RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 RNASE11Q8TAA1 199 aaKnown RBP11.46□□□□□ -0.57
TRAPPC12-211ENST00000452495 LHFPL5Q8TAF8 219 aa11.46□□□□□ -0.57
TRAPPC12-211ENST00000452495 TMEM68Q96MH6 324 aa11.46□□□□□ -0.57
TRAPPC12-211ENST00000452495 PHB2Q99623 299 aa11.46□□□□□ -0.57
TRAPPC12-211ENST00000452495 SPIN2AQ99865 258 aa11.46□□□□□ -0.57
TRAPPC12-211ENST00000452495 CITED1Q99966 193 aa11.46□□□□□ -0.57
TRAPPC12-211ENST00000452495 SPIN2BQ9BPZ2 258 aa11.46□□□□□ -0.57
TRAPPC12-211ENST00000452495 LINC00527Q9UJ94 153 aa11.46□□□□□ -0.57
TRAPPC12-211ENST00000452495 PRNDQ9UKY0 176 aa11.46□□□□□ -0.57
TRAPPC12-211ENST00000452495 FLVCR2Q9UPI3 526 aa11.46□□□□□ -0.57
TRAPPC12-211ENST00000452495 NUBP2Q9Y5Y2 271 aa11.46□□□□□ -0.57
TRAPPC12-211ENST00000452495 C15orf61A6NNL5 157 aa11.45□□□□□ -0.58
TRAPPC12-211ENST00000452495 HLA-AP01891 365 aaKnown RBP11.45□□□□□ -0.58
TRAPPC12-211ENST00000452495 OR4E1P0C645 316 aa11.45□□□□□ -0.58
TRAPPC12-211ENST00000452495 P0C879 139 aa11.45□□□□□ -0.58
TRAPPC12-211ENST00000452495 EGR2P11161 476 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC12-211ENST00000452495 MECP2P51608 486 aaKnown RBP11.45□□□□□ -0.58
TRAPPC12-211ENST00000452495 SELENOHQ8IZQ5 122 aaKnown RBP11.45□□□□□ -0.58
TRAPPC12-211ENST00000452495 LRTM2Q8N967 370 aa11.45□□□□□ -0.58
TRAPPC12-211ENST00000452495 OR5AU1Q8NGC0 362 aa11.45□□□□□ -0.58
TRAPPC12-211ENST00000452495 RRNAD1Q96FB5 475 aaKnown RBP11.45□□□□□ -0.58
TRAPPC12-211ENST00000452495 FAM103A1Q9BTL3 118 aaKnown RBP11.45□□□□□ -0.58
TRAPPC12-211ENST00000452495 COMMD5Q9GZQ3 224 aa11.45□□□□□ -0.58
TRAPPC12-211ENST00000452495 ALX4Q9H161 411 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC12-211ENST00000452495 FKBP11Q9NYL4 201 aa11.45□□□□□ -0.58
TRAPPC12-211ENST00000452495 FOXA2Q9Y261 457 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC12-211ENST00000452495 TRAV3A0A0B4J244 114 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 A0A0B4J2A0 478 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 C9orf170A2RU37 121 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 G3V318 75 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 IGHG4P01861 327 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 OR9G9P0C7N8 305 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 ANXA7P20073 488 aaKnown RBP11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 PPIFP30405 207 aaKnown RBP11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 DHRS2Q13268 280 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 FOXE3Q13461 319 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 C10orf55Q5SWW7 151 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 TEX38Q6PEX7 206 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 UNQ5815/PRO19632Q6UWF5 114 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 LYG2Q86SG7 212 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 SLC35G3Q8N808 338 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 MINDY2Q8NBR6 621 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 DUSP18Q8NEJ0 188 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 LFNGQ8NES3 379 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 OR5M8Q8NGP6 311 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 OR5B3Q8NH48 314 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 LSM10Q969L4 123 aaKnown RBP11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 SRSF8Q9BRL6 282 aaKnown RBP11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 TMEM14BQ9NUH8 114 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 SHPKQ9UHJ6 478 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 ZNF257Q9Y2Q1 563 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 WSB1Q9Y6I7 421 aa11.44□□□□□ -0.58
TRAPPC12-211ENST00000452495 TRAV6A0A075B6T7 132 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 A0A1W2PN81 502 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 H3BUA1 57 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 ELANEP08246 267 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 H2AFB2P0C5Z0 115 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 CHRNA7P36544 502 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 RAB25P57735 213 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 OR2B8PP59922 312 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 KRTAP10-3P60369 221 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 C4orf46Q504U0 113 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 HSD17B13Q7Z5P4 300 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 NRARPQ7Z6K4 114 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 ZNF329Q86UD4 541 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 ZNF429Q86V71 674 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 OR1L8Q8NGR8 309 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 OR4A16Q8NH70 328 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 QTRT1Q9BXR0 403 aaKnown RBP11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 PRR13Q9NZ81 148 aa11.43□□□□□ -0.58
TRAPPC12-211ENST00000452495 MSGN1A6NI15 193 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 TEX22C9J3V5 150 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 DUS4LO95620 317 aaKnown RBP11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 PTTG1O95997 202 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 IGLV1-40P01703 118 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 OPN1MWP04001 364 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 OPN1MW2P0DN77 364 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 OPN1MW3P0DN78 364 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 ANKRD55Q3KP44 614 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 CXorf66Q5JRM2 361 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 ASPHD1Q5U4P2 390 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 PLET1Q6UQ28 207 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 C10orf99Q6UWK7 81 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 MRPL41Q8IXM3 137 aaKnown RBP11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 RNF152Q8N8N0 203 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 COQ8AQ8NI60 647 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 FAM110DQ8TAY7 271 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 CASTOR1Q8WTX7 329 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 FYTTD1Q96QD9 318 aaKnown RBP11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 CACFD1Q9UGQ2 172 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 OR51B2Q9Y5P1 312 aa11.42□□□□□ -0.58
TRAPPC12-211ENST00000452495 A0A0G2JRQ6 117 aa11.41□□□□□ -0.58
TRAPPC12-211ENST00000452495 RBMXL2O75526 392 aaKnown RBP11.41□□□□□ -0.58
TRAPPC12-211ENST00000452495 BRI3O95415 125 aa11.41□□□□□ -0.58
TRAPPC12-211ENST00000452495 CD28P10747 220 aa11.41□□□□□ -0.58
TRAPPC12-211ENST00000452495 PSMB8P28062 276 aa11.41□□□□□ -0.58
TRAPPC12-211ENST00000452495 DCTN2Q13561 401 aaKnown RBP11.41□□□□□ -0.58
TRAPPC12-211ENST00000452495 AARDQ4LEZ3 155 aa11.41□□□□□ -0.58
TRAPPC12-211ENST00000452495 NMSQ5H8A3 153 aa11.41□□□□□ -0.58
TRAPPC12-211ENST00000452495 PDCD10Q9BUL8 212 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms