 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 KRTAP5-9P26371 169 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 SAA4P35542 130 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 TAS2R46P59540 309 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 TSPAN5P62079 268 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 PPP1R1AQ13522 171 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 ANKRD55Q3KP44 614 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 ZNF833PQ6ZTB9 187 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 TMED4Q7Z7H5 227 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 ZNF554Q86TJ5 538 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 ARRDC1Q8N5I2 433 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 OR11H6Q8NGC7 330 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 OR52M1Q8NGK5 317 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 OR6F1Q8NGZ6 308 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 TERB2Q8NHR7 220 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 PIFOQ8TCI5 191 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 CHPT1Q8WUD6 406 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 C15orf40Q8WUR7 153 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 NABP2Q9BQ15 211 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 CLEC7AQ9BXN2 247 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 METTL8Q9H825 291 aaKnown RBP2.82□□□□□ -1.96
SCFD1-204ENST00000463622 PALMDQ9NP74 551 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 SLC2A9Q9NRM0 540 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 RABL2AQ9UBK7 228 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-204ENST00000463622 ZNF107Q9UII5 783 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-204ENST00000463622 RABL2BQ9UNT1 228 aa2.82□□□□□ -1.96
SCFD1-204ENST00000463622 DOCK11Q5JSL3 2073 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms