RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 CHST1O43916 411 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 DEDDO75618 318 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 POLR2GP62487 172 aaKnown RBP eCLIP10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 VAMP2P63027 116 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 C5orf64Q2M2E5 130 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 PDLIM3Q53GG5 364 aaPredicted RBP10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 Q5BKY6 102 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 PRSS54Q6PEW0 395 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 TMEM65Q6PI78 240 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 Q6YL49 198 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 ZNF546Q86UE3 836 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 OR1L8Q8NGR8 309 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 OR5R1Q8NH85 324 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 RBM14Q96PK6 669 aaKnown RBP10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 CIB3Q96Q77 187 aaPredicted RBP10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 CLCC1Q96S66 551 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 FBXL15Q9H469 300 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 ZNF430Q9H8G1 570 aaPredicted RBP10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 TEX50A0A1B0GTY4 177 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 HMSDA8MTL9 139 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 CEBPZOSA8MTT3 80 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 H3BUX3 64 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 M0QZK8 103 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 GPR137BO60478 399 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 OR2F2O95006 317 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 LYL1P12980 280 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 NUP62P37198 522 aaPredicted RBP10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 IER3P46695 156 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 TAS2R30P59541 319 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 OR2B8PP59922 312 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 RPL23AP62750 156 aaKnown RBP10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 CLEC9AQ6UXN8 241 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 C16orf82Q7Z2V1 217 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 MRPL41Q8IXM3 137 aaKnown RBP10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 C22orf15Q8WYQ4 148 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 SMIM8Q96KF7 97 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 RASL11BQ9BPW5 248 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 SLC25A33Q9BSK2 321 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 MAGT1Q9H0U3 335 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 HIPK2Q9H2X6 1198 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 RBKSQ9H477 322 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 ENY2Q9NPA8 101 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 TCF19Q9Y242 345 aa10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 RCL1Q9Y2P8 373 aaKnown RBP10□□□□□ -0.81
HLA-DPA1-244ENST00000453337 FXYD6-FXYD2A0A087WZ82 144 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 A6NDX4 124 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 G3V3Q6 166 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 H0YIZ8 118 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 FGF16O43320 207 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 NXPH3O95157 252 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 CNIH1O95406 144 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 PJVKQ0ZLH3 352 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 ZNF562Q6V9R5 426 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 RBMS3Q6XE24 437 aaKnown RBP9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 Q8N9W7 124 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 INO80EQ8NBZ0 244 aaPredicted RBP9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 OR11H4Q8NGC9 324 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 SSMEM1Q8WWF3 244 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 SMR3AQ99954 134 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 MBD2Q9UBB5 411 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 CDC42EP3Q9UKI2 254 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 MOB4Q9Y3A3 225 aa9.99□□□□□ -0.81
HLA-DPA1-244ENST00000453337 MDFIC2A0A1B0GVS7 189 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 A0A1W2PN81 502 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 FCN1O00602 326 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 SSSCA1O60232 199 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 CHRNA7P36544 502 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 RPL27AP46776 148 aaKnown RBP9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 P2RY1P47900 373 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 COMPP49747 757 aaPredicted RBP9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 EIF2B2P49770 351 aaKnown RBP9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 RPP30P78346 268 aaKnown RBP9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 ERHP84090 104 aaKnown RBP9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 PRCDQ00LT1 54 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 TNXAQ16473 311 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 MRGPRG-AS1Q2M3A8 158 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 IL17RELQ6ZVW7 336 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 DTD1Q8TEA8 209 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 DCUN1D4Q92564 292 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 HINT2Q9BX68 163 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 SLC25A31Q9H0C2 315 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 HEYLQ9NQ87 328 aaPredicted RBP9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 TPSG1Q9NRR2 321 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 NDUFA4L2Q9NRX3 87 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 PSENENQ9NZ42 101 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 OR5AC2Q9NZP5 309 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 WSB1Q9Y6I7 421 aa9.98□□□□□ -0.81
HLA-DPA1-244ENST00000453337 BOLA2-SMG1P6H3BVE0 249 aa9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 TSC22D2O75157 780 aa9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 ATP5IP56385 69 aaPredicted RBP9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 GNB1P62873 340 aa9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 FXYD3Q14802 87 aa9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 LY6EQ16553 131 aa9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 TUSC1Q2TAM9 212 aa9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 FBLN7Q53RD9 439 aa9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 ACOT7LQ6ZUV0 252 aa9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 HSD17B13Q7Z5P4 300 aaPredicted RBP9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 ZNF48Q96MX3 618 aaPredicted RBP9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 SRSF8Q9BRL6 282 aaKnown RBP9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 MFFQ9GZY8 342 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms