RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 C3orf85A0A1B0GTC6 90 aa11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 CCL24O00175 119 aa11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 DUS4LO95620 317 aaKnown RBP11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 KRASP01116 189 aa11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 TRGV3P03979 118 aa11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 SERPINE2P07093 398 aa11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 PI3P19957 117 aa11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 TPPP2P59282 170 aa11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 ZNF45Q02386 682 aa11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 LINC00482Q8N8I6 264 aa11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 ADAD2Q8NCV1 583 aaKnown RBP11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 RAX2Q96IS3 184 aa11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 SEC22AQ96IW7 307 aa11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 TSC22D3Q99576 134 aa11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 SRSF8Q9BRL6 282 aaKnown RBP11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 RTBDNQ9BSG5 229 aaPredicted RBP11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 COMMD5Q9GZQ3 224 aa11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 ZNF355PQ9NSJ1 428 aa11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 ZNF257Q9Y2Q1 563 aa11.68□□□□□ -0.54
CSNK1E-210ENST00000442216 NPIPB5A8MRT5 1133 aa11.67□□□□□ -0.54
CSNK1E-210ENST00000442216 TEX22C9J3V5 150 aa11.67□□□□□ -0.54
CSNK1E-210ENST00000442216 ATG12O94817 140 aa11.67□□□□□ -0.54
CSNK1E-210ENST00000442216 G6PCP35575 357 aa11.67□□□□□ -0.54
CSNK1E-210ENST00000442216 FHL3Q13643 280 aa11.67□□□□□ -0.54
CSNK1E-210ENST00000442216 C10orf55Q5SWW7 151 aa11.67□□□□□ -0.54
CSNK1E-210ENST00000442216 MRPL41Q8IXM3 137 aaKnown RBP11.67□□□□□ -0.54
CSNK1E-210ENST00000442216 RCC1LQ96I51 464 aaKnown RBP11.67□□□□□ -0.54
CSNK1E-210ENST00000442216 USMG5Q96IX5 58 aa11.67□□□□□ -0.54
CSNK1E-210ENST00000442216 MS4A10Q96PG2 267 aa11.67□□□□□ -0.54
CSNK1E-210ENST00000442216 C5orf66Q9H5L9 145 aa11.67□□□□□ -0.54
CSNK1E-210ENST00000442216 GNB4Q9HAV0 340 aa11.67□□□□□ -0.54
CSNK1E-210ENST00000442216 MCUBQ9NWR8 336 aa11.67□□□□□ -0.54
CSNK1E-210ENST00000442216 COA4Q9NYJ1 87 aa11.67□□□□□ -0.54
CSNK1E-210ENST00000442216 FKBP11Q9NYL4 201 aa11.67□□□□□ -0.54
CSNK1E-210ENST00000442216 TRAV3A0A0B4J244 114 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 E7EUB6 86 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 SNAPC5O75971 98 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 IGKV1-39P01597 117 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 IGKV1D-39P04432 117 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 LGALS1P09382 135 aaKnown RBP11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 UCP1P25874 307 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 OR2B8PP59922 312 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 KLK9Q2XQG4 91 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 SAMD5Q5TGI4 173 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 H2BFWTQ7Z2G1 175 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 HSD17B13Q7Z5P4 300 aaPredicted RBP11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 OR11H1Q8NG94 326 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 CASTOR1Q8WTX7 329 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 FYTTD1Q96QD9 318 aaKnown RBP11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 TP53RKQ96S44 253 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 MCRIP2Q9BUT9 160 aaKnown RBP11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 BATF3Q9NR55 127 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 KLK9Q9UKQ9 250 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 PRNDQ9UKY0 176 aa11.66□□□□□ -0.54
CSNK1E-210ENST00000442216 NBEAL1Q6ZS30 2694 aa11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 TRBV9A0A0B4J1U6 114 aa11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 C13orf42A0A1B0GVH6 325 aa11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 A0A1B0GW64 132 aa11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 CGB1A6NKQ9 187 aa11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 DHFRP00374 187 aa11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 CRYGCP07315 174 aa11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 OR8U8P0C7N1 319 aa11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 APELAP0DMC3 54 aa11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 ZNF616Q08AN1 781 aa11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 DEFB136Q30KP8 78 aa11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 OR1L8Q8NGR8 309 aa11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 OR5B3Q8NH48 314 aa11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 SLC25A21Q9BQT8 299 aaPredicted RBP11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 QTRT1Q9BXR0 403 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 GPR61Q9BZJ8 451 aa11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 NAA60Q9H7X0 242 aa11.65□□□□□ -0.54
CSNK1E-210ENST00000442216 TEX13DA0A0J9YY54 714 aaPredicted RBP11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 NAP1L6A6NFF2 107 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 HMX3A6NHT5 357 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 CRYM-AS1A6NIL9 109 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 FAM223BA6NKX1 122 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 C15orf61A6NNL5 157 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 TRAPPC2P0DI81 140 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 TRAPPC2BP0DI82 140 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 CTRB1P17538 263 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 PSMB6P28072 239 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 INPP1P49441 399 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 DHODHQ02127 395 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 BAK1Q16611 211 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 TRIQKQ629K1 86 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 ZNF57Q68EA5 555 aaPredicted RBP11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 CTRB2Q6GPI1 263 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 FAM223AQ8IWN6 122 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 OR1N2Q8NGR9 330 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 DPF1Q92782 380 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 GALNT14Q96FL9 552 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 SDHCQ99643 169 aaPredicted RBP11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 TMEM222Q9H0R3 208 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 NDUFA4L2Q9NRX3 87 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 TMEM14BQ9NUH8 114 aa11.64□□□□□ -0.55
CSNK1E-210ENST00000442216 TEX50A0A1B0GTY4 177 aa11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 CDS2O95674 445 aa11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 HSPB1P04792 205 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 OR5AC1P0C628 307 aa11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 MYOD1P15172 320 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms