RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 OR1N2Q8NGR9 330 aa16.04■□□□□ 0.16
HMGA1-205ENST00000447654 KLRF1Q9NZS2 232 aa16.04■□□□□ 0.16
HMGA1-205ENST00000447654 TTC28Q96AY4 2481 aa16.04■□□□□ 0.16
HMGA1-205ENST00000447654 OR5A1Q8NGJ0 315 aa16.03■□□□□ 0.16
HMGA1-205ENST00000447654 OR4C46A6NHA9 309 aa16.03■□□□□ 0.16
HMGA1-205ENST00000447654 DKK1O94907 266 aa16.03■□□□□ 0.16
HMGA1-205ENST00000447654 CA7P43166 264 aa16.03■□□□□ 0.16
HMGA1-205ENST00000447654 KIAA1644Q3SXP7 199 aa16.03■□□□□ 0.16
HMGA1-205ENST00000447654 SSBP4Q9BWG4 385 aaPredicted RBP16.03■□□□□ 0.16
HMGA1-205ENST00000447654 SAP30LQ9HAJ7 183 aa16.03■□□□□ 0.16
HMGA1-205ENST00000447654 C7orf71A4D174 169 aa16.02■□□□□ 0.16
HMGA1-205ENST00000447654 G3V3Y1 287 aa16.02■□□□□ 0.16
HMGA1-205ENST00000447654 J3QW42 95 aa16.02■□□□□ 0.16
HMGA1-205ENST00000447654 K7EP34 96 aa16.02■□□□□ 0.16
HMGA1-205ENST00000447654 CRYGSP22914 178 aa16.02■□□□□ 0.16
HMGA1-205ENST00000447654 PLA2G5P39877 138 aa16.02■□□□□ 0.16
HMGA1-205ENST00000447654 TNXAQ16473 311 aa16.02■□□□□ 0.16
HMGA1-205ENST00000447654 LPAL2Q16609 132 aa16.02■□□□□ 0.16
HMGA1-205ENST00000447654 FAM216AQ8WUB2 273 aa16.02■□□□□ 0.16
HMGA1-205ENST00000447654 WDR83OSQ9Y284 106 aa16.02■□□□□ 0.16
HMGA1-205ENST00000447654 SMIM27A0A1W2PRY6 76 aa16.02■□□□□ 0.15
HMGA1-205ENST00000447654 RPL31P62899 125 aaKnown RBP16.02■□□□□ 0.15
HMGA1-205ENST00000447654 ARF1P84077 181 aaKnown RBP16.02■□□□□ 0.15
HMGA1-205ENST00000447654 ZNF585BQ52M93 769 aa16.02■□□□□ 0.15
HMGA1-205ENST00000447654 Q8N7P7 452 aa16.02■□□□□ 0.15
HMGA1-205ENST00000447654 WFDC12Q8WWY7 111 aa16.02■□□□□ 0.15
HMGA1-205ENST00000447654 NABP1Q96AH0 204 aa16.02■□□□□ 0.15
HMGA1-205ENST00000447654 SIGMAR1Q99720 223 aa16.02■□□□□ 0.15
HMGA1-205ENST00000447654 CHRDL1Q9BU40 450 aa16.02■□□□□ 0.15
HMGA1-205ENST00000447654 SCRT2Q9NQ03 307 aa16.02■□□□□ 0.15
HMGA1-205ENST00000447654 KMT2EQ8IZD2 1858 aa16.01■□□□□ 0.15
HMGA1-205ENST00000447654 NCOA6Q14686 2063 aaPredicted RBP16.01■□□□□ 0.15
HMGA1-205ENST00000447654 LAMTOR5O43504 91 aa16.01■□□□□ 0.15
HMGA1-205ENST00000447654 ZFAND5O76080 213 aa16.01■□□□□ 0.15
HMGA1-205ENST00000447654 HAND1O96004 215 aa16.01■□□□□ 0.15
HMGA1-205ENST00000447654 SSTR5P35346 364 aa16.01■□□□□ 0.15
HMGA1-205ENST00000447654 ZXDAP98168 799 aa16.01■□□□□ 0.15
HMGA1-205ENST00000447654 PCOLCEQ15113 449 aa16.01■□□□□ 0.15
HMGA1-205ENST00000447654 PEAR1Q5VY43 1037 aaPredicted RBP16.01■□□□□ 0.15
HMGA1-205ENST00000447654 TMEM54Q969K7 222 aa16.01■□□□□ 0.15
HMGA1-205ENST00000447654 ZNF48Q96MX3 618 aaPredicted RBP16.01■□□□□ 0.15
HMGA1-205ENST00000447654 PLEK2Q9NYT0 353 aa16.01■□□□□ 0.15
HMGA1-205ENST00000447654 C9orf118A6NHY6 69 aa16■□□□□ 0.15
HMGA1-205ENST00000447654 H3BRM9 83 aa16■□□□□ 0.15
HMGA1-205ENST00000447654 NTN3O00634 580 aaPredicted RBP16■□□□□ 0.15
HMGA1-205ENST00000447654 ISLRO14498 428 aa16■□□□□ 0.15
HMGA1-205ENST00000447654 TMEM95Q3KNT9 176 aa16■□□□□ 0.15
HMGA1-205ENST00000447654 AP1S3Q96PC3 154 aa16■□□□□ 0.15
HMGA1-205ENST00000447654 TMEM191AQ9H0A3 160 aa16■□□□□ 0.15
HMGA1-205ENST00000447654 ASPMQ8IZT6 3477 aa16■□□□□ 0.15
HMGA1-205ENST00000447654 IZUMO1RA6ND01 250 aa16■□□□□ 0.15
HMGA1-205ENST00000447654 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16■□□□□ 0.15
HMGA1-205ENST00000447654 FKBP2P26885 142 aaKnown RBP16■□□□□ 0.15
HMGA1-205ENST00000447654 OPRK1P41145 380 aa16■□□□□ 0.15
HMGA1-205ENST00000447654 PDCD1Q15116 288 aa16■□□□□ 0.15
HMGA1-205ENST00000447654 SPSB4Q96A44 273 aa16■□□□□ 0.15
HMGA1-205ENST00000447654 OR2D2Q9H210 308 aa16■□□□□ 0.15
HMGA1-205ENST00000447654 PPIAL4EA0A075B759 164 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 PPIAL4CA0A0B4J2A2 164 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 PPIAL4DF5H284 164 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 GNG7O60262 68 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 KLF7O75840 302 aaPredicted RBP15.99■□□□□ 0.15
HMGA1-205ENST00000447654 ARL14EPLP0DKL9 152 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 PPIAL4FP0DN26 164 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 FGF12P61328 243 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 C1orf210Q8IVY1 113 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 OR10W1Q8NGF6 305 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 TMEM45BQ96B21 275 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 METTL7AQ9H8H3 244 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 ZNF331Q9NQX6 463 aaPredicted RBP15.99■□□□□ 0.15
HMGA1-205ENST00000447654 ERRFI1Q9UJM3 462 aaPredicted RBP15.99■□□□□ 0.15
HMGA1-205ENST00000447654 A0A1W2PR80 420 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 GPR183P32249 361 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 LINC00596Q86U02 117 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 FGFRL1Q8N441 504 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 ZNF611Q8N823 705 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 DEFB126Q9BYW3 111 aa15.99■□□□□ 0.15
HMGA1-205ENST00000447654 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.99■□□□□ 0.15
HMGA1-205ENST00000447654 TRAV38-1A0A0B4J264 116 aa15.98■□□□□ 0.15
HMGA1-205ENST00000447654 A0A1W2PNR3 127 aa15.98■□□□□ 0.15
HMGA1-205ENST00000447654 FAM231BA6NCW3 169 aa15.98■□□□□ 0.15
HMGA1-205ENST00000447654 TMEM108Q6UXF1 575 aa15.98■□□□□ 0.15
HMGA1-205ENST00000447654 SPACA9Q96E40 222 aaPredicted RBP15.98■□□□□ 0.15
HMGA1-205ENST00000447654 NPVFQ9HCQ7 196 aa15.98■□□□□ 0.15
HMGA1-205ENST00000447654 MTCH1Q9NZJ7 389 aa15.98■□□□□ 0.15
HMGA1-205ENST00000447654 C19orf25Q9UFG5 118 aaPredicted RBP15.98■□□□□ 0.15
HMGA1-205ENST00000447654 CHCHD2Q9Y6H1 151 aaPredicted RBP15.98■□□□□ 0.15
HMGA1-205ENST00000447654 OR2J3O76001 311 aa15.97■□□□□ 0.15
HMGA1-205ENST00000447654 P0C879 139 aa15.97■□□□□ 0.15
HMGA1-205ENST00000447654 GATA2P23769 480 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-205ENST00000447654 GPM6AP51674 278 aa15.97■□□□□ 0.15
HMGA1-205ENST00000447654 IL11RAQ14626 422 aa15.97■□□□□ 0.15
HMGA1-205ENST00000447654 Q5PR19 223 aa15.97■□□□□ 0.15
HMGA1-205ENST00000447654 PLCXD3Q63HM9 321 aa15.97■□□□□ 0.15
HMGA1-205ENST00000447654 OR2AE1Q8NHA4 323 aa15.97■□□□□ 0.15
HMGA1-205ENST00000447654 TNFRSF19Q9NS68 423 aa15.97■□□□□ 0.15
HMGA1-205ENST00000447654 RTTNQ86VV8 2226 aa15.97■□□□□ 0.15
HMGA1-205ENST00000447654 IGLV3-32A0A0A0MS00 114 aa15.97■□□□□ 0.15
HMGA1-205ENST00000447654 LRRC30A6NM36 301 aa15.97■□□□□ 0.15
HMGA1-205ENST00000447654 SMPD2O60906 423 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms