RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SEBOXQ9HB31 216 aaPredicted RBP13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 TMEM106BQ9NUM4 274 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 LAMP3Q9UQV4 416 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 SHISA9B4DS77 424 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 CGB3P0DN86 165 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 CGB7P0DN87 165 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 DIAPH2-AS1Q14236 149 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 DMRTA1Q5VZB9 504 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 LHX4Q969G2 390 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 SLC39A9Q9NUM3 307 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 SSUH2Q9Y2M2 353 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 HRNRQ86YZ3 2850 aaPredicted RBP13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 PKD1L2Q7Z442 2459 aa13.8□□□□□ -0.2
LAPTM4B-201ENST00000445593 C15orf62A8K5M9 175 aa13.8□□□□□ -0.2
LAPTM4B-201ENST00000445593 RNF151Q2KHN1 245 aa13.8□□□□□ -0.2
LAPTM4B-201ENST00000445593 FAM24BQ8N5W8 94 aa13.8□□□□□ -0.2
LAPTM4B-201ENST00000445593 FAM122AQ96E09 287 aa13.8□□□□□ -0.2
LAPTM4B-201ENST00000445593 EREGO14944 169 aa13.8□□□□□ -0.2
LAPTM4B-201ENST00000445593 LY6DQ14210 128 aa13.8□□□□□ -0.2
LAPTM4B-201ENST00000445593 ZNF674Q2M3X9 581 aa13.8□□□□□ -0.2
LAPTM4B-201ENST00000445593 TMEM147Q9BVK8 224 aa13.8□□□□□ -0.2
LAPTM4B-201ENST00000445593 PARD6GQ9BYG4 376 aaPredicted RBP13.8□□□□□ -0.2
LAPTM4B-201ENST00000445593 TRAV38-1A0A0B4J264 116 aa13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 hADV38S2A0JD32 116 aa13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 SRP19P09132 144 aaKnown RBP13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 OR4A47Q6IF82 309 aa13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 OR4S2Q8NH73 311 aa13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 JKAMPQ9P055 326 aa13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 H3BQ15 152 aa13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 ZNF709Q8N972 641 aa13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 SMCO4Q9NRQ5 59 aa13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 CISD1Q9NZ45 108 aaKnown RBP13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 CACNA1BQ00975 2339 aa13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 SPG11Q96JI7 2443 aa13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 PMS2P5A8MQ11 134 aa13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 TMEM178BH3BS89 294 aa13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 RELBQ01201 579 aa13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 ZCCHC14Q8WYQ9 949 aaKnown RBP13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 PATZ1Q9HBE1 687 aaKnown RBP13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 CTSZQ9UBR2 303 aa13.79□□□□□ -0.2
LAPTM4B-201ENST00000445593 TSTD3H0UI37 97 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 RAB7AP51149 207 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 TMEM200BQ69YZ2 307 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 ZNF429Q86V71 674 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 OR10G4Q8NGN3 311 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 OR10G9Q8NGN4 311 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 OR10G7Q8NGN6 311 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 SSMEM1Q8WWF3 244 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 VKORC1Q9BQB6 163 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 TCF19Q9Y242 345 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 IGHV3-72A0A0B4J1Y9 119 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 COLCA2A8K830 154 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 DVL1O14640 695 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 CD3EP07766 207 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 PAX5Q02548 391 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 TMEM41BQ5BJD5 291 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 CIB3Q96Q77 187 aaPredicted RBP13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 NPCDR1Q9BY65 106 aa13.78□□□□□ -0.2
LAPTM4B-201ENST00000445593 HBE1P02100 147 aa13.77□□□□□ -0.2
LAPTM4B-201ENST00000445593 CR1LQ2VPA4 569 aa13.77□□□□□ -0.2
LAPTM4B-201ENST00000445593 PINX1Q96BK5 328 aaKnown RBP13.77□□□□□ -0.2
LAPTM4B-201ENST00000445593 RAB39BQ96DA2 213 aa13.77□□□□□ -0.2
LAPTM4B-201ENST00000445593 MRPL20Q9BYC9 149 aaKnown RBP13.77□□□□□ -0.2
LAPTM4B-201ENST00000445593 HIPK2Q9H2X6 1198 aa13.77□□□□□ -0.2
LAPTM4B-201ENST00000445593 NGBQ9NPG2 151 aa13.77□□□□□ -0.2
LAPTM4B-201ENST00000445593 SLC35D1Q9NTN3 355 aa13.77□□□□□ -0.2
LAPTM4B-201ENST00000445593 RPUSD1Q9UJJ7 312 aaKnown RBP13.77□□□□□ -0.2
LAPTM4B-201ENST00000445593 SRRM4A7MD48 611 aaKnown RBP13.77□□□□□ -0.21
LAPTM4B-201ENST00000445593 BATFQ16520 125 aa13.77□□□□□ -0.21
LAPTM4B-201ENST00000445593 Q5PR19 223 aa13.77□□□□□ -0.21
LAPTM4B-201ENST00000445593 ZNF714Q96N38 554 aa13.77□□□□□ -0.21
LAPTM4B-201ENST00000445593 PRDM13Q9H4Q3 707 aa13.77□□□□□ -0.21
LAPTM4B-201ENST00000445593 VSTM5A8MXK1 200 aa13.77□□□□□ -0.21
LAPTM4B-201ENST00000445593 PPIHO43447 177 aaKnown RBP13.77□□□□□ -0.21
LAPTM4B-201ENST00000445593 NDUFB3O43676 98 aa13.77□□□□□ -0.21
LAPTM4B-201ENST00000445593 TAGLN2P37802 199 aaKnown RBP13.77□□□□□ -0.21
LAPTM4B-201ENST00000445593 KIAA0141Q14154 515 aaPredicted RBP13.77□□□□□ -0.21
LAPTM4B-201ENST00000445593 GFI1BQ5VTD9 330 aa13.77□□□□□ -0.21
LAPTM4B-201ENST00000445593 TEX36Q5VZQ5 186 aa13.77□□□□□ -0.21
LAPTM4B-201ENST00000445593 C1orf87Q8N0U7 546 aa13.77□□□□□ -0.21
LAPTM4B-201ENST00000445593 GOLT1BQ9Y3E0 138 aa13.77□□□□□ -0.21
LAPTM4B-201ENST00000445593 ZFYVE26Q68DK2 2539 aa13.76□□□□□ -0.21
LAPTM4B-201ENST00000445593 C1QTNF9P0C862 333 aa13.76□□□□□ -0.21
LAPTM4B-201ENST00000445593 CT45A6P0DMU7 189 aa13.76□□□□□ -0.21
LAPTM4B-201ENST00000445593 CT45A5P0DMU8 189 aa13.76□□□□□ -0.21
LAPTM4B-201ENST00000445593 CT45A7P0DMV0 189 aa13.76□□□□□ -0.21
LAPTM4B-201ENST00000445593 ZNF343Q6P1L6 599 aa13.76□□□□□ -0.21
LAPTM4B-201ENST00000445593 OR13D1Q8NGV5 346 aa13.76□□□□□ -0.21
LAPTM4B-201ENST00000445593 HIST1H2BAQ96A08 127 aa13.76□□□□□ -0.21
LAPTM4B-201ENST00000445593 UBE2G2P60604 165 aa13.76□□□□□ -0.21
LAPTM4B-201ENST00000445593 MOB3BQ86TA1 216 aa13.76□□□□□ -0.21
LAPTM4B-201ENST00000445593 TCTEX1D1Q8N7M0 179 aa13.76□□□□□ -0.21
LAPTM4B-201ENST00000445593 OR10X1Q8NGY0 326 aa13.76□□□□□ -0.21
LAPTM4B-201ENST00000445593 DDB2Q92466 427 aa13.76□□□□□ -0.21
LAPTM4B-201ENST00000445593 ACACBO00763 2458 aa13.76□□□□□ -0.21
LAPTM4B-201ENST00000445593 BCL2P10415 239 aa13.75□□□□□ -0.21
LAPTM4B-201ENST00000445593 CD1BP29016 333 aa13.75□□□□□ -0.21
LAPTM4B-201ENST00000445593 OR5T1Q8NG75 326 aa13.75□□□□□ -0.21
LAPTM4B-201ENST00000445593 RPUSD4Q96CM3 377 aaKnown RBP13.75□□□□□ -0.21
LAPTM4B-201ENST00000445593 TMEM204Q9BSN7 226 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms