RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 GNPDA2Q8TDQ7 276 aa2.55□□□□□ -2
HMGB1P15-201ENST00000453854 C11orf40Q8WZ69 217 aa2.55□□□□□ -2
HMGB1P15-201ENST00000453854 GALMQ96C23 342 aa2.55□□□□□ -2
HMGB1P15-201ENST00000453854 FXYD5Q96DB9 178 aa2.55□□□□□ -2
HMGB1P15-201ENST00000453854 GPER1Q99527 375 aa2.55□□□□□ -2
HMGB1P15-201ENST00000453854 CHAC1Q9BUX1 264 aa2.55□□□□□ -2
HMGB1P15-201ENST00000453854 GGTLC1Q9BX51 225 aa2.55□□□□□ -2
HMGB1P15-201ENST00000453854 ABCG5Q9H222 651 aa2.55□□□□□ -2
HMGB1P15-201ENST00000453854 NOX3Q9HBY0 568 aa2.55□□□□□ -2
HMGB1P15-201ENST00000453854 TAC3Q9UHF0 121 aa2.55□□□□□ -2
HMGB1P15-201ENST00000453854 RWDD2AQ9UIY3 292 aa2.55□□□□□ -2
HMGB1P15-201ENST00000453854 PCYT1BQ9Y5K3 369 aaPredicted RBP2.55□□□□□ -2
HMGB1P15-201ENST00000453854 TET1Q8NFU7 2136 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 YLPM1P49750 1951 aaKnown RBP2.54□□□□□ -2
HMGB1P15-201ENST00000453854 FREM2Q5SZK8 3169 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 ANKRD17O75179 2603 aaKnown RBP2.54□□□□□ -2
HMGB1P15-201ENST00000453854 IGSF10Q6WRI0 2623 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 HECTD1Q9ULT8 2610 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 H3BSA7 217 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 PANO1I0J062 215 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 ISLRO14498 428 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 CHST10O43529 356 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 PFN1P07737 140 aaKnown RBP2.54□□□□□ -2
HMGB1P15-201ENST00000453854 CTLA4P16410 223 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 ELK1P19419 428 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 HSPA9P38646 679 aaKnown RBP2.54□□□□□ -2
HMGB1P15-201ENST00000453854 CXCL5P42830 114 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 MAP2K4P45985 399 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 PSMB3P49720 205 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 NUDT2P50583 147 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 CTBP2P56545 445 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 RAB2AP61019 212 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 AP1S1P61966 158 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 RUNX1Q01196 453 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 CAV1Q03135 178 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 PSG7Q13046 419 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 BRMS1LQ5PSV4 323 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 TMEM78Q5T7P6 136 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 NANOGP8Q6NSW7 305 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 SBSNQ6UWP8 590 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 SLC35F6Q8N357 371 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 SLC25A29Q8N8R3 303 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 OR9I1Q8NGQ6 314 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 OR13D1Q8NGV5 346 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 OR5H2Q8NGV7 314 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 LHFPL5Q8TAF8 219 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 C15orf40Q8WUR7 153 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 FRZBQ92765 325 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 MS4A6EQ96DS6 147 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 TMEM70Q9BUB7 260 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 GTSF1LQ9H1H1 148 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 SH3BGRL3Q9H299 93 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 FAM96AQ9H5X1 160 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 NANOGQ9H9S0 305 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 PRTFDC1Q9NRG1 225 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 CISHQ9NSE2 258 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 LYRM2Q9NU23 88 aaPredicted RBP2.54□□□□□ -2
HMGB1P15-201ENST00000453854 SPANXCQ9NY87 97 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 DEC1Q9P2X7 70 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 UTP11Q9Y3A2 253 aaKnown RBP2.54□□□□□ -2
HMGB1P15-201ENST00000453854 TMEM56-RWDD3S4R434 201 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 FOCADQ5VW36 1801 aa2.54□□□□□ -2
HMGB1P15-201ENST00000453854 NID2Q14112 1375 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 RFX7Q2KHR2 1363 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 MYH7BA7E2Y1 1941 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 IGHV3-72A0A0B4J1Y9 119 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 IGHV5-51A0A0C4DH38 117 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 IGSF23A1L1A6 192 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 OR5H1A6NKK0 313 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 OR4C45A6NMZ5 311 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 SOCS1O15524 211 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 ORC5O43913 435 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 POP7O75817 140 aaKnown RBP2.53□□□□□ -2
HMGB1P15-201ENST00000453854 MT-CO2P00403 227 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 C1QBP02746 253 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 FBP1P09467 338 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 ZNF688P0C7X2 276 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 SPI1P17947 270 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 CNTFRP26992 372 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 ERP29P30040 261 aaKnown RBP2.53□□□□□ -2
HMGB1P15-201ENST00000453854 NUDT1P36639 197 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 UBE2AP49459 152 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 ZNF83P51522 516 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 ZNF133P52736 654 aaPredicted RBP2.53□□□□□ -2
HMGB1P15-201ENST00000453854 WNT4P56705 351 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 SNRPD2P62316 118 aaKnown RBP2.53□□□□□ -2
HMGB1P15-201ENST00000453854 IL15RAQ13261 267 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 JOSD1Q15040 202 aaPredicted RBP2.53□□□□□ -2
HMGB1P15-201ENST00000453854 PLPPR5Q32ZL2 321 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 ABCA11PQ4W5N1 156 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 C1orf194Q5T5A4 169 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 MORN3Q6PF18 240 aaPredicted RBP2.53□□□□□ -2
HMGB1P15-201ENST00000453854 TMEM205Q6UW68 189 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 TMPPEQ6ZT21 453 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 GOLT1AQ6ZVE7 132 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 FA2HQ7L5A8 372 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 ATP5L2Q7Z4Y8 100 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 ZNF567Q8N184 647 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 OR2M3Q8NG83 312 aa2.53□□□□□ -2
HMGB1P15-201ENST00000453854 OR11H6Q8NGC7 330 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms