RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 MND1Q9BWT6 205 aa17.03■□□□□ 0.32
PTPRA-208ENST00000455631 IGKV1D-8A0A087WSZ0 117 aa17.02■□□□□ 0.32
PTPRA-208ENST00000455631 TMEM272A0A1B0GTI8 110 aa17.02■□□□□ 0.32
PTPRA-208ENST00000455631 TGOLN2O43493 480 aa17.02■□□□□ 0.32
PTPRA-208ENST00000455631 CTSDP07339 412 aaPredicted RBP17.02■□□□□ 0.32
PTPRA-208ENST00000455631 BPIFB6Q8NFQ5 453 aa17.02■□□□□ 0.32
PTPRA-208ENST00000455631 CENPOQ9BU64 300 aa17.02■□□□□ 0.32
PTPRA-208ENST00000455631 C20orf24Q9BUV8 137 aa17.02■□□□□ 0.32
PTPRA-208ENST00000455631 MFNGO00587 321 aa17.01■□□□□ 0.31
PTPRA-208ENST00000455631 HLA-GP17693 338 aa17.01■□□□□ 0.31
PTPRA-208ENST00000455631 GADD45AP24522 165 aa17.01■□□□□ 0.31
PTPRA-208ENST00000455631 TALDO1P37837 337 aa17.01■□□□□ 0.31
PTPRA-208ENST00000455631 THYN1Q9P016 225 aa17.01■□□□□ 0.31
PTPRA-208ENST00000455631 RAB22AQ9UL26 194 aa17.01■□□□□ 0.31
PTPRA-208ENST00000455631 SPATA2Q9UM82 520 aa17.01■□□□□ 0.31
PTPRA-208ENST00000455631 FAT2Q9NYQ8 4349 aa17.01■□□□□ 0.31
PTPRA-208ENST00000455631 IGHV3OR16-8A0A075B7F1 116 aa17■□□□□ 0.31
PTPRA-208ENST00000455631 OR2T8A6NH00 312 aa17■□□□□ 0.31
PTPRA-208ENST00000455631 CGB1A6NKQ9 187 aa17■□□□□ 0.31
PTPRA-208ENST00000455631 PTBP1P26599 531 aaKnown RBP eCLIP17■□□□□ 0.315e-7■■■□□ 18.6
PTPRA-208ENST00000455631 DHRSXQ8N5I4 330 aa17■□□□□ 0.31
PTPRA-208ENST00000455631 OR10R2Q8NGX6 335 aa17■□□□□ 0.31
PTPRA-208ENST00000455631 OR4A5Q8NH83 315 aa17■□□□□ 0.31
PTPRA-208ENST00000455631 OR2W1Q9Y3N9 320 aa17■□□□□ 0.31
PTPRA-208ENST00000455631 C11orf94C9JXX5 98 aa16.99■□□□□ 0.31
PTPRA-208ENST00000455631 ZNF207O43670 478 aaKnown RBP16.99■□□□□ 0.31
PTPRA-208ENST00000455631 IGLV2-14P01704 120 aa16.99■□□□□ 0.31
PTPRA-208ENST00000455631 HIST1H1DP16402 221 aaKnown RBP16.99■□□□□ 0.31
PTPRA-208ENST00000455631 NFYAP23511 347 aaPredicted RBP16.99■□□□□ 0.31
PTPRA-208ENST00000455631 SPHARQ15513 63 aa16.99■□□□□ 0.31
PTPRA-208ENST00000455631 HES5Q5TA89 166 aa16.99■□□□□ 0.31
PTPRA-208ENST00000455631 LIPKQ5VXJ0 399 aa16.99■□□□□ 0.31
PTPRA-208ENST00000455631 C8orf59Q8N0T1 100 aaPredicted RBP16.99■□□□□ 0.31
PTPRA-208ENST00000455631 HSD17B10Q99714 261 aaKnown RBP16.99■□□□□ 0.31
PTPRA-208ENST00000455631 PLCXD1Q9NUJ7 323 aa16.99■□□□□ 0.31
PTPRA-208ENST00000455631 PRSS29PA6NIE9 313 aa16.98■□□□□ 0.31
PTPRA-208ENST00000455631 SLC22A5O76082 557 aa16.98■□□□□ 0.31
PTPRA-208ENST00000455631 CA1P00915 261 aaPredicted RBP16.98■□□□□ 0.31
PTPRA-208ENST00000455631 HRASP01112 189 aa16.98■□□□□ 0.31
PTPRA-208ENST00000455631 GNAO1P09471 354 aa16.98■□□□□ 0.31
PTPRA-208ENST00000455631 Q6ZS49 121 aa16.98■□□□□ 0.31
PTPRA-208ENST00000455631 UFD1Q92890 307 aa16.98■□□□□ 0.31
PTPRA-208ENST00000455631 HRASLSQ9HDD0 168 aa16.98■□□□□ 0.31
PTPRA-208ENST00000455631 FKBP14Q9NWM8 211 aa16.98■□□□□ 0.31
PTPRA-208ENST00000455631 TAS2R8Q9NYW2 309 aa16.98■□□□□ 0.31
PTPRA-208ENST00000455631 DNAH2Q9P225 4427 aa16.98■□□□□ 0.31
PTPRA-208ENST00000455631 IGKV1D-13A0A0B4J2D9 117 aa16.97■□□□□ 0.31
PTPRA-208ENST00000455631 ARL6IP5O75915 188 aa16.97■□□□□ 0.31
PTPRA-208ENST00000455631 HLA-DQB1P01920 261 aa16.97■□□□□ 0.31
PTPRA-208ENST00000455631 IGKV1-13P0DP09 117 aa16.97■□□□□ 0.31
PTPRA-208ENST00000455631 ADMP35318 185 aa16.97■□□□□ 0.31
PTPRA-208ENST00000455631 RANBP1P43487 201 aa16.97■□□□□ 0.31
PTPRA-208ENST00000455631 TFPI2P48307 235 aa16.97■□□□□ 0.31
PTPRA-208ENST00000455631 BRWD1-AS2P59051 145 aa16.97■□□□□ 0.31
PTPRA-208ENST00000455631 OR2B8PP59922 312 aa16.97■□□□□ 0.31
PTPRA-208ENST00000455631 SSX1Q16384 188 aa16.97■□□□□ 0.31
PTPRA-208ENST00000455631 TMEM91Q6ZNR0 172 aa16.97■□□□□ 0.31
PTPRA-208ENST00000455631 LSM2Q9Y333 95 aaKnown RBP16.97■□□□□ 0.31
PTPRA-208ENST00000455631 V9GY05 133 aa16.97■□□□□ 0.31
PTPRA-208ENST00000455631 IGLC7A0M8Q6 106 aa16.96■□□□□ 0.31
PTPRA-208ENST00000455631 NDUFA4O00483 81 aa16.96■□□□□ 0.31
PTPRA-208ENST00000455631 CALRP27797 417 aaKnown RBP16.96■□□□□ 0.31
PTPRA-208ENST00000455631 RPS25P62851 125 aaKnown RBP16.96■□□□□ 0.31
PTPRA-208ENST00000455631 IRF3Q14653 427 aa16.96■□□□□ 0.31
PTPRA-208ENST00000455631 TIMM50Q3ZCQ8 353 aa16.96■□□□□ 0.31
PTPRA-208ENST00000455631 VN1R17PQ8TDU5 208 aa16.96■□□□□ 0.31
PTPRA-208ENST00000455631 BSCL2Q96G97 398 aaPredicted RBP16.96■□□□□ 0.31
PTPRA-208ENST00000455631 BET1LQ9NYM9 111 aa16.96■□□□□ 0.31
PTPRA-208ENST00000455631 ERICH4A6NGS2 130 aa16.95■□□□□ 0.3
PTPRA-208ENST00000455631 EIF4EBP1Q13541 118 aaPredicted RBP16.95■□□□□ 0.3
PTPRA-208ENST00000455631 TMEM187Q14656 261 aa16.95■□□□□ 0.3
PTPRA-208ENST00000455631 MFSD4AQ8N468 514 aa16.95■□□□□ 0.3
PTPRA-208ENST00000455631 GPHA2Q96T91 129 aa16.95■□□□□ 0.3
PTPRA-208ENST00000455631 RNF2Q99496 336 aa16.95■□□□□ 0.3
PTPRA-208ENST00000455631 KRTAP4-5Q9BYR2 181 aa16.95■□□□□ 0.3
PTPRA-208ENST00000455631 IGKV3-7A0A075B6H7 116 aa16.94■□□□□ 0.3
PTPRA-208ENST00000455631 CYB5BO43169 146 aa16.94■□□□□ 0.3
PTPRA-208ENST00000455631 CMC4P56277 68 aaPredicted RBP16.94■□□□□ 0.3
PTPRA-208ENST00000455631 ELF5Q9UKW6 265 aaPredicted RBP16.94■□□□□ 0.3
PTPRA-208ENST00000455631 IGHV4-4A0A075B6R2 117 aa16.93■□□□□ 0.3
PTPRA-208ENST00000455631 K7EMT4 169 aa16.93■□□□□ 0.3
PTPRA-208ENST00000455631 CTXN2P0C2S0 81 aa16.93■□□□□ 0.3
PTPRA-208ENST00000455631 DTYMKP23919 212 aa16.93■□□□□ 0.3
PTPRA-208ENST00000455631 SPSB3Q6PJ21 355 aa16.93■□□□□ 0.3
PTPRA-208ENST00000455631 CHRDL1Q9BU40 450 aa16.93■□□□□ 0.3
PTPRA-208ENST00000455631 COMMD5Q9GZQ3 224 aa16.93■□□□□ 0.3
PTPRA-208ENST00000455631 HRH4Q9H3N8 390 aa16.93■□□□□ 0.3
PTPRA-208ENST00000455631 ETV7Q9Y603 341 aa16.93■□□□□ 0.3
PTPRA-208ENST00000455631 IGHV3-21A0A0B4J1V1 117 aa16.92■□□□□ 0.3
PTPRA-208ENST00000455631 MRPS14O60783 128 aaKnown RBP16.92■□□□□ 0.3
PTPRA-208ENST00000455631 ZNF66Q6ZN08 573 aa16.92■□□□□ 0.3
PTPRA-208ENST00000455631 NR2C2APQ86WQ0 139 aa16.92■□□□□ 0.3
PTPRA-208ENST00000455631 UBAC2Q8NBM4 344 aa16.92■□□□□ 0.3
PTPRA-208ENST00000455631 SRSF8Q9BRL6 282 aaKnown RBP16.92■□□□□ 0.3
PTPRA-208ENST00000455631 SMPXQ9UHP9 88 aa16.92■□□□□ 0.3
PTPRA-208ENST00000455631 DYNC1H1Q14204 4646 aaKnown RBP16.92■□□□□ 0.3
PTPRA-208ENST00000455631 C15orf62A8K5M9 175 aa16.91■□□□□ 0.3
PTPRA-208ENST00000455631 PTGES3LE9PB15 166 aa16.91■□□□□ 0.3
PTPRA-208ENST00000455631 RTL8CO15255 209 aa16.91■□□□□ 0.3
PTPRA-208ENST00000455631 TNFSF12O43508 249 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms