RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 IGHV2-70DA0A0C4DH43 119 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 TRBV5-5A0A0J9YX44 114 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 A0A1B0GW64 132 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 FAM230AA0A1W2PPH8 454 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 OR5B21A6NL26 309 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 B4DEV8 164 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 IFNL4K9M1U5 179 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 M0R036 132 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 XRCC3O43542 346 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 SOX15O60248 233 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 HIST1H2BKO60814 126 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 MMP23AO75900 390 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 HPRT1P00492 218 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 HIST1H2BJP06899 126 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 LIPFP07098 398 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 TMEM225BP0DP42 221 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 HIST1H2BOP23527 126 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 GATA3P23771 443 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 CDK2P24941 298 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 HIST1H2BBP33778 126 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 SNCAP37840 140 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 SOX2P48431 317 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 GPM6AP51674 278 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 HIST1H2BDP58876 126 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 TAS2R20P59543 309 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 RAB11AP62491 216 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 HIST1H2BCP62807 126 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 GNG3P63215 75 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 HIST2H2BEQ16778 126 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 OCIAD2Q56VL3 154 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 C5orf24Q7Z6I8 188 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 FAM24BQ8N5W8 94 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 BOLLQ8N9W6 283 aaKnown RBP4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 LFNGQ8NES3 379 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 OR5A2Q8NGI9 324 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 OR51A4Q8NGJ6 313 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 OR5D14Q8NGL3 314 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 OR13C5Q8NGS8 318 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 TNFAIP8L1Q8WVP5 186 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 PP6455Q8WZ26 134 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 RAB1CQ92928 201 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 HIST1H2BHQ93079 126 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 ERGIC1Q969X5 290 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 CPNE2Q96FN4 548 aaPredicted RBP4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 YPEL4Q96NS1 127 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 HIST1H2BNQ99877 126 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 HIST1H2BMQ99879 126 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 SLC25A21Q9BQT8 299 aaPredicted RBP4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 FAAP24Q9BTP7 215 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 ZNF665Q9H7R5 613 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 TMEM106BQ9NUM4 274 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 NECAP2Q9NVZ3 263 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 C1orf123Q9NWV4 160 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 OR5AC2Q9NZP5 309 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 CKLFQ9UBR5 152 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 AK6Q9Y3D8 172 aaKnown RBP4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 V9GY05 133 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 RYR2Q92736 4967 aa4.91□□□□□ -1.62
SMARCC1-204ENST00000462198 TET2Q6N021 2002 aaPredicted RBP4.9□□□□□ -1.62
SMARCC1-204ENST00000462198 TRBV5-7A0A0A0MS05 114 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 A0A1W2PPK0 400 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 TRAPPC2LH3BP13 241 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 TAAR5O14804 337 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 HOXA3O43365 443 aaPredicted RBP4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 ZNF735P0CB33 412 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 CHATP28329 748 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 AKR1C3P42330 323 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 FUT6P51993 359 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 ELLP55199 621 aaPredicted RBP4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 ZNF154Q13106 437 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 TMEM183BQ1AE95 376 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 Q499Y3 187 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 DEFB121Q5J5C9 76 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 KLF17Q5JT82 389 aaPredicted RBP4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 TMEM69Q5SWH9 247 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 TMEM42Q69YG0 159 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 PRR27Q6MZM9 219 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 STEAP1BQ6NZ63 245 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 ZNF826PQ6ZT77 177 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 SLC25A26Q70HW3 274 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 LYG2Q86SG7 212 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 WDR86Q86TI4 376 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 IZUMO1Q8IYV9 350 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 SELENOHQ8IZQ5 122 aaKnown RBP4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 CCDC71LQ8N9Z2 235 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 SCCPDHQ8NBX0 429 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 OR52B4Q8NGK2 314 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 OR4C16Q8NGL9 310 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 OR13C9Q8NGT0 318 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 OR4S2Q8NH73 311 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 ZNF596Q8TC21 504 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 LRRC29Q8WV35 223 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 TMEM106AQ96A25 262 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 MRGPRFQ96AM1 343 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 SPSB1Q96BD6 273 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 MOB3AQ96BX8 217 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 BORCS8Q96FH0 119 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 SELENOIQ9C0D9 397 aa4.9□□□□□ -1.63
SMARCC1-204ENST00000462198 OR51I2Q9H344 312 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms