RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 PIGBOS1A0A0B4J2F0 54 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 LRRC30A6NM36 301 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 ZNF134P52741 427 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 C4orf17Q53FE4 359 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 SOHLH1Q5JUK2 328 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 VKORC1L1Q8N0U8 176 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 ZCCHC24Q8N2G6 241 aaKnown RBP10.01□□□□□ -0.81
COL27A1-202ENST00000451716 ZBTB34Q8NCN2 500 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 POLEQ07864 2286 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 H2BFWTQ7Z2G1 175 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 FAM57AQ8TBR7 257 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 ORAOV1Q8WV07 137 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 YPEL4Q96NS1 127 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 HCFC1P51610 2035 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 FCGR3BO75015 233 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 P0C879 139 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 CCKARP32238 428 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 GPR12P47775 334 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 HBG1P69891 147 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 HBG2P69892 147 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 TLE1Q04724 770 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 MZT1Q08AG7 82 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 SLC38A11Q08AI6 406 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 ZNF726P1Q15940 193 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 ST6GALNAC3Q8NDV1 305 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 SLC35E1Q96K37 410 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 SNX22Q96L94 193 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 GNG13Q9P2W3 67 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 HSPB7Q9UBY9 170 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 PPIAL4AQ9Y536 164 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 MGST3O14880 152 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 NBL1P41271 181 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 RHEBQ15382 184 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 MSMO1Q15800 293 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 MORN2Q502X0 79 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 ASCL5Q7RTU5 278 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 DOLPP1Q86YN1 238 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 CYB561D1Q8N8Q1 229 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 OR13D1Q8NGV5 346 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 SFXN3Q9BWM7 321 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 CTNNBIP1Q9NSA3 81 aaPredicted RBP10□□□□□ -0.81
COL27A1-202ENST00000451716 KIAA1456Q9P272 454 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 PTPRQQ9UMZ3 2332 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 IGF2RP11717 2491 aa10□□□□□ -0.81
COL27A1-202ENST00000451716 KIR2DL5BA0A0G2JN68 375 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 KIR2DL5BA0A0G2JPC4 375 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 ZFP92A6NM28 416 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 M0R1X1 148 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 HMGB3O15347 200 aaKnown RBP9.99□□□□□ -0.81
COL27A1-202ENST00000451716 CXCL1P09341 107 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 CD40P25942 277 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 ICAM4Q14773 271 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 LRRC75BQ2VPJ9 315 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 SP5Q6BEB4 398 aaPredicted RBP9.99□□□□□ -0.81
COL27A1-202ENST00000451716 C1orf229Q6ZS94 237 aaPredicted RBP9.99□□□□□ -0.81
COL27A1-202ENST00000451716 C1orf174Q8IYL3 243 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 KIR2DL5AQ8N109 375 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 ABHD5Q8WTS1 349 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 FRZBQ92765 325 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 RPUSD4Q96CM3 377 aaKnown RBP9.99□□□□□ -0.81
COL27A1-202ENST00000451716 SNRNP40Q96DI7 357 aaKnown RBP9.99□□□□□ -0.81
COL27A1-202ENST00000451716 CST9LQ9H4G1 147 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 ZNF665Q9H7R5 613 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 GCM1Q9NP62 436 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 NAGKQ9UJ70 344 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 A0A0G2JNJ9 132 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 NDUFB8O95169 186 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 CLDN14O95500 239 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 TMEM14EPQ6UXP3 125 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 LINC01551Q86U37 167 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 CLDND2Q8NHS1 167 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 WDR61Q9GZS3 305 aaKnown RBP9.99□□□□□ -0.81
COL27A1-202ENST00000451716 Q9UFV3 132 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 URGCP-MRPS24S4R325 110 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 NCOR2Q9Y618 2525 aa9.99□□□□□ -0.81
COL27A1-202ENST00000451716 IGLV3-9A0A075B6K5 115 aa9.98□□□□□ -0.81
COL27A1-202ENST00000451716 LHBP01229 141 aa9.98□□□□□ -0.81
COL27A1-202ENST00000451716 IGHV1-46P01743 117 aa9.98□□□□□ -0.81
COL27A1-202ENST00000451716 ADH4P08319 380 aa9.98□□□□□ -0.81
COL27A1-202ENST00000451716 SRP19P09132 144 aaKnown RBP9.98□□□□□ -0.81
COL27A1-202ENST00000451716 DUTP33316 252 aaKnown RBP9.98□□□□□ -0.81
COL27A1-202ENST00000451716 LOXL3P58215 753 aa9.98□□□□□ -0.81
COL27A1-202ENST00000451716 TNFAIP6P98066 277 aaPredicted RBP9.98□□□□□ -0.81
COL27A1-202ENST00000451716 FOXC1Q12948 553 aa9.98□□□□□ -0.81
COL27A1-202ENST00000451716 IQCJQ1A5X6 159 aa9.98□□□□□ -0.81
COL27A1-202ENST00000451716 ZNF343Q6P1L6 599 aa9.98□□□□□ -0.81
COL27A1-202ENST00000451716 FAM90A1Q86YD7 464 aa9.98□□□□□ -0.81
COL27A1-202ENST00000451716 C1orf87Q8N0U7 546 aa9.98□□□□□ -0.81
COL27A1-202ENST00000451716 HSD17B10Q99714 261 aaKnown RBP9.98□□□□□ -0.81
COL27A1-202ENST00000451716 QTRT1Q9BXR0 403 aaKnown RBP9.98□□□□□ -0.81
COL27A1-202ENST00000451716 CEBPZOSA8MTT3 80 aa9.98□□□□□ -0.81
COL27A1-202ENST00000451716 B9A039 149 aa9.98□□□□□ -0.81
COL27A1-202ENST00000451716 HPRT1P00492 218 aa9.98□□□□□ -0.81
COL27A1-202ENST00000451716 OR9G9P0C7N8 305 aa9.98□□□□□ -0.81
COL27A1-202ENST00000451716 CCL8P80075 99 aa9.98□□□□□ -0.81
COL27A1-202ENST00000451716 PRR30Q53SZ7 412 aaPredicted RBP9.98□□□□□ -0.81
COL27A1-202ENST00000451716 TAF15Q92804 592 aaKnown RBP eCLIP9.98□□□□□ -0.81
COL27A1-202ENST00000451716 PINX1Q96BK5 328 aaKnown RBP9.98□□□□□ -0.81
COL27A1-202ENST00000451716 A0A1B0GW64 132 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 FAM90A26D6RGX4 464 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms