RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 NFAM1Q8NET5 270 aaPredicted RBP3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 OR2D2Q9H210 308 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 SLC39A9Q9NUM3 307 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 PTRH2Q9Y3E5 179 aaKnown RBP3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 OR5B21A6NL26 309 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 TMEM150CB9EJG8 249 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 ZNF253O75346 499 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 DRD1P21728 446 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 EDDM3BP56851 147 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 RBM11P57052 281 aaKnown RBP3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 Q6ZSR6 202 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 MCEMP1Q8IX19 187 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 SLC46A1Q96NT5 459 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 COL6A5A8TX70 2615 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 C17orf98A8MV24 154 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 SERF2P84101 59 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 SPIN3Q5JUX0 258 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 OR4A47Q6IF82 309 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 KLHL24Q6TFL4 600 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 WDR86Q86TI4 376 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 MMD2Q8IY49 270 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 MUC15Q8N387 334 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 ZNF738Q8NE65 137 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 OR10G9Q8NGN4 311 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 OR10G7Q8NGN6 311 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 PSMG3Q9BT73 122 aaPredicted RBP3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 NPCDR1Q9BY65 106 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 GTSF1LQ9H1H1 148 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 PLEK2Q9NYT0 353 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 IGHV1-69-2A0A0G2JMI3 117 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 A0A0J9YW62 118 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 hCG_38984A0A1B0GV85 526 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 IGHV3-48P01763 117 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 CEACAM3P40198 252 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 CCR5P51681 352 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 LRRC10Q5BKY1 277 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 SSMEM1Q8WWF3 244 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 IL1F10Q8WWZ1 152 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 RERGQ96A58 199 aaPredicted RBP3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 DEFB118Q96PH6 123 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 ASCL2Q99929 193 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 KLF13Q9Y2Y9 288 aaPredicted RBP3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 HELZ2Q9BYK8 2649 aaKnown RBP3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 TRAV30A0A087WSZ9 112 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 TRAV26-1A0A087WT03 109 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 DUXBA0A1W2PPF3 345 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 M0R296 226 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 FGF6P10767 208 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 B4GALT1P15291 398 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 ZNF32P17041 273 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 ATP5G2Q06055 141 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 ZNF575Q86XF7 245 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 ABHD12Q8N2K0 398 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 DRAM1Q8N682 238 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 UQCR10Q9UDW1 63 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 NPIPB13A6NJU9 1138 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 NPIPB4C9JG80 1138 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 SYNGR3O43761 229 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 IFI6P09912 130 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 LINC00869P0C866 280 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 GP1BBP13224 206 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 CEBPDP49716 269 aaPredicted RBP3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 ACOT6Q3I5F7 207 aaPredicted RBP3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 MIC13Q5XKP0 118 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 SHISA2Q6UWI4 295 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 DOK3Q7L591 496 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 PP6455Q8WZ26 134 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 A0A0J9YY10 115 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 FAM231BA6NCW3 169 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 FRG2CA6NGY1 282 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 GAS8-AS1O95177 125 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 TNFP01375 233 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 GLB1P16278 677 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 RPS21P63220 83 aaKnown RBP3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 PLCXD2Q0VAA5 305 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 RUNX3Q13761 415 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 VAMP3Q15836 100 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 TBR1Q16650 682 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 NRN1LQ496H8 165 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 ABCA11PQ4W5N1 156 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 NEGR1Q7Z3B1 354 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 ZNF695Q8IW36 515 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 OR1L3Q8NH93 324 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 NEIL1Q96FI4 390 aaPredicted RBP3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 NECAP2Q9NVZ3 263 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 MRPL36Q9P0J6 103 aaKnown RBP3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 COL5A1P20908 1838 aaPredicted RBP3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 A0A0G2JMM0 328 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 TMEM238LA0A1B0GVL6 79 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 A0A1W2PPB8 328 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 KIR3DP1A8MWS1 328 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 E7EUB6 86 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 ARL14EPLP0DKL9 152 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 CA6P23280 308 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 SRD5A2P31213 254 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 G6PCP35575 357 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 FXYD7P58549 80 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 CX3CL1P78423 397 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 SLC38A11Q08AI6 406 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms