RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 FAM223AQ8IWN6 122 aa10.76□□□□□ -0.69
RTFDC1-204ENST00000449062 NECAP1Q8NC96 275 aa10.76□□□□□ -0.69
RTFDC1-204ENST00000449062 RAB2BQ8WUD1 216 aa10.76□□□□□ -0.69
RTFDC1-204ENST00000449062 FCAMRQ8WWV6 532 aa10.76□□□□□ -0.69
RTFDC1-204ENST00000449062 COMMD9Q9P000 198 aa10.76□□□□□ -0.69
RTFDC1-204ENST00000449062 ZNF256Q9Y2P7 627 aaPredicted RBP10.76□□□□□ -0.69
RTFDC1-204ENST00000449062 ZNF257Q9Y2Q1 563 aa10.76□□□□□ -0.69
RTFDC1-204ENST00000449062 M0QYG6 137 aa10.75□□□□□ -0.69
RTFDC1-204ENST00000449062 MPPED1O15442 326 aa10.75□□□□□ -0.69
RTFDC1-204ENST00000449062 CD74P04233 296 aa10.75□□□□□ -0.69
RTFDC1-204ENST00000449062 RLN1P04808 185 aa10.75□□□□□ -0.69
RTFDC1-204ENST00000449062 PSMB6P28072 239 aa10.75□□□□□ -0.69
RTFDC1-204ENST00000449062 ATP5G2Q06055 141 aa10.75□□□□□ -0.69
RTFDC1-204ENST00000449062 LPCAT3Q6P1A2 487 aa10.75□□□□□ -0.69
RTFDC1-204ENST00000449062 LHFPL1Q86WI0 220 aa10.75□□□□□ -0.69
RTFDC1-204ENST00000449062 CMTM1Q8IZ96 169 aa10.75□□□□□ -0.69
RTFDC1-204ENST00000449062 FYTTD1Q96QD9 318 aaKnown RBP10.75□□□□□ -0.69
RTFDC1-204ENST00000449062 B9D2Q9BPU9 175 aa10.75□□□□□ -0.69
RTFDC1-204ENST00000449062 FAM212BQ9NTI7 297 aaPredicted RBP10.75□□□□□ -0.69
RTFDC1-204ENST00000449062 TMEM140Q9NV12 185 aa10.75□□□□□ -0.69
RTFDC1-204ENST00000449062 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.74□□□□□ -0.69
RTFDC1-204ENST00000449062 TEX50A0A1B0GTY4 177 aa10.74□□□□□ -0.69
RTFDC1-204ENST00000449062 IGLC7A0M8Q6 106 aa10.74□□□□□ -0.69
RTFDC1-204ENST00000449062 BMPR1BO00238 502 aa10.74□□□□□ -0.69
RTFDC1-204ENST00000449062 SAP30O75446 220 aa10.74□□□□□ -0.69
RTFDC1-204ENST00000449062 NDUFB8O95169 186 aa10.74□□□□□ -0.69
RTFDC1-204ENST00000449062 IGLV1-51P01701 117 aa10.74□□□□□ -0.69
RTFDC1-204ENST00000449062 CD3DP04234 171 aa10.74□□□□□ -0.69
RTFDC1-204ENST00000449062 MECP2P51608 486 aaKnown RBP10.74□□□□□ -0.69
RTFDC1-204ENST00000449062 TSPAN5P62079 268 aa10.74□□□□□ -0.69
RTFDC1-204ENST00000449062 LAX1Q8IWV1 398 aa10.74□□□□□ -0.69
RTFDC1-204ENST00000449062 C15orf40Q8WUR7 153 aa10.74□□□□□ -0.69
RTFDC1-204ENST00000449062 SOSTQ9BQB4 213 aa10.74□□□□□ -0.69
RTFDC1-204ENST00000449062 HRASLSQ9HDD0 168 aa10.74□□□□□ -0.69
RTFDC1-204ENST00000449062 IGLV11-55A0A075B6I3 123 aa10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 MARCH11A6NNE9 402 aa10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 OR2J3O76001 311 aa10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 KRASP01116 189 aa10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 IGKV1-39P01597 117 aa10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 IGKV1D-39P04432 117 aa10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 RPA2P15927 270 aa10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 SPNP16150 400 aa10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 PTBP1P26599 531 aaKnown RBP eCLIP10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 SYNJ2BPP57105 145 aa10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 C15orf32Q32M92 178 aa10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 PHLDA2Q53GA4 152 aa10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 OR4D10Q8NGI6 311 aa10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 SRSF8Q9BRL6 282 aaKnown RBP10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 SLIRPQ9GZT3 109 aaKnown RBP10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 SIGLEC8Q9NYZ4 499 aa10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 CCDC59Q9P031 241 aaKnown RBP10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 FBXL7Q9UJT9 491 aa10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 CEPT1Q9Y6K0 416 aa10.73□□□□□ -0.69
RTFDC1-204ENST00000449062 H3BMQ9 156 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 GABARAPH6UMI1 98 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 CSN3P07498 182 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 TBPP20226 339 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 RND3P61587 244 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 DCTN2Q13561 401 aaKnown RBP10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 EXOSC2Q13868 293 aaKnown RBP10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 RNASE12Q5GAN4 147 aaKnown RBP10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 ADAMTSL5Q6ZMM2 481 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 TBC1D26Q86UD7 250 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 SLC38A6Q8IZM9 456 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 ARRDC1Q8N5I2 433 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 TMEM229BQ8NBD8 167 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 OR10W1Q8NGF6 305 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 OR9G4Q8NGQ1 327 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 MRGPRFQ96AM1 343 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 SEC22AQ96IW7 307 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 OR4C12Q96R67 309 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 ELOVL1Q9BW60 279 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 NXF2Q9GZY0 626 aaKnown RBP10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 NDUFA4L2Q9NRX3 87 aa10.72□□□□□ -0.69
RTFDC1-204ENST00000449062 HUWE1Q7Z6Z7 4374 aaKnown RBP10.71□□□□□ -0.69
RTFDC1-204ENST00000449062 DBX1A6NMT0 343 aa10.71□□□□□ -0.69
RTFDC1-204ENST00000449062 CTDSPLO15194 276 aa10.71□□□□□ -0.69
RTFDC1-204ENST00000449062 REG1AP05451 166 aa10.71□□□□□ -0.69
RTFDC1-204ENST00000449062 G6PCP35575 357 aa10.71□□□□□ -0.69
RTFDC1-204ENST00000449062 SSBP1Q04837 148 aaKnown RBP10.71□□□□□ -0.69
RTFDC1-204ENST00000449062 WT1-ASQ06250 92 aa10.71□□□□□ -0.69
RTFDC1-204ENST00000449062 RNASE10Q5GAN6 216 aaKnown RBP10.71□□□□□ -0.69
RTFDC1-204ENST00000449062 Q8N1Y9 231 aa10.71□□□□□ -0.69
RTFDC1-204ENST00000449062 DMBX1Q8NFW5 382 aa10.71□□□□□ -0.69
RTFDC1-204ENST00000449062 TERB2Q8NHR7 220 aa10.71□□□□□ -0.69
RTFDC1-204ENST00000449062 ISOC1Q96CN7 298 aa10.71□□□□□ -0.69
RTFDC1-204ENST00000449062 CCDC140Q96MF4 163 aa10.71□□□□□ -0.69
RTFDC1-204ENST00000449062 QTRT1Q9BXR0 403 aaKnown RBP10.71□□□□□ -0.69
RTFDC1-204ENST00000449062 COMMD5Q9GZQ3 224 aa10.71□□□□□ -0.69
RTFDC1-204ENST00000449062 NBEAL2Q6ZNJ1 2754 aa10.7□□□□□ -0.7
RTFDC1-204ENST00000449062 DPPA5A6NC42 116 aa10.7□□□□□ -0.7
RTFDC1-204ENST00000449062 RGS5O15539 181 aa10.7□□□□□ -0.7
RTFDC1-204ENST00000449062 TRAPPC2P0DI81 140 aa10.7□□□□□ -0.7
RTFDC1-204ENST00000449062 TRAPPC2BP0DI82 140 aa10.7□□□□□ -0.7
RTFDC1-204ENST00000449062 HIST1H1BP16401 226 aaKnown RBP10.7□□□□□ -0.7
RTFDC1-204ENST00000449062 MRPS10P82664 201 aaKnown RBP10.7□□□□□ -0.7
RTFDC1-204ENST00000449062 HAPLN4Q86UW8 402 aa10.7□□□□□ -0.7
RTFDC1-204ENST00000449062 OR6Q1Q8NGQ2 317 aa10.7□□□□□ -0.7
RTFDC1-204ENST00000449062 OR1L8Q8NGR8 309 aa10.7□□□□□ -0.7
RTFDC1-204ENST00000449062 SMIM4Q8WVI0 70 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms