RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 SLC35D1Q9NTN3 355 aa3.39□□□□□ -1.87
ERCC4-203ENST00000462862 TMEM140Q9NV12 185 aa3.39□□□□□ -1.87
ERCC4-203ENST00000462862 TMEM242Q9NWH2 141 aa3.39□□□□□ -1.87
ERCC4-203ENST00000462862 WASHC3Q9Y3C0 194 aa3.39□□□□□ -1.87
ERCC4-203ENST00000462862 CADP27708 2225 aa3.39□□□□□ -1.87
ERCC4-203ENST00000462862 ARID1AO14497 2285 aa3.39□□□□□ -1.87
ERCC4-203ENST00000462862 CHD3Q12873 2000 aaKnown RBP3.38□□□□□ -1.87
ERCC4-203ENST00000462862 USF3Q68DE3 2245 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 A0A0G2JRQ6 117 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 RBFOX3A6NFN3 312 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 LINC00473A8K010 186 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 C17orf98A8MV24 154 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 SEC14L6B5MCN3 397 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 FAM157AC9JC47 383 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 E7EQL1 145 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 J3QR06 171 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 PDE6DO43924 150 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 RAMP3O60896 148 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 CST7O76096 145 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 KBTBD11O94819 623 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 TMEM50AO95807 157 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 IFNA10P01566 189 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 SFTA3P0C7M3 94 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 METTL15P1P0C7V9 234 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 IGHV1-8P0DP01 117 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 BCL2P10415 239 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 FOLR2P14207 255 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 NFYBP25208 207 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 NPY1RP25929 384 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 GPR6P46095 362 aaPredicted RBP3.38□□□□□ -1.87
ERCC4-203ENST00000462862 RPL29P47914 159 aaKnown RBP3.38□□□□□ -1.87
ERCC4-203ENST00000462862 HOXA1P49639 335 aaPredicted RBP3.38□□□□□ -1.87
ERCC4-203ENST00000462862 TAS2R45P59539 299 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 SELENOTP62341 195 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 RPL30P62888 115 aaKnown RBP3.38□□□□□ -1.87
ERCC4-203ENST00000462862 ERHP84090 104 aaKnown RBP3.38□□□□□ -1.87
ERCC4-203ENST00000462862 ZNF816Q0VGE8 651 aaPredicted RBP3.38□□□□□ -1.87
ERCC4-203ENST00000462862 ZNF273Q14593 569 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 HLA-DRB5Q30154 266 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 RNF212Q495C1 297 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 SOHLH1Q5JUK2 328 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 SP5Q6BEB4 398 aaPredicted RBP3.38□□□□□ -1.87
ERCC4-203ENST00000462862 TEPPQ6URK8 271 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 TMEM182Q6ZP80 229 aaPredicted RBP3.38□□□□□ -1.87
ERCC4-203ENST00000462862 Q6ZRM9 215 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 THNSL2Q86YJ6 484 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 MMD2Q8IY49 270 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 LYG1Q8N1E2 194 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 TMEM217Q8N7C4 229 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 C15orf54Q8N8G6 183 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 ZNF114Q8NC26 417 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 SLC24A4Q8NFF2 622 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 RFESDQ8TAC1 157 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 TMEM167AQ8TBQ9 72 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 C22orf15Q8WYQ4 148 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 CCL17Q92583 94 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 LHX4Q969G2 390 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 CCL13Q99616 98 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 NIPSNAP3BQ9BS92 247 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 CLEC7AQ9BXN2 247 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 NPCDR1Q9BY65 106 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 SMIM3Q9BZL3 60 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 COMMD5Q9GZQ3 224 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 TMEM133Q9H2Q1 129 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 NARFLQ9H6Q4 476 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 WFDC1Q9HC57 220 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 HEYLQ9NQ87 328 aaPredicted RBP3.38□□□□□ -1.87
ERCC4-203ENST00000462862 VAX2Q9UIW0 290 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 TCF19Q9Y242 345 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 WDR83OSQ9Y284 106 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 CELSR3Q9NYQ7 3312 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 ZGRF1Q86YA3 2104 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 CACNA1DQ01668 2161 aa3.38□□□□□ -1.87
ERCC4-203ENST00000462862 CFAP46Q8IYW2 2715 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 ESPL1Q14674 2120 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 IGHV3OR15-7A0A075B7D8 119 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 IGHV3-43A0A0B4J1X8 118 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 TRAV39A0A0B4J263 110 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 UBE2L5PA0A1B0GUS4 154 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 A0A1W2PPV4 95 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 MAP1LC3B2A6NCE7 125 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 FAM90A27PA6NNH2 459 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 C15orf62A8K5M9 175 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 PMS2P5A8MQ11 134 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 DEFB108AA8MXU0 73 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 F6UZH7 168 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 H0YJW9 148 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 UPK2O00526 184 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 DVL1O14640 695 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 ENSAO43768 121 aaKnown RBP3.37□□□□□ -1.87
ERCC4-203ENST00000462862 VENTXO95231 258 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 CXorf1O96002 111 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 MT-ND4LP03901 98 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 FABP1P07148 127 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 IGHV3-43DP0DP04 118 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 IAPPP10997 89 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 CD99P14209 185 aa3.37□□□□□ -1.87
ERCC4-203ENST00000462862 LOXP28300 417 aaPredicted RBP3.37□□□□□ -1.87
ERCC4-203ENST00000462862 VDAC2P45880 294 aaPredicted RBP3.37□□□□□ -1.87
ERCC4-203ENST00000462862 FHITP49789 147 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms