RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 PRRC2BQ5JSZ5 2229 aaKnown RBP4.25□□□□□ -1.73
PCDH9-203ENST00000456367 IGHV2-26A0A0B4J1V2 119 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 TMEM238C9JI98 176 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 TMEM50AO95807 157 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 OR2H2O95918 312 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 LIFP15018 202 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 CXCL12P48061 93 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 PDLIM4P50479 330 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 NMSQ5H8A3 153 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 Q6ZS49 121 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 BADQ92934 168 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 ZNF488Q96MN9 340 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 SBF2Q86WG5 1849 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 A0A0G2JMZ2 1700 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 LRRC37A2A6NM11 1700 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 LRRC37AA6NMS7 1700 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 RALGAPA2Q2PPJ7 1873 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 A0A1W2PQM1 296 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 C4orf51C9J302 202 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 K7EP13 123 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 MEOX1P50221 254 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 SPATA46Q5T0L3 261 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 INO80CQ6PI98 192 aaPredicted RBP4.24□□□□□ -1.73
PCDH9-203ENST00000456367 TMEM144Q7Z5S9 345 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 CIARTQ8N365 385 aaPredicted RBP4.24□□□□□ -1.73
PCDH9-203ENST00000456367 ZNF502Q8TBZ5 544 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 TIMD4Q96H15 378 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 PYGO2Q9BRQ0 406 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 SEPSECSQ9HD40 501 aaKnown RBP4.24□□□□□ -1.73
PCDH9-203ENST00000456367 IGHV1OR21-1A0A087WYE8 117 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 HIGD1CA8MV81 97 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 LGALS3P17931 250 aaKnown RBP4.24□□□□□ -1.73
PCDH9-203ENST00000456367 RAB9AP51151 201 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 FOXA3P55318 350 aaPredicted RBP4.24□□□□□ -1.73
PCDH9-203ENST00000456367 TFF3Q07654 80 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 WIPI1Q5MNZ9 446 aaPredicted RBP4.24□□□□□ -1.73
PCDH9-203ENST00000456367 C1QL2Q7Z5L3 287 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 ST6GALNAC3Q8NDV1 305 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 OR52E5Q8NH55 327 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 SCARF2Q96GP6 870 aaPredicted RBP4.24□□□□□ -1.73
PCDH9-203ENST00000456367 ZNF714Q96N38 554 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 SSBP3Q9BWW4 388 aaPredicted RBP4.24□□□□□ -1.73
PCDH9-203ENST00000456367 ZNF831Q5JPB2 1677 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 IGHV2-70DA0A0C4DH43 119 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 KBTBD11-OT1A0A1B0GTJ5 212 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 C9orf118A6NHY6 69 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 PRR32B1ATL7 298 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 SYS1-DBNDD2H3BUS1 97 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 HOXA3O43365 443 aaPredicted RBP4.24□□□□□ -1.73
PCDH9-203ENST00000456367 CGAP01215 116 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 CEACAM3P40198 252 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 QRFPP83859 136 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 RHOGP84095 191 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 SPANXN1Q5VSR9 72 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 PCSK4Q6UW60 755 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 RLN3Q8WXF3 142 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 CSTL1Q9H114 145 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 GTSF1LQ9H1H1 148 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 NXT2Q9NPJ8 142 aaKnown RBP4.24□□□□□ -1.73
PCDH9-203ENST00000456367 TNFRSF19Q9NS68 423 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 NHP2Q9NX24 153 aaKnown RBP4.24□□□□□ -1.73
PCDH9-203ENST00000456367 PPIAL4EA0A075B759 164 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 F8W1H4 67 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 IFNL4K9M1U5 179 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 DPM2O94777 84 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 TSPAN13O95857 204 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 PATE4P0C8F1 98 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 PPIAL4FP0DN26 164 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 RPL8P62917 257 aaKnown RBP4.24□□□□□ -1.73
PCDH9-203ENST00000456367 CD300EQ496F6 205 aaPredicted RBP4.24□□□□□ -1.73
PCDH9-203ENST00000456367 TMEM14EPQ6UXP3 125 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 MOB3BQ86TA1 216 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 DEFB108BQ8NET1 73 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 Q8NFD4 153 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 SIGLEC12Q96PQ1 595 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 PPIAL4AQ9Y536 164 aa4.24□□□□□ -1.73
PCDH9-203ENST00000456367 ASCL5Q7RTU5 278 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 RPP25LQ8N5L8 163 aaKnown RBP4.23□□□□□ -1.73
PCDH9-203ENST00000456367 OR13C6PQ8NH95 151 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 GEMIN7Q9H840 131 aaKnown RBP4.23□□□□□ -1.73
PCDH9-203ENST00000456367 MYO16Q9Y6X6 1858 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 A0A0A6YYD4 124 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 TRAV8-2A0A0B4J237 113 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 hCG_38984A0A1B0GV85 526 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 RBPJQ06330 500 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 TNXAQ16473 311 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 TM4SF20Q53R12 229 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 HES3Q5TGS1 186 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 ARPC1AQ92747 370 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 IFI27L2Q9H2X8 130 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 CLEC5AQ9NY25 188 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 HILPDAQ9Y5L2 63 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 F5H697 171 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 K7EP34 96 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 LAMTOR5O43504 91 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 SRFP11831 508 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 PRDX2P32119 198 aa4.23□□□□□ -1.73
PCDH9-203ENST00000456367 SSBP2P81877 361 aaPredicted RBP4.23□□□□□ -1.73
PCDH9-203ENST00000456367 CIRBPQ14011 172 aaKnown RBP4.23□□□□□ -1.73
PCDH9-203ENST00000456367 KIR3DS1Q14943 382 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms