RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	KRTDAP	P60985	99 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	PDLIM3	Q53GG5	364 aa	Predicted RBP	10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	PRAMEF5	Q5TYX0	476 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312		Q6P435	159 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	LINC01551	Q86U37	167 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	GALM	Q96C23	342 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	NEIL1	Q96FI4	390 aa	Predicted RBP	10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	SAMD10	Q9BYL1	202 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	WDR54	Q9H977	334 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	MANBAL	Q9NQG1	85 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	CEP295	Q9C0D2	2601 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	APC2	O95996	2303 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	AHRR	A9YTQ3	701 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	CA1	P00915	261 aa	Predicted RBP	10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	HRAS	P01112	189 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	OR10J4	P0C629	311 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	OR9G9	P0C7N8	305 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	APELA	P0DMC3	54 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	COX5A	P20674	150 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	CDKN1A	P38936	164 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	UBE2N	P61088	152 aa	Known RBP	10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	SUMO1	P63165	101 aa	Known RBP	10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	ZNF90	Q03938	601 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	TMEM95	Q3KNT9	176 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	C6orf15	Q6UXA7	325 aa	Predicted RBP	10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	C20orf144	Q9BQM9	153 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	SH2D2A	Q9NP31	389 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	PILRB	Q9UKJ0	227 aa		10.47	□□□□□ -0.73
DDR1-238	ENST00000446312	RNF212B	A8MTL3	300 aa		10.46	□□□□□ -0.73
DDR1-238	ENST00000446312		M0R1X1	148 aa		10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	PMCH	P20382	165 aa		10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	ADM	P35318	185 aa		10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	CNN1	P51911	297 aa	Known RBP	10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	PPP1CB	P62140	327 aa		10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	PNRC1	Q12796	327 aa	Predicted RBP	10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	MLANA	Q16655	118 aa		10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	SMIM21	Q3B7S5	101 aa		10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	CYP2G1P	Q6ZSU1	146 aa		10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	BAGE3	Q86Y29	109 aa		10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	BAGE2	Q86Y30	109 aa		10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	COL5A1	P20908	1838 aa	Predicted RBP	10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	SH2D1B	O14796	132 aa		10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	NTF3	P20783	257 aa		10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	MEOX1	P50221	254 aa		10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	RNFT1	Q5M7Z0	435 aa		10.46	□□□□□ -0.73
DDR1-238	ENST00000446312	ASH1L	Q9NR48	2969 aa	Known RBP	10.46	□□□□□ -0.74
DDR1-238	ENST00000446312	TNFSF4	P23510	183 aa		10.46	□□□□□ -0.74
DDR1-238	ENST00000446312	PSG7	Q13046	419 aa		10.46	□□□□□ -0.74
DDR1-238	ENST00000446312	DHRS13	Q6UX07	377 aa		10.46	□□□□□ -0.74
DDR1-238	ENST00000446312	FAM216A	Q8WUB2	273 aa		10.46	□□□□□ -0.74
DDR1-238	ENST00000446312	MBD3L1	Q8WWY6	194 aa		10.46	□□□□□ -0.74
DDR1-238	ENST00000446312	SPSB4	Q96A44	273 aa		10.46	□□□□□ -0.74
DDR1-238	ENST00000446312	HSPB9	Q9BQS6	159 aa		10.46	□□□□□ -0.74
DDR1-238	ENST00000446312	SMDT1	Q9H4I9	107 aa		10.46	□□□□□ -0.74
DDR1-238	ENST00000446312	TRBV20OR9-2	A0A075B6H5	130 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	TRBV24-1	A0A075B6N3	115 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	CTXND1	A0A1B0GTU2	59 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	LRRC30	A6NM36	301 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	TIMM8A	O60220	97 aa	Predicted RBP	10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	STAG3L3	P0CL85	134 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	KITLG	P21583	273 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	RND2	P52198	227 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	BRWD1-AS2	P59051	145 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	COLCA1	Q6ZS62	124 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	ZNRF1	Q8ND25	227 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	ZNF703	Q9H7S9	590 aa	Predicted RBP	10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	IGHV2-70D	A0A0C4DH43	119 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	MDFIC2	A0A1B0GVS7	189 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	SERTM2	A0A1B0GWG4	89 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312		B4DEV8	164 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312		J3QT63	122 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	MGST1	P10620	155 aa	Known RBP	10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	SPATA45	Q537H7	98 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	SAMD13	Q5VXD3	122 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	MRPL54	Q6P161	138 aa	Known RBP	10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	DOLPP1	Q86YN1	238 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	SAXO1	Q8IYX7	474 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	TMEM147	Q9BVK8	224 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	RTL8A	Q9BWD3	113 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	ADAMTS20	P59510	1910 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	NBEAP1	P0C6P0	100 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	PMS2CL	Q68D20	193 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312	CMTM2	Q8TAZ6	248 aa		10.45	□□□□□ -0.74
DDR1-238	ENST00000446312		Q6ZSR3	168 aa		10.44	□□□□□ -0.74
DDR1-238	ENST00000446312	FAM19A2	Q8N3H0	131 aa		10.44	□□□□□ -0.74
DDR1-238	ENST00000446312	OCC1	Q8TAD7	63 aa		10.44	□□□□□ -0.74
DDR1-238	ENST00000446312	TMEM106B	Q9NUM4	274 aa		10.44	□□□□□ -0.74
DDR1-238	ENST00000446312	ZNF586	Q9NXT0	402 aa		10.44	□□□□□ -0.74
DDR1-238	ENST00000446312	B4GALT7	Q9UBV7	327 aa		10.44	□□□□□ -0.74
DDR1-238	ENST00000446312	ZNF891	A8MT65	544 aa	Predicted RBP	10.44	□□□□□ -0.74
DDR1-238	ENST00000446312	SERF2	P84101	59 aa		10.44	□□□□□ -0.74
DDR1-238	ENST00000446312	SPRN	Q5BIV9	151 aa		10.44	□□□□□ -0.74
DDR1-238	ENST00000446312	TRIB1	Q96RU8	372 aa		10.44	□□□□□ -0.74
DDR1-238	ENST00000446312	SSBP3	Q9BWW4	388 aa	Predicted RBP	10.44	□□□□□ -0.74
DDR1-238	ENST00000446312	TP73-AS1	Q9UF72	201 aa		10.44	□□□□□ -0.74
DDR1-238	ENST00000446312	COL12A1	Q99715	3063 aa		10.43	□□□□□ -0.74
DDR1-238	ENST00000446312	IGHV2OR16-5	A0A0B4J2B6	119 aa		10.43	□□□□□ -0.74
DDR1-238	ENST00000446312	PLAU	P00749	431 aa		10.43	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms