RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	ZNF729	A6NN14	1252 aa	Predicted RBP	13.9	□□□□□ -0.18
TOM1-210	ENST00000449058		A8MXE2	369 aa		13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	PPP5D1	E7EU14	171 aa		13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	CD99	P14209	185 aa		13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	NPY1R	P25929	384 aa		13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	CD40	P25942	277 aa		13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	CST9LP1	Q5W188	147 aa		13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	SLC24A4	Q8NFF2	622 aa		13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	PCGF1	Q9BSM1	259 aa		13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	ASPM	Q8IZT6	3477 aa		13.9	□□□□□ -0.18
TOM1-210	ENST00000449058		K7EM74	188 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	CXorf1	O96002	111 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	TYMS	P04818	313 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	IL6R	P08887	468 aa	Predicted RBP	13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	FAM3B	P58499	235 aa	Predicted RBP	13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	TMEM30B	Q3MIR4	351 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	CDPF1	Q6NVV7	123 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	DEFB108B	Q8NET1	73 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	OR2T10	Q8NGZ9	312 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	FAM57A	Q8TBR7	257 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	CCL13	Q99616	98 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	DYSF	O75923	2080 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	TM4SF5	O14894	197 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	NDUFB4	O95168	129 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	FABP4	P15090	132 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	BTF3	P20290	206 aa	Known RBP	13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	BMP5	P22003	454 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	TNFSF4	P23510	183 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	DNLZ	Q5SXM8	178 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	FAM216B	Q8N7L0	139 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	DERL1	Q9BUN8	251 aa		13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	CNOT1	A5YKK6	2376 aa	Known RBP	13.89	□□□□□ -0.19
TOM1-210	ENST00000449058	COA6	Q5JTJ3	125 aa	Known RBP	13.88	□□□□□ -0.19
TOM1-210	ENST00000449058	TEX36	Q5VZQ5	186 aa		13.88	□□□□□ -0.19
TOM1-210	ENST00000449058	TEPP	Q6URK8	271 aa		13.88	□□□□□ -0.19
TOM1-210	ENST00000449058	TMEM183A	Q8IXX5	376 aa		13.88	□□□□□ -0.19
TOM1-210	ENST00000449058	NUP37	Q8NFH4	326 aa		13.88	□□□□□ -0.19
TOM1-210	ENST00000449058	HIST1H2BL	Q99880	126 aa		13.88	□□□□□ -0.19
TOM1-210	ENST00000449058		A0A1W2PPQ1	181 aa		13.88	□□□□□ -0.19
TOM1-210	ENST00000449058	MMP23A	O75900	390 aa		13.88	□□□□□ -0.19
TOM1-210	ENST00000449058	CA2	P00918	260 aa		13.88	□□□□□ -0.19
TOM1-210	ENST00000449058	KRTCAP3	Q53RY4	240 aa		13.88	□□□□□ -0.19
TOM1-210	ENST00000449058	SLC25A48	Q6ZT89	311 aa	Known RBP	13.88	□□□□□ -0.19
TOM1-210	ENST00000449058	SSMEM1	Q8WWF3	244 aa		13.88	□□□□□ -0.19
TOM1-210	ENST00000449058	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.88	□□□□□ -0.19
TOM1-210	ENST00000449058	DMXL1	Q9Y485	3027 aa		13.87	□□□□□ -0.19
TOM1-210	ENST00000449058	FNDC10	F2Z333	226 aa		13.87	□□□□□ -0.19
TOM1-210	ENST00000449058	CCKAR	P32238	428 aa		13.87	□□□□□ -0.19
TOM1-210	ENST00000449058	ENY2	Q9NPA8	101 aa		13.87	□□□□□ -0.19
TOM1-210	ENST00000449058	OR51B2	Q9Y5P1	312 aa		13.87	□□□□□ -0.19
TOM1-210	ENST00000449058	CHRNA7	P36544	502 aa		13.87	□□□□□ -0.19
TOM1-210	ENST00000449058	RPL29	P47914	159 aa	Known RBP	13.87	□□□□□ -0.19
TOM1-210	ENST00000449058	GNG10	P50151	68 aa		13.87	□□□□□ -0.19
TOM1-210	ENST00000449058	EFNB3	Q15768	340 aa		13.87	□□□□□ -0.19
TOM1-210	ENST00000449058	CLEC12B	Q2HXU8	276 aa		13.87	□□□□□ -0.19
TOM1-210	ENST00000449058	ACTL10	Q5JWF8	245 aa		13.87	□□□□□ -0.19
TOM1-210	ENST00000449058	STPG3	Q8N7X2	389 aa		13.87	□□□□□ -0.19
TOM1-210	ENST00000449058	PRND	Q9UKY0	176 aa		13.87	□□□□□ -0.19
TOM1-210	ENST00000449058	ZNF257	Q9Y2Q1	563 aa		13.87	□□□□□ -0.19
TOM1-210	ENST00000449058	PLCE1	Q9P212	2302 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	TRAV20	A0A0B4J274	112 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	CT45A6	P0DMU7	189 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	CT45A5	P0DMU8	189 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	CT45A7	P0DMV0	189 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	MYOD1	P15172	320 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	HIST1H1B	P16401	226 aa	Known RBP	13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	NUBP1	P53384	320 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	LCN2	P80188	198 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	KCNIP4	Q6PIL6	250 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	CISD2	Q8N5K1	135 aa	Known RBP	13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	ZNF114	Q8NC26	417 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	OR5T1	Q8NG75	326 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	NEUROG1	Q92886	237 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	PACRG	Q96M98	296 aa	Predicted RBP	13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	TRBV20OR9-2	A0A075B6H5	130 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	PRR20E	P86478	221 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	PRR20C	P86479	221 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	PRR20D	P86480	221 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	PRR20B	P86481	221 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	PRR20A	P86496	221 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	OR1P1	Q8NH06	330 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	IMMP2L	Q96T52	175 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	PRDM13	Q9H4Q3	707 aa		13.86	□□□□□ -0.19
TOM1-210	ENST00000449058	UPK2	O00526	184 aa		13.85	□□□□□ -0.19
TOM1-210	ENST00000449058	IRF2	P14316	349 aa		13.85	□□□□□ -0.19
TOM1-210	ENST00000449058	GCHFR	P30047	84 aa		13.85	□□□□□ -0.19
TOM1-210	ENST00000449058	RHOB	P62745	196 aa		13.85	□□□□□ -0.19
TOM1-210	ENST00000449058	RAB31	Q13636	194 aa		13.85	□□□□□ -0.19
TOM1-210	ENST00000449058	TMEM144	Q7Z5S9	345 aa		13.85	□□□□□ -0.19
TOM1-210	ENST00000449058	SNRNP40	Q96DI7	357 aa	Known RBP	13.85	□□□□□ -0.19
TOM1-210	ENST00000449058	ACY3	Q96HD9	319 aa		13.85	□□□□□ -0.19
TOM1-210	ENST00000449058	SEPSECS	Q9HD40	501 aa	Known RBP	13.85	□□□□□ -0.19
TOM1-210	ENST00000449058	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.85	□□□□□ -0.19
TOM1-210	ENST00000449058	PRCD	Q00LT1	54 aa		13.85	□□□□□ -0.19
TOM1-210	ENST00000449058	SPATA31B1P	Q5VZV4	182 aa		13.85	□□□□□ -0.19
TOM1-210	ENST00000449058	PFDN5	Q99471	154 aa		13.85	□□□□□ -0.19
TOM1-210	ENST00000449058	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.85	□□□□□ -0.19
TOM1-210	ENST00000449058	LINC00312	Q9Y6C7	94 aa		13.85	□□□□□ -0.19
TOM1-210	ENST00000449058	ICE1	Q9Y2F5	2266 aa		13.84	□□□□□ -0.19

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