RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 VSIG8P0DPA2 414 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 INPP1P49441 399 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 RND3P61587 244 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 ZNF695Q8IW36 515 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 FGF11Q92914 225 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 LINC01587Q99440 93 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 MDFIQ99750 246 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 LINC00597Q9H2U6 94 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 MRPS16Q9Y3D3 137 aaKnown RBP8.62□□□□□ -1.03
SYNE2-206ENST00000441438 INSL5Q9Y5Q6 135 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 SCN2AQ99250 2005 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 VPS13AQ96RL7 3174 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 A0A0B4J2A0 478 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 BTCP35070 178 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 TMEM255AQ5JRV8 349 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 MRPL24Q96A35 216 aaKnown RBP8.62□□□□□ -1.03
SYNE2-206ENST00000441438 ZNF331Q9NQX6 463 aaPredicted RBP8.62□□□□□ -1.03
SYNE2-206ENST00000441438 SHPKQ9UHJ6 478 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 FANCMQ8IYD8 2048 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 SMKR1H3BMG3 65 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 APOOLQ6UXV4 268 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 ZNF615Q8N8J6 731 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 ELSPBP1Q96BH3 223 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 RNF7Q9UBF6 113 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 BRWD1Q9NSI6 2320 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 C10orf142B7Z368 130 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 FCN1O00602 326 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 IGKV1D-16P01601 117 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 TPPP2P59282 170 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 ZNF726P1Q15940 193 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 SAXO1Q8IYX7 474 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 PSMF1Q92530 271 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 KCTD12Q96CX2 325 aaKnown RBP8.61□□□□□ -1.03
SYNE2-206ENST00000441438 DCTN5Q9BTE1 182 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 CLCF1Q9UBD9 225 aa8.61□□□□□ -1.03
SYNE2-206ENST00000441438 CCL21O00585 134 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 LYPD3O95274 346 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 NDUFV3P56181 108 aaKnown RBP8.6□□□□□ -1.03
SYNE2-206ENST00000441438 PIP4P1Q86T03 277 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 SUMF2Q8NBJ7 301 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 APOBEC4Q8WW27 367 aaKnown RBP8.6□□□□□ -1.03
SYNE2-206ENST00000441438 CHST6Q9GZX3 395 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 SEC61A2Q9H9S3 476 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 PARP11Q9NR21 331 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 TNRC6BQ9UPQ9 1833 aaKnown RBP8.6□□□□□ -1.03
SYNE2-206ENST00000441438 TEX48A0A1B0GUV7 120 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 FAM90A26D6RGX4 464 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 TAX1BP3O14907 124 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 CCR2P41597 374 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 KIR2DS2P43631 304 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 FABP6P51161 128 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 TSPO2Q5TGU0 170 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 FRG2Q64ET8 278 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 ZNF57Q68EA5 555 aaPredicted RBP8.6□□□□□ -1.03
SYNE2-206ENST00000441438 LINC00482Q8N8I6 264 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 DCAF4L2Q8NA75 395 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 OR51T1Q8NGJ9 327 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 DDB2Q92466 427 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 SPIN2AQ99865 258 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 SPIN2BQ9BPZ2 258 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 PAM16Q9Y3D7 125 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 TRBV5-4A0A0C4DH59 114 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 ZC3H12DA2A288 527 aaKnown RBP8.6□□□□□ -1.03
SYNE2-206ENST00000441438 RPL18AQ02543 176 aaKnown RBP8.6□□□□□ -1.03
SYNE2-206ENST00000441438 GAGE2BQ13066 116 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 LRRC37A5PQ49AS3 106 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 GAGE2EQ4V326 116 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 OR2T2Q6IF00 324 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 GAGE2AQ6NT46 116 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 TEX43Q6ZNM6 134 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 PRR22Q8IZ63 422 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 FMC1Q96HJ9 113 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 GAGE2DQ9UEU5 116 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 ZNF222Q9UK12 451 aa8.6□□□□□ -1.03
SYNE2-206ENST00000441438 TTC28Q96AY4 2481 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 A1L4Q6 167 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 NCBP2LA6PVI3 153 aaKnown RBP8.59□□□□□ -1.03
SYNE2-206ENST00000441438 G3V3Q6 166 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 LMX1BO60663 402 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 HLA-DPB1P04440 258 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 TEX29Q8N6K0 151 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 EXOSC3Q9NQT5 275 aaKnown RBP8.59□□□□□ -1.03
SYNE2-206ENST00000441438 UQCR10Q9UDW1 63 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 NCOR1O75376 2440 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 NPIPB7O75200 414 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 STATHP02808 62 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 THBS3P49746 956 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 DIAPH2-AS1Q14236 149 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 ZNF550Q7Z398 422 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 HMGN2P46Q86SG4 172 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 OR2T33Q8NG76 320 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 OR2M3Q8NG83 312 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 OR4A5Q8NH83 315 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 LRRC61Q9BV99 259 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 FAM30AQ9NZY2 134 aa8.59□□□□□ -1.03
SYNE2-206ENST00000441438 WNT1P04628 370 aa8.58□□□□□ -1.04
SYNE2-206ENST00000441438 GLI4P10075 376 aa8.58□□□□□ -1.04
SYNE2-206ENST00000441438 RPS10P46783 165 aaKnown RBP8.58□□□□□ -1.04
SYNE2-206ENST00000441438 GSG1Q2KHT4 349 aa8.58□□□□□ -1.04
SYNE2-206ENST00000441438 FAM201AQ5SY85 155 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms