RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 SLC2A8Q9NY64 477 aa16.92■□□□□ 0.3
SSNA1-202ENST00000459860 H0Y980 276 aa16.91■□□□□ 0.3
SSNA1-202ENST00000459860 UPK2O00526 184 aa16.91■□□□□ 0.3
SSNA1-202ENST00000459860 FGF2P09038 288 aa16.91■□□□□ 0.3
SSNA1-202ENST00000459860 INPP1P49441 399 aa16.91■□□□□ 0.3
SSNA1-202ENST00000459860 RAB25P57735 213 aa16.91■□□□□ 0.3
SSNA1-202ENST00000459860 DEFB136Q30KP8 78 aa16.91■□□□□ 0.3
SSNA1-202ENST00000459860 TRIM63Q969Q1 353 aa16.91■□□□□ 0.3
SSNA1-202ENST00000459860 SCGB3A2Q96PL1 93 aa16.91■□□□□ 0.3
SSNA1-202ENST00000459860 OR5B12Q96R08 314 aa16.91■□□□□ 0.3
SSNA1-202ENST00000459860 GNB4Q9HAV0 340 aa16.91■□□□□ 0.3
SSNA1-202ENST00000459860 A0A0G2JLM5 398 aa16.9■□□□□ 0.3
SSNA1-202ENST00000459860 SNAPC5O75971 98 aa16.9■□□□□ 0.3
SSNA1-202ENST00000459860 G6PCP35575 357 aa16.9■□□□□ 0.3
SSNA1-202ENST00000459860 RUNX1Q01196 453 aa16.9■□□□□ 0.3
SSNA1-202ENST00000459860 MRPL41Q8IXM3 137 aaKnown RBP16.9■□□□□ 0.3
SSNA1-202ENST00000459860 LINC00482Q8N8I6 264 aa16.9■□□□□ 0.3
SSNA1-202ENST00000459860 DEDD2Q8WXF8 326 aa16.9■□□□□ 0.3
SSNA1-202ENST00000459860 DUX3Q96PT4 197 aa16.9■□□□□ 0.3
SSNA1-202ENST00000459860 P2RX4Q99571 388 aa16.9■□□□□ 0.3
SSNA1-202ENST00000459860 TSC22D3Q99576 134 aa16.9■□□□□ 0.3
SSNA1-202ENST00000459860 C3orf85A0A1B0GTC6 90 aa16.89■□□□□ 0.29
SSNA1-202ENST00000459860 C13orf42A0A1B0GVH6 325 aa16.89■□□□□ 0.29
SSNA1-202ENST00000459860 B3GALNT1O75752 331 aa16.89■□□□□ 0.29
SSNA1-202ENST00000459860 ATG12O94817 140 aa16.89■□□□□ 0.29
SSNA1-202ENST00000459860 BRI3O95415 125 aa16.89■□□□□ 0.29
SSNA1-202ENST00000459860 LGALS1P09382 135 aaKnown RBP16.89■□□□□ 0.29
SSNA1-202ENST00000459860 KLF9Q13886 244 aaPredicted RBP16.89■□□□□ 0.29
SSNA1-202ENST00000459860 KIAA0141Q14154 515 aaPredicted RBP16.89■□□□□ 0.29
SSNA1-202ENST00000459860 TRIQKQ629K1 86 aa16.89■□□□□ 0.29
SSNA1-202ENST00000459860 CADM3Q8N126 398 aa16.89■□□□□ 0.29
SSNA1-202ENST00000459860 ADAD2Q8NCV1 583 aaKnown RBP16.89■□□□□ 0.29
SSNA1-202ENST00000459860 WFDC9Q8NEX5 89 aa16.89■□□□□ 0.29
SSNA1-202ENST00000459860 OR11H1Q8NG94 326 aa16.89■□□□□ 0.29
SSNA1-202ENST00000459860 DPF1Q92782 380 aa16.89■□□□□ 0.29
SSNA1-202ENST00000459860 RCC1LQ96I51 464 aaKnown RBP16.89■□□□□ 0.29
SSNA1-202ENST00000459860 SRRQ9GZT4 340 aa16.89■□□□□ 0.29
SSNA1-202ENST00000459860 TEX13DA0A0J9YY54 714 aaPredicted RBP16.88■□□□□ 0.29
SSNA1-202ENST00000459860 HMX3A6NHT5 357 aa16.88■□□□□ 0.29
SSNA1-202ENST00000459860 TEX22C9J3V5 150 aa16.88■□□□□ 0.29
SSNA1-202ENST00000459860 I3L521 148 aa16.88■□□□□ 0.29
SSNA1-202ENST00000459860 DUS4LO95620 317 aaKnown RBP16.88■□□□□ 0.29
SSNA1-202ENST00000459860 TRIM16LQ309B1 348 aa16.88■□□□□ 0.29
SSNA1-202ENST00000459860 ZNF57Q68EA5 555 aaPredicted RBP16.88■□□□□ 0.29
SSNA1-202ENST00000459860 THOC7Q6I9Y2 204 aaKnown RBP16.88■□□□□ 0.29
SSNA1-202ENST00000459860 H2BFWTQ7Z2G1 175 aa16.88■□□□□ 0.29
SSNA1-202ENST00000459860 TTC9CQ8N5M4 171 aa16.88■□□□□ 0.29
SSNA1-202ENST00000459860 GDPD1Q8N9F7 314 aa16.88■□□□□ 0.29
SSNA1-202ENST00000459860 OR1N2Q8NGR9 330 aa16.88■□□□□ 0.29
SSNA1-202ENST00000459860 MRGPRFQ96AM1 343 aa16.88■□□□□ 0.29
SSNA1-202ENST00000459860 ZNF257Q9Y2Q1 563 aa16.88■□□□□ 0.29
SSNA1-202ENST00000459860 TRAV3A0A0B4J244 114 aa16.87■□□□□ 0.29
SSNA1-202ENST00000459860 DHFRP00374 187 aa16.87■□□□□ 0.29
SSNA1-202ENST00000459860 IGHV3-11P01762 117 aa16.87■□□□□ 0.29
SSNA1-202ENST00000459860 IL6RP08887 468 aaPredicted RBP16.87■□□□□ 0.29
SSNA1-202ENST00000459860 OR8U8P0C7N1 319 aa16.87■□□□□ 0.29
SSNA1-202ENST00000459860 ZNF616Q08AN1 781 aa16.87■□□□□ 0.29
SSNA1-202ENST00000459860 TP53RKQ96S44 253 aa16.87■□□□□ 0.29
SSNA1-202ENST00000459860 MCRIP2Q9BUT9 160 aaKnown RBP16.87■□□□□ 0.29
SSNA1-202ENST00000459860 GPR61Q9BZJ8 451 aa16.87■□□□□ 0.29
SSNA1-202ENST00000459860 FKBP11Q9NYL4 201 aa16.87■□□□□ 0.29
SSNA1-202ENST00000459860 PRNDQ9UKY0 176 aa16.87■□□□□ 0.29
SSNA1-202ENST00000459860 GPR132Q9UNW8 380 aa16.87■□□□□ 0.29
SSNA1-202ENST00000459860 G3V4G9 280 aa16.86■□□□□ 0.29
SSNA1-202ENST00000459860 MYOD1P15172 320 aa16.86■□□□□ 0.29
SSNA1-202ENST00000459860 AKR1C2P52895 323 aa16.86■□□□□ 0.29
SSNA1-202ENST00000459860 OR2B8PP59922 312 aa16.86■□□□□ 0.29
SSNA1-202ENST00000459860 USMG5Q96IX5 58 aa16.86■□□□□ 0.29
SSNA1-202ENST00000459860 QTRT1Q9BXR0 403 aaKnown RBP16.86■□□□□ 0.29
SSNA1-202ENST00000459860 C5orf66Q9H5L9 145 aa16.86■□□□□ 0.29
SSNA1-202ENST00000459860 NPIPB5A8MRT5 1133 aa16.85■□□□□ 0.29
SSNA1-202ENST00000459860 IGLL1P15814 213 aa16.85■□□□□ 0.29
SSNA1-202ENST00000459860 ZNF45Q02386 682 aa16.85■□□□□ 0.29
SSNA1-202ENST00000459860 FHL3Q13643 280 aa16.85■□□□□ 0.29
SSNA1-202ENST00000459860 SAMD5Q5TGI4 173 aa16.85■□□□□ 0.29
SSNA1-202ENST00000459860 OR1L8Q8NGR8 309 aa16.85■□□□□ 0.29
SSNA1-202ENST00000459860 OR4A16Q8NH70 328 aa16.85■□□□□ 0.29
SSNA1-202ENST00000459860 SEC22AQ96IW7 307 aa16.85■□□□□ 0.29
SSNA1-202ENST00000459860 SRSF8Q9BRL6 282 aaKnown RBP16.85■□□□□ 0.29
SSNA1-202ENST00000459860 RTBDNQ9BSG5 229 aaPredicted RBP16.85■□□□□ 0.29
SSNA1-202ENST00000459860 NAA60Q9H7X0 242 aa16.85■□□□□ 0.29
SSNA1-202ENST00000459860 OR51B2Q9Y5P1 312 aa16.85■□□□□ 0.29
SSNA1-202ENST00000459860 FAM223BA6NKX1 122 aa16.84■□□□□ 0.29
SSNA1-202ENST00000459860 E7EUB6 86 aa16.84■□□□□ 0.29
SSNA1-202ENST00000459860 LINC01619G3V211 115 aa16.84■□□□□ 0.29
SSNA1-202ENST00000459860 RBMXL2O75526 392 aaKnown RBP16.84■□□□□ 0.29
SSNA1-202ENST00000459860 IGKV1-39P01597 117 aa16.84■□□□□ 0.29
SSNA1-202ENST00000459860 IGKV1D-39P04432 117 aa16.84■□□□□ 0.29
SSNA1-202ENST00000459860 TRAPPC2P0DI81 140 aa16.84■□□□□ 0.29
SSNA1-202ENST00000459860 TRAPPC2BP0DI82 140 aa16.84■□□□□ 0.29
SSNA1-202ENST00000459860 DEFA4P12838 97 aa16.84■□□□□ 0.29
SSNA1-202ENST00000459860 UCP1P25874 307 aa16.84■□□□□ 0.29
SSNA1-202ENST00000459860 PSMB6P28072 239 aa16.84■□□□□ 0.29
SSNA1-202ENST00000459860 BEAN1Q3B7T3 259 aa16.84■□□□□ 0.29
SSNA1-202ENST00000459860 OXLD1Q5BKU9 147 aa16.84■□□□□ 0.29
SSNA1-202ENST00000459860 HSD17B13Q7Z5P4 300 aaPredicted RBP16.84■□□□□ 0.29
SSNA1-202ENST00000459860 FAM223AQ8IWN6 122 aa16.84■□□□□ 0.29
SSNA1-202ENST00000459860 SGPP2Q8IWX5 399 aa16.84■□□□□ 0.29
SSNA1-202ENST00000459860 RNASE11Q8TAA1 199 aaKnown RBP16.84■□□□□ 0.29
SSNA1-202ENST00000459860 HINT2Q9BX68 163 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms