RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 OR10C1Q96KK4 312 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 ZNF48Q96MX3 618 aaPredicted RBP8.51□□□□□ -1.05
RTF1-202ENST00000462276 FBXL15Q9H469 300 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 GSX1Q9H4S2 264 aaPredicted RBP8.51□□□□□ -1.05
RTF1-202ENST00000462276 GSKIPQ9P0R6 139 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 SOX21Q9Y651 276 aaPredicted RBP8.51□□□□□ -1.05
RTF1-202ENST00000462276 hCG_2014768A0A024R1R8 64 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 A0A0G2JRQ6 117 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 INAFM1C9JVW0 142 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 INS-IGF2F8WCM5 200 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 HOXA3O43365 443 aaPredicted RBP8.5□□□□□ -1.05
RTF1-202ENST00000462276 CCNKO75909 580 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 IFNA17P01571 189 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 OR9G9P0C7N8 305 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 NKX2-1P43699 371 aaPredicted RBP8.5□□□□□ -1.05
RTF1-202ENST00000462276 TNFRSF9Q07011 255 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 C2orf68Q2NKX9 166 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 KRTAP21-3Q3LHN1 58 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 AKAP14Q86UN6 197 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 C5orf56Q8N8D9 126 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 OR4D5Q8NGN0 318 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 TMEM68Q96MH6 324 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 CIB3Q96Q77 187 aaPredicted RBP8.5□□□□□ -1.05
RTF1-202ENST00000462276 CLCC1Q96S66 551 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 NPFFR1Q9GZQ6 430 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 ZNF430Q9H8G1 570 aaPredicted RBP8.5□□□□□ -1.05
RTF1-202ENST00000462276 HSPB7Q9UBY9 170 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 OR51B2Q9Y5P1 312 aa8.5□□□□□ -1.05
RTF1-202ENST00000462276 MDFIC2A0A1B0GVS7 189 aa8.49□□□□□ -1.05
RTF1-202ENST00000462276 A0A1W2PN81 502 aa8.49□□□□□ -1.05
RTF1-202ENST00000462276 MPTX1A8MV57 137 aa8.49□□□□□ -1.05
RTF1-202ENST00000462276 WRBO00258 174 aa8.49□□□□□ -1.05
RTF1-202ENST00000462276 CCSO14618 274 aa8.49□□□□□ -1.05
RTF1-202ENST00000462276 KCNAB3O43448 404 aa8.49□□□□□ -1.05
RTF1-202ENST00000462276 CNIH1O95406 144 aa8.49□□□□□ -1.05
RTF1-202ENST00000462276 PVALBP20472 110 aaPredicted RBP8.49□□□□□ -1.05
RTF1-202ENST00000462276 CNTFRP26992 372 aa8.49□□□□□ -1.05
RTF1-202ENST00000462276 PSMB6P28072 239 aa8.49□□□□□ -1.05
RTF1-202ENST00000462276 CHRNA7P36544 502 aa8.49□□□□□ -1.05
RTF1-202ENST00000462276 COMPP49747 757 aaPredicted RBP8.49□□□□□ -1.05
RTF1-202ENST00000462276 TAS2R30P59541 319 aa8.49□□□□□ -1.05
RTF1-202ENST00000462276 HILS1P60008 231 aa8.49□□□□□ -1.05
RTF1-202ENST00000462276 TCTE3Q8IZS6 198 aa8.49□□□□□ -1.05
RTF1-202ENST00000462276 RAB40CQ96S21 281 aa8.49□□□□□ -1.05
RTF1-202ENST00000462276 QTRT1Q9BXR0 403 aaKnown RBP8.49□□□□□ -1.05
RTF1-202ENST00000462276 ZNF580Q9UK33 172 aa8.49□□□□□ -1.05
RTF1-202ENST00000462276 NIPBLQ6KC79 2804 aaeCLIP8.48□□□□□ -1.05
RTF1-202ENST00000462276 NSD1Q96L73 2696 aaPredicted RBP8.48□□□□□ -1.05
RTF1-202ENST00000462276 TRAV3A0A0B4J244 114 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 TEX50A0A1B0GTY4 177 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 SYNGR2O43760 224 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 GPR137BO60478 399 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 PFDN1O60925 122 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 TSPAN9O75954 239 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 SIX6O95475 246 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 RPL27AP46776 148 aaKnown RBP8.48□□□□□ -1.05
RTF1-202ENST00000462276 OR2B8PP59922 312 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 RPP30P78346 268 aaKnown RBP8.48□□□□□ -1.05
RTF1-202ENST00000462276 CX3CL1P78423 397 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 PRCDQ00LT1 54 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 CD83Q01151 205 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 TMEM267Q0VDI3 215 aaPredicted RBP8.48□□□□□ -1.05
RTF1-202ENST00000462276 FXYD3Q14802 87 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 LY6EQ16553 131 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 IZUMO4Q1ZYL8 232 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 CXorf66Q5JRM2 361 aaPredicted RBP8.48□□□□□ -1.05
RTF1-202ENST00000462276 NOXA1Q86UR1 476 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 TMEM219Q86XT9 240 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 OR2T35Q8NGX2 323 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 PPP1R1CQ8WVI7 109 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 CHIAQ9BZP6 476 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 HIPK2Q9H2X6 1198 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 ENY2Q9NPA8 101 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 NDUFA4L2Q9NRX3 87 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 NSG2Q9Y328 171 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 SVEP1Q4LDE5 3571 aa8.48□□□□□ -1.05
RTF1-202ENST00000462276 CEBPZOSA8MTT3 80 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 TRIM77I1YAP6 450 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 FCN1O00602 326 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 SCAF4O95104 1147 aaKnown RBP8.47□□□□□ -1.05
RTF1-202ENST00000462276 CA2P00918 260 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 MBPP02686 304 aaPredicted RBP8.47□□□□□ -1.05
RTF1-202ENST00000462276 AMY1AP04745 511 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 RNASE1P07998 156 aaKnown RBP8.47□□□□□ -1.05
RTF1-202ENST00000462276 ERHP84090 104 aaKnown RBP8.47□□□□□ -1.05
RTF1-202ENST00000462276 PJVKQ0ZLH3 352 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 TNXAQ16473 311 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 MRGPRG-AS1Q2M3A8 158 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 Q71RC1 249 aaPredicted RBP8.47□□□□□ -1.05
RTF1-202ENST00000462276 OR1L6Q8NGR2 347 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 THAP6Q8TBB0 222 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 ARPC1AQ92747 370 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 PPP1R14BQ96C90 147 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 ST6GAL2Q96JF0 529 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 PRSS22Q9GZN4 317 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 PLEKHA3Q9HB20 300 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 WSB1Q9Y6I7 421 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 U3KQ87 197 aa8.47□□□□□ -1.05
RTF1-202ENST00000462276 IGHV7-81A0A0B4J1V7 117 aa8.46□□□□□ -1.06
RTF1-202ENST00000462276 DNAJC9-AS1A6NH13 148 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms