RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 MC5RP33032 325 aa13.38□□□□□ -0.27
SMC4-204ENST00000462787 TIMP3P35625 211 aa13.38□□□□□ -0.27
SMC4-204ENST00000462787 STPG1Q5TH74 334 aa13.38□□□□□ -0.27
SMC4-204ENST00000462787 NEUROG1Q92886 237 aa13.38□□□□□ -0.27
SMC4-204ENST00000462787 ONECUT1Q9UBC0 465 aa13.38□□□□□ -0.27
SMC4-204ENST00000462787 SLC25A10Q9UBX3 287 aaPredicted RBP13.38□□□□□ -0.27
SMC4-204ENST00000462787 TMEM30BQ3MIR4 351 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 KRTCAP3Q53RY4 240 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 DNM1P46Q6ZS02 220 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 ASCL5Q7RTU5 278 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 CACNA1IQ9P0X4 2223 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 C17orf98A8MV24 154 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 COX7A1P24310 79 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 GNB2P62879 340 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 SEC11AP67812 179 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 RELQ04864 619 aaPredicted RBP13.37□□□□□ -0.27
SMC4-204ENST00000462787 TMEM256Q8N2U0 113 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 C20orf144Q9BQM9 153 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 C1QTNF5Q9BXJ0 243 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 ZNF319Q9P2F9 582 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 A0A1B0GW15 77 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 H3BUT2 72 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 SPANXN1Q5VSR9 72 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 ZNF826PQ6ZT77 177 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 LINC01551Q86U37 167 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 INSIG2Q9Y5U4 225 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 M0R3E3 92 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 FAM90A2PQ658T7 463 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 ZNF714Q96N38 554 aa13.37□□□□□ -0.27
SMC4-204ENST00000462787 LINC00271P0C7V0 271 aa13.36□□□□□ -0.27
SMC4-204ENST00000462787 CCL4P13236 92 aa13.36□□□□□ -0.27
SMC4-204ENST00000462787 NRN1LQ496H8 165 aa13.36□□□□□ -0.27
SMC4-204ENST00000462787 SNHG12Q9BXW3 62 aa13.36□□□□□ -0.27
SMC4-204ENST00000462787 LINC00470Q9BZP3 86 aa13.36□□□□□ -0.27
SMC4-204ENST00000462787 RPP21Q9H633 154 aaKnown RBP13.36□□□□□ -0.27
SMC4-204ENST00000462787 C12orf77C9JDV5 145 aa13.36□□□□□ -0.27
SMC4-204ENST00000462787 APOHP02749 345 aaPredicted RBP13.36□□□□□ -0.27
SMC4-204ENST00000462787 IL4P05112 153 aa13.36□□□□□ -0.27
SMC4-204ENST00000462787 MEGF9Q9H1U4 602 aa13.36□□□□□ -0.27
SMC4-204ENST00000462787 ZNF256Q9Y2P7 627 aaPredicted RBP13.36□□□□□ -0.27
SMC4-204ENST00000462787 SPSB3Q6PJ21 355 aa13.36□□□□□ -0.27
SMC4-204ENST00000462787 OR4X2Q8NGF9 303 aa13.36□□□□□ -0.27
SMC4-204ENST00000462787 ZNF703Q9H7S9 590 aaPredicted RBP13.36□□□□□ -0.27
SMC4-204ENST00000462787 ZIC3O60481 467 aa13.36□□□□□ -0.27
SMC4-204ENST00000462787 IGFBP2P18065 325 aa13.36□□□□□ -0.27
SMC4-204ENST00000462787 NUDT10Q8NFP7 164 aa13.36□□□□□ -0.27
SMC4-204ENST00000462787 ZNF502Q8TBZ5 544 aa13.36□□□□□ -0.27
SMC4-204ENST00000462787 WDR83OSQ9Y284 106 aa13.36□□□□□ -0.27
SMC4-204ENST00000462787 BRCA1P38398 1863 aaKnown RBP13.35□□□□□ -0.27
SMC4-204ENST00000462787 TRAV30A0A087WSZ9 112 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 CELA2AP08217 269 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 RSPO4Q2I0M5 234 aaPredicted RBP13.35□□□□□ -0.27
SMC4-204ENST00000462787 NMSQ5H8A3 153 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 VKORC1L1Q8N0U8 176 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 REPIN1Q9BWE0 567 aaKnown RBP13.35□□□□□ -0.27
SMC4-204ENST00000462787 ELOVL5Q9NYP7 299 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 SCN10AQ9Y5Y9 1956 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 C7orf71A4D174 169 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 TTC9CQ8N5M4 171 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 FLVCR1-AS1Q8TAF5 88 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 RNASE7Q9H1E1 156 aaKnown RBP13.35□□□□□ -0.27
SMC4-204ENST00000462787 GOSR1O95249 250 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 TTTY12Q9BZ98 90 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 ZNF257Q9Y2Q1 563 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 MIR17HGQ75NE6 70 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 PLPPR1Q8TBJ4 325 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 MS4A6AQ9H2W1 248 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 VCX2Q9H322 139 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 IDI2-AS1Q9NZ38 188 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 GREB1Q4ZG55 1949 aa13.35□□□□□ -0.27
SMC4-204ENST00000462787 IGHV3-21A0A0B4J1V1 117 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 SNAI2O43623 268 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 GPR6P46095 362 aaPredicted RBP13.34□□□□□ -0.27
SMC4-204ENST00000462787 TMEM171Q8WVE6 324 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 IFI27L2Q9H2X8 130 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 A0A1B0GUT8 65 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 COX6CP09669 75 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 UNQ5815/PRO19632Q6UWF5 114 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 OR1N2Q8NGR9 330 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 PGPEP1LA6NFU8 196 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 HIGD1CA8MV81 97 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 IFNL4K9M1U5 179 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 REG1BP48304 166 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 RBPMS2Q6ZRY4 209 aaKnown RBP13.34□□□□□ -0.27
SMC4-204ENST00000462787 CHCHD1Q96BP2 118 aaKnown RBP13.34□□□□□ -0.27
SMC4-204ENST00000462787 SGK494Q96LW2 274 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 SIGMAR1Q99720 223 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 POLR2AP24928 1970 aaKnown RBP13.34□□□□□ -0.27
SMC4-204ENST00000462787 A0A1B0GWB2 263 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 PPIAL4DF5H284 164 aa13.34□□□□□ -0.27
SMC4-204ENST00000462787 RPP25LQ8N5L8 163 aaKnown RBP13.34□□□□□ -0.27
SMC4-204ENST00000462787 GAGE1Q13065 139 aa13.33□□□□□ -0.27
SMC4-204ENST00000462787 NPIPB3Q92617 1050 aa13.33□□□□□ -0.27
SMC4-204ENST00000462787 RP1P56715 2156 aa13.33□□□□□ -0.28
SMC4-204ENST00000462787 RBFOX2O43251 390 aaKnown RBP eCLIP13.33□□□□□ -0.283e-8■■■■■ 54.1
SMC4-204ENST00000462787 ZNHIT1O43257 154 aa13.33□□□□□ -0.28
SMC4-204ENST00000462787 CD55P08174 381 aa13.33□□□□□ -0.28
SMC4-204ENST00000462787 OR2K2Q8NGT1 345 aa13.33□□□□□ -0.28
SMC4-204ENST00000462787 CRISPLD2Q9H0B8 497 aa13.33□□□□□ -0.28
SMC4-204ENST00000462787 FNDC4Q9H6D8 234 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms