RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 HMX3A6NHT5 357 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 FAM223BA6NKX1 122 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 NPIPB5A8MRT5 1133 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 H3BMQ9 156 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 GABARAPH6UMI1 98 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 UPK2O00526 184 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 S1PR2O95136 353 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 ZNF45Q02386 682 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 SSBP1Q04837 148 aaKnown RBP14.12□□□□□ -0.15
COL9A2-205ENST00000461118 KLK9Q2XQG4 91 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 ZNF585BQ52M93 769 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 CASC10Q5T4H9 136 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 ZNF429Q86V71 674 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 FAM223AQ8IWN6 122 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 SLC38A6Q8IZM9 456 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 ARRDC1Q8N5I2 433 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 ISOC1Q96CN7 298 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 ASCL2Q99929 193 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 HRASLSQ9HDD0 168 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 RABL2AQ9UBK7 228 aaPredicted RBP14.12□□□□□ -0.15
COL9A2-205ENST00000461118 KLK9Q9UKQ9 250 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 RABL2BQ9UNT1 228 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 ZNF257Q9Y2Q1 563 aa14.12□□□□□ -0.15
COL9A2-205ENST00000461118 DNAH1Q9P2D7 4330 aa14.11□□□□□ -0.15
COL9A2-205ENST00000461118 SORL1Q92673 2214 aa14.11□□□□□ -0.15
COL9A2-205ENST00000461118 CSMD3Q7Z407 3707 aa14.11□□□□□ -0.15
COL9A2-205ENST00000461118 M0QYG6 137 aa14.11□□□□□ -0.15
COL9A2-205ENST00000461118 NOL3O60936 208 aaKnown RBP14.11□□□□□ -0.15
COL9A2-205ENST00000461118 CD3DP04234 171 aa14.11□□□□□ -0.15
COL9A2-205ENST00000461118 IFNA6P05013 189 aa14.11□□□□□ -0.15
COL9A2-205ENST00000461118 CRYGCP07315 174 aa14.11□□□□□ -0.15
COL9A2-205ENST00000461118 ZP3P21754 424 aa14.11□□□□□ -0.15
COL9A2-205ENST00000461118 S100GP29377 79 aa14.11□□□□□ -0.15
COL9A2-205ENST00000461118 RNASE10Q5GAN6 216 aaKnown RBP14.11□□□□□ -0.15
COL9A2-205ENST00000461118 ACSM6Q6P461 480 aa14.11□□□□□ -0.15
COL9A2-205ENST00000461118 LHFPL1Q86WI0 220 aa14.11□□□□□ -0.15
COL9A2-205ENST00000461118 TMEM229BQ8NBD8 167 aa14.11□□□□□ -0.15
COL9A2-205ENST00000461118 NECAP1Q8NC96 275 aa14.11□□□□□ -0.15
COL9A2-205ENST00000461118 FYTTD1Q96QD9 318 aaKnown RBP14.11□□□□□ -0.15
COL9A2-205ENST00000461118 SLIRPQ9GZT3 109 aaKnown RBP14.11□□□□□ -0.15
COL9A2-205ENST00000461118 AKIP1Q9NQ31 210 aa14.11□□□□□ -0.15
COL9A2-205ENST00000461118 TMEM140Q9NV12 185 aa14.11□□□□□ -0.15
COL9A2-205ENST00000461118 PEF1Q9UBV8 284 aaKnown RBP14.11□□□□□ -0.15
COL9A2-205ENST00000461118 TRAV3A0A0B4J244 114 aa14.1□□□□□ -0.15
COL9A2-205ENST00000461118 CGB1A6NKQ9 187 aa14.1□□□□□ -0.15
COL9A2-205ENST00000461118 MARCH11A6NNE9 402 aa14.1□□□□□ -0.15
COL9A2-205ENST00000461118 PRH1P02810 166 aa14.1□□□□□ -0.15
COL9A2-205ENST00000461118 CD74P04233 296 aa14.1□□□□□ -0.15
COL9A2-205ENST00000461118 LPAR6P43657 344 aa14.1□□□□□ -0.15
COL9A2-205ENST00000461118 OR2B8PP59922 312 aa14.1□□□□□ -0.15
COL9A2-205ENST00000461118 RHOGP84095 191 aa14.1□□□□□ -0.15
COL9A2-205ENST00000461118 RNASE12Q5GAN4 147 aaKnown RBP14.1□□□□□ -0.15
COL9A2-205ENST00000461118 DMBX1Q8NFW5 382 aa14.1□□□□□ -0.15
COL9A2-205ENST00000461118 DIRAS2Q96HU8 199 aa14.1□□□□□ -0.15
COL9A2-205ENST00000461118 CEPT1Q9Y6K0 416 aa14.1□□□□□ -0.15
COL9A2-205ENST00000461118 ANKRD34BA5PLL1 514 aa14.09□□□□□ -0.15
COL9A2-205ENST00000461118 DPPA5A6NC42 116 aa14.09□□□□□ -0.15
COL9A2-205ENST00000461118 CTDSPLO15194 276 aa14.09□□□□□ -0.15
COL9A2-205ENST00000461118 MYOD1P15172 320 aa14.09□□□□□ -0.15
COL9A2-205ENST00000461118 CTRB1P17538 263 aa14.09□□□□□ -0.15
COL9A2-205ENST00000461118 PSMB6P28072 239 aa14.09□□□□□ -0.15
COL9A2-205ENST00000461118 TAS2R19P59542 299 aa14.09□□□□□ -0.15
COL9A2-205ENST00000461118 ERVK-16P61578 105 aa14.09□□□□□ -0.15
COL9A2-205ENST00000461118 DEFA5Q01523 94 aa14.09□□□□□ -0.15
COL9A2-205ENST00000461118 ATP5G2Q06055 141 aa14.09□□□□□ -0.15
COL9A2-205ENST00000461118 KLF5Q13887 457 aaPredicted RBP14.09□□□□□ -0.15
COL9A2-205ENST00000461118 PHLDA2Q53GA4 152 aa14.09□□□□□ -0.15
COL9A2-205ENST00000461118 CTRB2Q6GPI1 263 aa14.09□□□□□ -0.15
COL9A2-205ENST00000461118 TBC1D26Q86UD7 250 aa14.09□□□□□ -0.15
COL9A2-205ENST00000461118 SMIM4Q8WVI0 70 aa14.09□□□□□ -0.15
COL9A2-205ENST00000461118 ZNF486Q96H40 463 aaPredicted RBP14.09□□□□□ -0.15
COL9A2-205ENST00000461118 SRSF8Q9BRL6 282 aaKnown RBP14.09□□□□□ -0.15
COL9A2-205ENST00000461118 COMMD5Q9GZQ3 224 aa14.09□□□□□ -0.15
COL9A2-205ENST00000461118 NXF2Q9GZY0 626 aaKnown RBP14.09□□□□□ -0.15
COL9A2-205ENST00000461118 SAP30O75446 220 aa14.08□□□□□ -0.16
COL9A2-205ENST00000461118 DHFRP00374 187 aa14.08□□□□□ -0.16
COL9A2-205ENST00000461118 AREGP15514 252 aa14.08□□□□□ -0.16
COL9A2-205ENST00000461118 PTBP1P26599 531 aaKnown RBP eCLIP14.08□□□□□ -0.16
COL9A2-205ENST00000461118 RND3P61587 244 aa14.08□□□□□ -0.16
COL9A2-205ENST00000461118 FAM209BQ5JX69 171 aa14.08□□□□□ -0.16
COL9A2-205ENST00000461118 MUC7Q8TAX7 377 aa14.08□□□□□ -0.16
COL9A2-205ENST00000461118 FANCD2OSQ96PS1 177 aa14.08□□□□□ -0.16
COL9A2-205ENST00000461118 STARD9Q9P2P6 4700 aa14.08□□□□□ -0.16
COL9A2-205ENST00000461118 KRASP01116 189 aa14.07□□□□□ -0.16
COL9A2-205ENST00000461118 TRBV12-3P01733 135 aa14.07□□□□□ -0.16
COL9A2-205ENST00000461118 ECI1P42126 302 aa14.07□□□□□ -0.16
COL9A2-205ENST00000461118 THOC7Q6I9Y2 204 aaKnown RBP14.07□□□□□ -0.16
COL9A2-205ENST00000461118 STEAP1BQ6NZ63 245 aa14.07□□□□□ -0.16
COL9A2-205ENST00000461118 OR4D10Q8NGI6 311 aa14.07□□□□□ -0.16
COL9A2-205ENST00000461118 TERB2Q8NHR7 220 aa14.07□□□□□ -0.16
COL9A2-205ENST00000461118 C6orf62Q9GZU0 229 aaPredicted RBP14.07□□□□□ -0.16
COL9A2-205ENST00000461118 GAR1Q9NY12 217 aaKnown RBP14.07□□□□□ -0.16
COL9A2-205ENST00000461118 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.06□□□□□ -0.16
COL9A2-205ENST00000461118 IGLC7A0M8Q6 106 aa14.06□□□□□ -0.16
COL9A2-205ENST00000461118 OR2J3O76001 311 aa14.06□□□□□ -0.16
COL9A2-205ENST00000461118 RAB3DO95716 219 aa14.06□□□□□ -0.16
COL9A2-205ENST00000461118 RPA2P15927 270 aa14.06□□□□□ -0.16
COL9A2-205ENST00000461118 HIST1H1BP16401 226 aaKnown RBP14.06□□□□□ -0.16
COL9A2-205ENST00000461118 EXOSC2Q13868 293 aaKnown RBP14.06□□□□□ -0.16
COL9A2-205ENST00000461118 IL18Q14116 193 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms