RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 OPN1MW2P0DN77 364 aa14.17□□□□□ -0.14
SMC6-206ENST00000446852 OPN1MW3P0DN78 364 aa14.17□□□□□ -0.14
SMC6-206ENST00000446852 C4orf17Q53FE4 359 aa14.17□□□□□ -0.14
SMC6-206ENST00000446852 TMEM177Q53S58 311 aa14.17□□□□□ -0.14
SMC6-206ENST00000446852 ZNF506Q5JVG8 444 aa14.17□□□□□ -0.14
SMC6-206ENST00000446852 HINT2Q9BX68 163 aa14.17□□□□□ -0.14
SMC6-206ENST00000446852 SLC24A4Q8NFF2 622 aa14.17□□□□□ -0.14
SMC6-206ENST00000446852 ZNF257Q9Y2Q1 563 aa14.17□□□□□ -0.14
SMC6-206ENST00000446852 MAP1LC3B2A6NCE7 125 aa14.16□□□□□ -0.14
SMC6-206ENST00000446852 KBTBD11O94819 623 aa14.16□□□□□ -0.14
SMC6-206ENST00000446852 SRP19P09132 144 aaKnown RBP14.16□□□□□ -0.14
SMC6-206ENST00000446852 FBP1P09467 338 aa14.16□□□□□ -0.14
SMC6-206ENST00000446852 FFAR4Q5NUL3 377 aa14.16□□□□□ -0.14
SMC6-206ENST00000446852 RXFP4Q8TDU9 374 aa14.16□□□□□ -0.14
SMC6-206ENST00000446852 MAP1LC3BQ9GZQ8 125 aa14.16□□□□□ -0.14
SMC6-206ENST00000446852 GNG13Q9P2W3 67 aa14.16□□□□□ -0.14
SMC6-206ENST00000446852 NPY1RP25929 384 aa14.16□□□□□ -0.14
SMC6-206ENST00000446852 PRCDQ00LT1 54 aa14.16□□□□□ -0.14
SMC6-206ENST00000446852 WDR25Q64LD2 544 aaPredicted RBP14.16□□□□□ -0.14
SMC6-206ENST00000446852 TREML4Q6UXN2 200 aa14.16□□□□□ -0.14
SMC6-206ENST00000446852 LHX4Q969G2 390 aa14.16□□□□□ -0.14
SMC6-206ENST00000446852 FLYWCH2Q96CP2 140 aaKnown RBP14.16□□□□□ -0.14
SMC6-206ENST00000446852 ASH1LQ9NR48 2969 aaKnown RBP14.15□□□□□ -0.14
SMC6-206ENST00000446852 IGHV2-26A0A0B4J1V2 119 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 TEX50A0A1B0GTY4 177 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 LOC102723971A0A1B0GUV8 181 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 SMCO3A2RU48 225 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 CA2P00918 260 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 IFNA4P05014 189 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 DTX2Q86UW9 622 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 TGIF2LXQ8IUE1 241 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 SLC25A22Q9H936 323 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 ENY2Q9NPA8 101 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 PPIAL4CA0A0B4J2A2 164 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 PPIAL4GP0DN37 164 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 DEFA4P12838 97 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 RAB11AP62491 216 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 PDPNQ86YL7 162 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 ZNF709Q8N972 641 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 OR8B3Q8NGG8 313 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 OR10G4Q8NGN3 311 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 OR10G9Q8NGN4 311 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 OR10G7Q8NGN6 311 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 OR8B2Q96RD0 313 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 GGACTQ9BVM4 153 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 NAV3Q8IVL0 2385 aa14.15□□□□□ -0.14
SMC6-206ENST00000446852 ZFP92A6NM28 416 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 IGLV1-47P01700 117 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 HSPB1P04792 205 aaKnown RBP14.14□□□□□ -0.15
SMC6-206ENST00000446852 DLK1P80370 383 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 AKIRIN2Q53H80 203 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 AWAT1Q58HT5 328 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 SOHLH1Q5JUK2 328 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 OR4C13Q8NGP0 309 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 C8orf46Q8TAG6 207 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 NEIL1Q96FI4 390 aaPredicted RBP14.14□□□□□ -0.15
SMC6-206ENST00000446852 C1orf159Q96HA4 380 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 PLEKHA3Q9HB20 300 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 PLXNB1O43157 2135 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 C17orf112F2Z3M2 114 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 HMGB3O15347 200 aaKnown RBP14.14□□□□□ -0.15
SMC6-206ENST00000446852 AKR1C3P42330 323 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 KHDC3LQ587J8 217 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 ARSJQ5FYB0 599 aaPredicted RBP14.14□□□□□ -0.15
SMC6-206ENST00000446852 CYB561D1Q8N8Q1 229 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 C20orf24Q9BUV8 137 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 SLC39A9Q9NUM3 307 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 MIOXQ9UGB7 285 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 WASHC3Q9Y3C0 194 aa14.14□□□□□ -0.15
SMC6-206ENST00000446852 LOC105371267A0A1B0GV96 52 aa14.13□□□□□ -0.15
SMC6-206ENST00000446852 C22orf46C9J442 243 aa14.13□□□□□ -0.15
SMC6-206ENST00000446852 C19orf84I3L1E1 186 aa14.13□□□□□ -0.15
SMC6-206ENST00000446852 IGLV2-23P01705 113 aa14.13□□□□□ -0.15
SMC6-206ENST00000446852 MBP02144 154 aa14.13□□□□□ -0.15
SMC6-206ENST00000446852 BCL2P10415 239 aa14.13□□□□□ -0.15
SMC6-206ENST00000446852 ATF4P18848 351 aaPredicted RBP14.13□□□□□ -0.15
SMC6-206ENST00000446852 NEU4Q8WWR8 484 aaPredicted RBP14.13□□□□□ -0.15
SMC6-206ENST00000446852 PCGF1Q9BSM1 259 aa14.13□□□□□ -0.15
SMC6-206ENST00000446852 TMEM8BA6NDV4 472 aa14.13□□□□□ -0.15
SMC6-206ENST00000446852 HLA-DRB5Q30154 266 aa14.13□□□□□ -0.15
SMC6-206ENST00000446852 OR5B3Q8NH48 314 aa14.13□□□□□ -0.15
SMC6-206ENST00000446852 RAB1CQ92928 201 aa14.13□□□□□ -0.15
SMC6-206ENST00000446852 RITA1Q96K30 269 aa14.13□□□□□ -0.15
SMC6-206ENST00000446852 MGST2Q99735 147 aa14.13□□□□□ -0.15
SMC6-206ENST00000446852 CTXND1A0A1B0GTU2 59 aa14.12□□□□□ -0.15
SMC6-206ENST00000446852 CEBPGP53567 150 aa14.12□□□□□ -0.15
SMC6-206ENST00000446852 GCSAMLQ5JQS6 135 aa14.12□□□□□ -0.15
SMC6-206ENST00000446852 FAM122CQ6P4D5 195 aa14.12□□□□□ -0.15
SMC6-206ENST00000446852 OR10W1Q8NGF6 305 aa14.12□□□□□ -0.15
SMC6-206ENST00000446852 TNFRSF14Q92956 283 aa14.12□□□□□ -0.15
SMC6-206ENST00000446852 TIMD4Q96H15 378 aa14.12□□□□□ -0.15
SMC6-206ENST00000446852 FKBP11Q9NYL4 201 aa14.12□□□□□ -0.15
SMC6-206ENST00000446852 FLNCQ14315 2725 aa14.12□□□□□ -0.15
SMC6-206ENST00000446852 IGHV3-72A0A0B4J1Y9 119 aa14.12□□□□□ -0.15
SMC6-206ENST00000446852 E7EUB6 86 aa14.12□□□□□ -0.15
SMC6-206ENST00000446852 MPDU1O75352 247 aa14.12□□□□□ -0.15
SMC6-206ENST00000446852 IL3RAP26951 378 aa14.12□□□□□ -0.15
SMC6-206ENST00000446852 RPL8P62917 257 aaKnown RBP14.12□□□□□ -0.15
SMC6-206ENST00000446852 LY6G5BQ8NDX9 201 aa14.12□□□□□ -0.15
SMC6-206ENST00000446852 CLEC7AQ9BXN2 247 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms