RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 RAB12Q6IQ22 244 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 GAGE2AQ6NT46 116 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 ASCL4Q6XD76 172 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 UBE2DNLQ8IWF7 75 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 ARHGAP24Q8N264 748 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 ZNF485Q8NCK3 441 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 OR10K1Q8NGX5 313 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 OR11H2Q8NH07 326 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 IL4I1Q96RQ9 567 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 SPAG8Q99932 426 aaPredicted RBP4.25□□□□□ -1.73
USP49-205ENST00000448078 WFDC10AQ9H1F0 79 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 IL36GQ9NZH8 169 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 MRPL27Q9P0M9 148 aaKnown RBP4.25□□□□□ -1.73
USP49-205ENST00000448078 GAGE2DQ9UEU5 116 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 APLNQ9ULZ1 77 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 UFC1Q9Y3C8 167 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 PEX16Q9Y5Y5 336 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 ERICH4A6NGS2 130 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 TMEM212A6NML5 194 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 J3QLW9 94 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 PRKYO43930 277 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 MRPS14O60783 128 aaKnown RBP4.24□□□□□ -1.73
USP49-205ENST00000448078 TSHBP01222 138 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 SAA2P0DJI9 122 aaPredicted RBP4.24□□□□□ -1.73
USP49-205ENST00000448078 CT45A6P0DMU7 189 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 CT45A5P0DMU8 189 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 CT45A7P0DMV0 189 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 RRASP10301 218 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 ZNF19P17023 458 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 CTRB1P17538 263 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 RPL35AP18077 110 aaKnown RBP4.24□□□□□ -1.73
USP49-205ENST00000448078 SERPINA2P20848 420 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 GALP22466 123 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 PPP1CCP36873 323 aaKnown RBP4.24□□□□□ -1.73
USP49-205ENST00000448078 EWSR1Q01844 656 aaKnown RBP eCLIP4.24□□□□□ -1.73
USP49-205ENST00000448078 MED21Q13503 144 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 RBMY1FQ15415 496 aaKnown RBP4.24□□□□□ -1.73
USP49-205ENST00000448078 VMA21Q3ZAQ7 101 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 SLC22A6Q4U2R8 563 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 TP53I3Q53FA7 332 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 AADACL4Q5VUY2 407 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 LIPKQ5VXJ0 399 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 CTRB2Q6GPI1 263 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 PDPNQ86YL7 162 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 TMEM61Q8N0U2 210 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 OR5AK2Q8NH90 309 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 IL1F10Q8WWZ1 152 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 NRBF2Q96F24 287 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 THTPAQ9BU02 230 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 NDUFAF3Q9BU61 184 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 RNF126Q9BV68 326 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 PARP12Q9H0J9 701 aaKnown RBP4.24□□□□□ -1.73
USP49-205ENST00000448078 C11orf68Q9H3H3 251 aaKnown RBP4.24□□□□□ -1.73
USP49-205ENST00000448078 C5orf66Q9H5L9 145 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 TMEM138Q9NPI0 162 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 CKLFQ9UBR5 152 aa4.24□□□□□ -1.73
USP49-205ENST00000448078 HECTD4Q9Y4D8 3996 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 IGHV4-4A0A075B6R2 117 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 H0YJW9 148 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 GABRPO00591 440 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 CTDSP2O14595 271 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 CYB5BO43169 146 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 CDRT1O95170 752 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 RCC1P18754 421 aaPredicted RBP4.23□□□□□ -1.73
USP49-205ENST00000448078 PRKACGP22612 351 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 ZBTB25P24278 435 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 CEACAM6P40199 344 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 GBX2P52951 348 aaPredicted RBP4.23□□□□□ -1.73
USP49-205ENST00000448078 PAFAH1B2P68402 229 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 TMEM187Q14656 261 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 RTL8BQ17RB0 113 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 LPCAT4Q643R3 524 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 DEFB107AQ8IZN7 70 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 ZNF383Q8NA42 475 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 OR10AC1Q8NH08 325 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 FAM46BQ96A09 425 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 EEF1AKMT3Q96AZ1 226 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 NEDD4LQ96PU5 975 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 RIMS4Q9H426 269 aaPredicted RBP4.23□□□□□ -1.73
USP49-205ENST00000448078 SMPD3Q9NY59 655 aaPredicted RBP4.23□□□□□ -1.73
USP49-205ENST00000448078 MGAT4AQ9UM21 535 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 DNAH10Q8IVF4 4471 aa4.23□□□□□ -1.73
USP49-205ENST00000448078 KMT2AQ03164 3969 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 SRRM2Q9UQ35 2752 aaKnown RBP4.22□□□□□ -1.73
USP49-205ENST00000448078 TEX13DA0A0J9YY54 714 aaPredicted RBP4.22□□□□□ -1.73
USP49-205ENST00000448078 EPM2AB3EWF7 344 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 DYNC1I1O14576 645 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 ITGB1BP1O14713 200 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 RTL8CO15255 209 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 DCTN3O75935 186 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 TRBV12-3P01733 135 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 DEFA4P12838 97 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 HIST1H1BP16401 226 aaKnown RBP4.22□□□□□ -1.73
USP49-205ENST00000448078 ADARB1P78563 741 aaKnown RBP4.22□□□□□ -1.73
USP49-205ENST00000448078 TNXAQ16473 311 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 C15orf32Q32M92 178 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 TMEM41BQ5BJD5 291 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 DDI2Q5TDH0 399 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 DMKNQ6E0U4 476 aaPredicted RBP4.22□□□□□ -1.73
USP49-205ENST00000448078 SSX6Q7RTT6 188 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms