RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 GP9P14770 177 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 F2RP25116 425 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 PSMB6P28072 239 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 KLF5Q13887 457 aaPredicted RBP12.43□□□□□ -0.42
CPSF6-203ENST00000456847 C15orf32Q32M92 178 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 LPCAT3Q6P1A2 487 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 OR9G4Q8NGQ1 327 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 FBXL7Q9UJT9 491 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 TRAV3A0A0B4J244 114 aa12.42□□□□□ -0.42
CPSF6-203ENST00000456847 A0A1B0GW64 132 aa12.42□□□□□ -0.42
CPSF6-203ENST00000456847 M0QYG6 137 aa12.42□□□□□ -0.42
CPSF6-203ENST00000456847 RGS5O15539 181 aa12.42□□□□□ -0.42
CPSF6-203ENST00000456847 DEFA4P12838 97 aa12.42□□□□□ -0.42
CPSF6-203ENST00000456847 LPAR6P43657 344 aa12.42□□□□□ -0.42
CPSF6-203ENST00000456847 DGCR14Q96DF8 476 aaKnown RBP12.42□□□□□ -0.42
CPSF6-203ENST00000456847 NOL3O60936 208 aaKnown RBP12.41□□□□□ -0.42
CPSF6-203ENST00000456847 IFNA6P05013 189 aa12.41□□□□□ -0.42
CPSF6-203ENST00000456847 SPCS2Q15005 226 aa12.41□□□□□ -0.42
CPSF6-203ENST00000456847 SMAD5-AS1Q9Y6J3 95 aa12.41□□□□□ -0.42
CPSF6-203ENST00000456847 SORL1Q92673 2214 aa12.41□□□□□ -0.42
CPSF6-203ENST00000456847 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.41□□□□□ -0.42
CPSF6-203ENST00000456847 MARCH11A6NNE9 402 aa12.41□□□□□ -0.42
CPSF6-203ENST00000456847 OR2B8PP59922 312 aa12.41□□□□□ -0.42
CPSF6-203ENST00000456847 RNASE10Q5GAN6 216 aaKnown RBP12.41□□□□□ -0.42
CPSF6-203ENST00000456847 FAM209BQ5JX69 171 aa12.41□□□□□ -0.42
CPSF6-203ENST00000456847 OR52I2Q8NH67 350 aa12.41□□□□□ -0.42
CPSF6-203ENST00000456847 C15orf40Q8WUR7 153 aa12.41□□□□□ -0.42
CPSF6-203ENST00000456847 FCAMRQ8WWV6 532 aa12.41□□□□□ -0.42
CPSF6-203ENST00000456847 BMPR1BO00238 502 aa12.4□□□□□ -0.42
CPSF6-203ENST00000456847 CRYGCP07315 174 aa12.4□□□□□ -0.42
CPSF6-203ENST00000456847 HIST1H1BP16401 226 aaKnown RBP12.4□□□□□ -0.42
CPSF6-203ENST00000456847 CTRB1P17538 263 aa12.4□□□□□ -0.42
CPSF6-203ENST00000456847 VAX1Q5SQQ9 334 aa12.4□□□□□ -0.42
CPSF6-203ENST00000456847 CTRB2Q6GPI1 263 aa12.4□□□□□ -0.42
CPSF6-203ENST00000456847 SLC38A6Q8IZM9 456 aa12.4□□□□□ -0.42
CPSF6-203ENST00000456847 RAB2BQ8WUD1 216 aa12.4□□□□□ -0.42
CPSF6-203ENST00000456847 PEMTQ9UBM1 199 aa12.4□□□□□ -0.42
CPSF6-203ENST00000456847 KLK11Q9UBX7 282 aa12.4□□□□□ -0.42
CPSF6-203ENST00000456847 CGB1A6NKQ9 187 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 NDUFB8O95169 186 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 KRASP01116 189 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 IGLV1-51P01701 117 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 IGHV3-23P01764 117 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 PGAM2P15259 253 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 G6PCP35575 357 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 TBC1D26Q86UD7 250 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 EEF1AKMT3Q96AZ1 226 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 QTRT1Q9BXR0 403 aaKnown RBP12.39□□□□□ -0.43
CPSF6-203ENST00000456847 S4R3C0 116 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 PPP5D1E7EU14 171 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 SNAPC5O75971 98 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 THOC7Q6I9Y2 204 aaKnown RBP12.39□□□□□ -0.43
CPSF6-203ENST00000456847 LAX1Q8IWV1 398 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 FANCD2OSQ96PS1 177 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 ASCL2Q99929 193 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 HINT2Q9BX68 163 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 MIXL1Q9H2W2 232 aa12.39□□□□□ -0.43
CPSF6-203ENST00000456847 CD3DP04234 171 aa12.38□□□□□ -0.43
CPSF6-203ENST00000456847 FGF2P09038 288 aa12.38□□□□□ -0.43
CPSF6-203ENST00000456847 TRAPPC2P0DI81 140 aa12.38□□□□□ -0.43
CPSF6-203ENST00000456847 TRAPPC2BP0DI82 140 aa12.38□□□□□ -0.43
CPSF6-203ENST00000456847 UCP3P55916 312 aa12.38□□□□□ -0.43
CPSF6-203ENST00000456847 ZNF585BQ52M93 769 aa12.38□□□□□ -0.43
CPSF6-203ENST00000456847 ABHD1Q96SE0 405 aa12.38□□□□□ -0.43
CPSF6-203ENST00000456847 SRSF8Q9BRL6 282 aaKnown RBP12.38□□□□□ -0.43
CPSF6-203ENST00000456847 MTFP1Q9UDX5 166 aa12.38□□□□□ -0.43
CPSF6-203ENST00000456847 NSG2Q9Y328 171 aa12.38□□□□□ -0.43
CPSF6-203ENST00000456847 IGLC7A0M8Q6 106 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 CYB5BO43169 146 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 GGCTO75223 188 aaKnown RBP12.37□□□□□ -0.43
CPSF6-203ENST00000456847 TPPPO94811 219 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 NHLRC4P0CG21 123 aaPredicted RBP12.37□□□□□ -0.43
CPSF6-203ENST00000456847 CLEC19AQ6UXS0 136 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 OR1L8Q8NGR8 309 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 BCL7BQ9BQE9 202 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 CCDC59Q9P031 241 aaKnown RBP12.37□□□□□ -0.43
CPSF6-203ENST00000456847 IGLV11-55A0A075B6I3 123 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 H0Y980 276 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 CTDSP2O14595 271 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 CSN3P07498 182 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 TBPP20226 339 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 ARL3P36405 182 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 PPP5CP53041 499 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 TMBIM6P55061 237 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 OR10W1Q8NGF6 305 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 OR51B2Q9Y5P1 312 aa12.37□□□□□ -0.43
CPSF6-203ENST00000456847 TEX50A0A1B0GTY4 177 aa12.36□□□□□ -0.43
CPSF6-203ENST00000456847 HLA-AP01891 365 aaKnown RBP12.36□□□□□ -0.43
CPSF6-203ENST00000456847 MECP2P51608 486 aaKnown RBP12.36□□□□□ -0.43
CPSF6-203ENST00000456847 TAS2R19P59542 299 aa12.36□□□□□ -0.43
CPSF6-203ENST00000456847 IL34Q6ZMJ4 242 aa12.36□□□□□ -0.43
CPSF6-203ENST00000456847 ARRDC1Q8N5I2 433 aa12.36□□□□□ -0.43
CPSF6-203ENST00000456847 DYNLRB2Q8TF09 96 aa12.36□□□□□ -0.43
CPSF6-203ENST00000456847 CXorf58Q96LI9 332 aa12.36□□□□□ -0.43
CPSF6-203ENST00000456847 CCDC140Q96MF4 163 aa12.36□□□□□ -0.43
CPSF6-203ENST00000456847 FAM212BQ9NTI7 297 aaPredicted RBP12.36□□□□□ -0.43
CPSF6-203ENST00000456847 THYN1Q9P016 225 aa12.36□□□□□ -0.43
CPSF6-203ENST00000456847 PRNDQ9UKY0 176 aa12.36□□□□□ -0.43
CPSF6-203ENST00000456847 GABARAPH6UMI1 98 aa12.35□□□□□ -0.43
CPSF6-203ENST00000456847 OR13C7P0DN81 318 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms