RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 BHLHA15Q7RTS1 189 aaPredicted RBP13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 SFRP2Q96HF1 295 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 TCF19Q9Y242 345 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 PGPEP1LA6NFU8 196 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 TDGF1P3P51864 188 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 TRIP6Q15654 476 aaKnown RBP13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 OR4S2Q8NH73 311 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 TMEM208Q9BTX3 173 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 TRGV8A0A0C4DH27 118 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 MDFIC2A0A1B0GVS7 189 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 TNFSF13O75888 250 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 TMEM144Q7Z5S9 345 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 LRP11Q86VZ4 500 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 STARD4Q96DR4 205 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 OR2V2Q96R30 315 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 CALYQ9NYX4 217 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 TRAPPC1Q9Y5R8 145 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 AHRRA9YTQ3 701 aa13.62□□□□□ -0.23
SEMA3B-207ENST00000441915 RAB7AP51149 207 aa13.62□□□□□ -0.23
SEMA3B-207ENST00000441915 SRSF6Q13247 344 aaKnown RBP13.62□□□□□ -0.23
SEMA3B-207ENST00000441915 ALKBH2Q6NS38 261 aa13.62□□□□□ -0.23
SEMA3B-207ENST00000441915 IGFL2Q6UWQ7 119 aa13.62□□□□□ -0.23
SEMA3B-207ENST00000441915 ZNF114Q8NC26 417 aa13.62□□□□□ -0.23
SEMA3B-207ENST00000441915 SGMS2Q8NHU3 365 aa13.62□□□□□ -0.23
SEMA3B-207ENST00000441915 TET2Q6N021 2002 aaPredicted RBP13.62□□□□□ -0.23
SEMA3B-207ENST00000441915 GAGE1Q13065 139 aa13.62□□□□□ -0.23
SEMA3B-207ENST00000441915 PRSS8Q16651 343 aa13.62□□□□□ -0.23
SEMA3B-207ENST00000441915 FAM169BQ8N8A8 192 aa13.62□□□□□ -0.23
SEMA3B-207ENST00000441915 SSMEM1Q8WWF3 244 aa13.62□□□□□ -0.23
SEMA3B-207ENST00000441915 LSM4Q9Y4Z0 139 aaKnown RBP13.62□□□□□ -0.23
SEMA3B-207ENST00000441915 SLC25A15Q9Y619 301 aa13.62□□□□□ -0.23
SEMA3B-207ENST00000441915 C15orf61A6NNL5 157 aa13.61□□□□□ -0.23
SEMA3B-207ENST00000441915 TEPPQ6URK8 271 aa13.61□□□□□ -0.23
SEMA3B-207ENST00000441915 MRPL41Q8IXM3 137 aaKnown RBP13.61□□□□□ -0.23
SEMA3B-207ENST00000441915 DDB2Q92466 427 aa13.61□□□□□ -0.23
SEMA3B-207ENST00000441915 TMEM204Q9BSN7 226 aa13.61□□□□□ -0.23
SEMA3B-207ENST00000441915 TRBV20OR9-2A0A075B6H5 130 aa13.61□□□□□ -0.23
SEMA3B-207ENST00000441915 LINC00614P0C842 121 aa13.61□□□□□ -0.23
SEMA3B-207ENST00000441915 RPL15P61313 204 aaKnown RBP13.61□□□□□ -0.23
SEMA3B-207ENST00000441915 MSMPQ1L6U9 139 aa13.61□□□□□ -0.23
SEMA3B-207ENST00000441915 MOGAT3Q86VF5 341 aa13.61□□□□□ -0.23
SEMA3B-207ENST00000441915 RAB9BQ9NP90 201 aa13.61□□□□□ -0.23
SEMA3B-207ENST00000441915 DKK4Q9UBT3 224 aa13.61□□□□□ -0.23
SEMA3B-207ENST00000441915 SVILO95425 2214 aa13.6□□□□□ -0.23
SEMA3B-207ENST00000441915 SCO2A0A1W2PP80 73 aa13.6□□□□□ -0.23
SEMA3B-207ENST00000441915 CGAP01215 116 aa13.6□□□□□ -0.23
SEMA3B-207ENST00000441915 NPSP0C0P6 89 aa13.6□□□□□ -0.23
SEMA3B-207ENST00000441915 CCKARP32238 428 aa13.6□□□□□ -0.23
SEMA3B-207ENST00000441915 RAB31Q13636 194 aa13.6□□□□□ -0.23
SEMA3B-207ENST00000441915 SLC24A4Q8NFF2 622 aa13.6□□□□□ -0.23
SEMA3B-207ENST00000441915 ZFHX4Q86UP3 3567 aa13.6□□□□□ -0.23
SEMA3B-207ENST00000441915 ITGB1BP1O14713 200 aa13.6□□□□□ -0.23
SEMA3B-207ENST00000441915 IL6RP08887 468 aaPredicted RBP13.6□□□□□ -0.23
SEMA3B-207ENST00000441915 NPY1RP25929 384 aa13.6□□□□□ -0.23
SEMA3B-207ENST00000441915 RHOBP62745 196 aa13.6□□□□□ -0.23
SEMA3B-207ENST00000441915 LEAP2Q969E1 77 aa13.6□□□□□ -0.23
SEMA3B-207ENST00000441915 ENY2Q9NPA8 101 aa13.6□□□□□ -0.23
SEMA3B-207ENST00000441915 ELOVL5Q9NYP7 299 aa13.6□□□□□ -0.23
SEMA3B-207ENST00000441915 ZNF83P51522 516 aa13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 EFNB3Q15768 340 aa13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 ARSJQ5FYB0 599 aaPredicted RBP13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 C1orf229Q6ZS94 237 aaPredicted RBP13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 CHODLQ9H9P2 273 aa13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 SEPSECSQ9HD40 501 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 CBLN4Q9NTU7 201 aa13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 CFAP47Q6ZTR5 3102 aa13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 CADP27708 2225 aa13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 MT-CO2P00403 227 aa13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 HSPE1P61604 102 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 SPRNQ5BIV9 151 aa13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 OR4A47Q6IF82 309 aa13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 GBGT1Q8N5D6 347 aa13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 STPG3Q8N7X2 389 aa13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 C1orf159Q96HA4 380 aa13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 BDP1A6H8Y1 2624 aa13.59□□□□□ -0.23
SEMA3B-207ENST00000441915 SAA2-SAA4A0A096LPE2 208 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 SAA2P0DJI9 122 aaPredicted RBP13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 GCHFRP30047 84 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 TIMP3P35625 211 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 KLF3P57682 345 aaPredicted RBP13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 ERVFC1-1P60608 527 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 C17orf58Q2M2W7 97 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 CT45A1Q5HYN5 189 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 CT45A3Q8NHU0 189 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 OCC1Q8TAD7 63 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 TMEM14BQ9NUH8 114 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 FOXA2Q9Y261 457 aaPredicted RBP13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 YTHDF2Q9Y5A9 579 aaKnown RBP13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 M0R1B8 84 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 SPRY3O43610 288 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 LHBP01229 141 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 CGB3P0DN86 165 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 CGB7P0DN87 165 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 THBS3P49746 956 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 RPL31P62899 125 aaKnown RBP13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 IQCJQ1A5X6 159 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 TEX38Q6PEX7 206 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 OR10G8Q8NGN5 311 aa13.58□□□□□ -0.24
SEMA3B-207ENST00000441915 HNF1AP20823 631 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms