RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 RNASE12Q5GAN4 147 aaKnown RBP13.42□□□□□ -0.26
FAM3A-216ENST00000449971 FAM223AQ8IWN6 122 aa13.42□□□□□ -0.26
FAM3A-216ENST00000449971 CMTM1Q8IZ96 169 aa13.42□□□□□ -0.26
FAM3A-216ENST00000449971 DMBX1Q8NFW5 382 aa13.42□□□□□ -0.26
FAM3A-216ENST00000449971 PLEKHA2Q9HB19 425 aa13.42□□□□□ -0.26
FAM3A-216ENST00000449971 SLC2A9Q9NRM0 540 aa13.42□□□□□ -0.26
FAM3A-216ENST00000449971 EXTL2Q9UBQ6 330 aa13.42□□□□□ -0.26
FAM3A-216ENST00000449971 TRBV9A0A0B4J1U6 114 aa13.41□□□□□ -0.26
FAM3A-216ENST00000449971 GPR31O00270 319 aa13.41□□□□□ -0.26
FAM3A-216ENST00000449971 UPK2O00526 184 aa13.41□□□□□ -0.26
FAM3A-216ENST00000449971 OR2J3O76001 311 aa13.41□□□□□ -0.26
FAM3A-216ENST00000449971 S1PR2O95136 353 aa13.41□□□□□ -0.26
FAM3A-216ENST00000449971 TRBV12-3P01733 135 aa13.41□□□□□ -0.26
FAM3A-216ENST00000449971 FRMD6-AS1P0C7T7 363 aa13.41□□□□□ -0.26
FAM3A-216ENST00000449971 ZNF735P0CB33 412 aa13.41□□□□□ -0.26
FAM3A-216ENST00000449971 SYNJ2BPP57105 145 aa13.41□□□□□ -0.26
FAM3A-216ENST00000449971 EXOSC2Q13868 293 aaKnown RBP13.41□□□□□ -0.26
FAM3A-216ENST00000449971 KLF5Q13887 457 aaPredicted RBP13.41□□□□□ -0.26
FAM3A-216ENST00000449971 CLVS1Q8IUQ0 354 aaPredicted RBP13.41□□□□□ -0.26
FAM3A-216ENST00000449971 NECAP1Q8NC96 275 aa13.41□□□□□ -0.26
FAM3A-216ENST00000449971 OR6Q1Q8NGQ2 317 aa13.41□□□□□ -0.26
FAM3A-216ENST00000449971 RSRP1Q9BUV0 290 aa13.41□□□□□ -0.26
FAM3A-216ENST00000449971 FXYD6Q9H0Q3 95 aa13.41□□□□□ -0.26
FAM3A-216ENST00000449971 ZNF257Q9Y2Q1 563 aa13.41□□□□□ -0.26
FAM3A-216ENST00000449971 CSMD3Q7Z407 3707 aa13.41□□□□□ -0.26
FAM3A-216ENST00000449971 TNCP24821 2201 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 TRAV3A0A0B4J244 114 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 A0A1B0GW64 132 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 NPIPB5A8MRT5 1133 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 AREGP15514 252 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 SPNP16150 400 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 F2RP25116 425 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 LPAR6P43657 344 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 ERVK-16P61578 105 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 SPCS2Q15005 226 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 POU2AF1Q16633 256 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 TATDN3Q17R31 274 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 RPEL1Q2QD12 228 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 PHLDA2Q53GA4 152 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 LPCAT3Q6P1A2 487 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 C19orf35Q6ZS72 473 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 DGCR14Q96DF8 476 aaKnown RBP13.4□□□□□ -0.26
FAM3A-216ENST00000449971 TMEM140Q9NV12 185 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 FBXL7Q9UJT9 491 aa13.4□□□□□ -0.26
FAM3A-216ENST00000449971 M0QYG6 137 aa13.39□□□□□ -0.27
FAM3A-216ENST00000449971 PSMB6P28072 239 aa13.39□□□□□ -0.27
FAM3A-216ENST00000449971 S100GP29377 79 aa13.39□□□□□ -0.27
FAM3A-216ENST00000449971 C15orf32Q32M92 178 aa13.39□□□□□ -0.27
FAM3A-216ENST00000449971 HAPLN4Q86UW8 402 aa13.39□□□□□ -0.27
FAM3A-216ENST00000449971 COMMD5Q9GZQ3 224 aa13.39□□□□□ -0.27
FAM3A-216ENST00000449971 COMMD9Q9P000 198 aa13.39□□□□□ -0.27
FAM3A-216ENST00000449971 KLK11Q9UBX7 282 aa13.39□□□□□ -0.27
FAM3A-216ENST00000449971 RGS5O15539 181 aa13.38□□□□□ -0.27
FAM3A-216ENST00000449971 DHFRP00374 187 aa13.38□□□□□ -0.27
FAM3A-216ENST00000449971 IFNA6P05013 189 aa13.38□□□□□ -0.27
FAM3A-216ENST00000449971 REG1AP05451 166 aa13.38□□□□□ -0.27
FAM3A-216ENST00000449971 DEFA4P12838 97 aa13.38□□□□□ -0.27
FAM3A-216ENST00000449971 OR2B8PP59922 312 aa13.38□□□□□ -0.27
FAM3A-216ENST00000449971 OR9G4Q8NGQ1 327 aa13.38□□□□□ -0.27
FAM3A-216ENST00000449971 OR52I2Q8NH67 350 aa13.38□□□□□ -0.27
FAM3A-216ENST00000449971 FCAMRQ8WWV6 532 aa13.38□□□□□ -0.27
FAM3A-216ENST00000449971 CITED4Q96RK1 184 aa13.38□□□□□ -0.27
FAM3A-216ENST00000449971 KRTAP17-1Q9BYP8 105 aa13.38□□□□□ -0.27
FAM3A-216ENST00000449971 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.37□□□□□ -0.27
FAM3A-216ENST00000449971 CGB1A6NKQ9 187 aa13.37□□□□□ -0.27
FAM3A-216ENST00000449971 CTDSP2O14595 271 aa13.37□□□□□ -0.27
FAM3A-216ENST00000449971 NDUFB8O95169 186 aa13.37□□□□□ -0.27
FAM3A-216ENST00000449971 KRASP01116 189 aa13.37□□□□□ -0.27
FAM3A-216ENST00000449971 CRYGCP07315 174 aa13.37□□□□□ -0.27
FAM3A-216ENST00000449971 GP9P14770 177 aa13.37□□□□□ -0.27
FAM3A-216ENST00000449971 ZNF585BQ52M93 769 aa13.37□□□□□ -0.27
FAM3A-216ENST00000449971 C15orf40Q8WUR7 153 aa13.37□□□□□ -0.27
FAM3A-216ENST00000449971 ISOC1Q96CN7 298 aa13.37□□□□□ -0.27
FAM3A-216ENST00000449971 ABHD1Q96SE0 405 aa13.37□□□□□ -0.27
FAM3A-216ENST00000449971 MIXL1Q9H2W2 232 aa13.37□□□□□ -0.27
FAM3A-216ENST00000449971 MARCH11A6NNE9 402 aa13.36□□□□□ -0.27
FAM3A-216ENST00000449971 BMPR1BO00238 502 aa13.36□□□□□ -0.27
FAM3A-216ENST00000449971 TPPPO94811 219 aa13.36□□□□□ -0.27
FAM3A-216ENST00000449971 IGHV3-23P01764 117 aa13.36□□□□□ -0.27
FAM3A-216ENST00000449971 CTRB1P17538 263 aa13.36□□□□□ -0.27
FAM3A-216ENST00000449971 G6PCP35575 357 aa13.36□□□□□ -0.27
FAM3A-216ENST00000449971 UCP3P55916 312 aa13.36□□□□□ -0.27
FAM3A-216ENST00000449971 RNASE10Q5GAN6 216 aaKnown RBP13.36□□□□□ -0.27
FAM3A-216ENST00000449971 CTRB2Q6GPI1 263 aa13.36□□□□□ -0.27
FAM3A-216ENST00000449971 IL34Q6ZMJ4 242 aa13.36□□□□□ -0.27
FAM3A-216ENST00000449971 TBC1D26Q86UD7 250 aa13.36□□□□□ -0.27
FAM3A-216ENST00000449971 SLC38A6Q8IZM9 456 aa13.36□□□□□ -0.27
FAM3A-216ENST00000449971 RAB2BQ8WUD1 216 aa13.36□□□□□ -0.27
FAM3A-216ENST00000449971 FANCD2OSQ96PS1 177 aa13.36□□□□□ -0.27
FAM3A-216ENST00000449971 MTFP1Q9UDX5 166 aa13.36□□□□□ -0.27
FAM3A-216ENST00000449971 S4R3C0 116 aa13.36□□□□□ -0.27
FAM3A-216ENST00000449971 TEX50A0A1B0GTY4 177 aa13.35□□□□□ -0.27
FAM3A-216ENST00000449971 SNAPC5O75971 98 aa13.35□□□□□ -0.27
FAM3A-216ENST00000449971 IGLV1-51P01701 117 aa13.35□□□□□ -0.27
FAM3A-216ENST00000449971 CD3DP04234 171 aa13.35□□□□□ -0.27
FAM3A-216ENST00000449971 TRAPPC2P0DI81 140 aa13.35□□□□□ -0.27
FAM3A-216ENST00000449971 TRAPPC2BP0DI82 140 aa13.35□□□□□ -0.27
FAM3A-216ENST00000449971 PGAM2P15259 253 aa13.35□□□□□ -0.27
FAM3A-216ENST00000449971 HIST1H1BP16401 226 aaKnown RBP13.35□□□□□ -0.27
FAM3A-216ENST00000449971 RPL5P46777 297 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms